Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_000258                                                              21     229
NP_001035957                                                           21     229
XP_006721990                                                           21     229
XP_006721989                                                           21     229
XP_005258041                                                           21     229
XP_006721988                                                           21     229
XP_006721987                                                           21     229
XP_006721986                                                           21     229
XP_005258040                                                           21     229
XP_006721985                                                           21     229
NP_078966                                                              17    3301
XP_006723004                                                           17    3301
NP_001139669                                                           17    3301
NP_001136245                                                           17    4312
NP_001136239                                                           17    4312
NP_001136236                                                           17    4312
NP_001136238                                                           17    4312
NP_001136240                                                           17    4312
NP_001136235                                                           17    4312
NP_001136237                                                           17    4312
NP_149045                                                              17    4312
NP_004144                                                              17    4312
NP_001177748                                                           17    4312
NP_001177747                                                           17    4312
NP_001138776                                                           16    5631
NP_001229468                                                           16    5631
NP_054790                                                              16    5631
NP_031397                                                              16    5631
NP_079525                                                              16    5631
NP_060688                                                              16    5631
NP_001138777                                                           16    5631
XP_006723818                                                           16    5631
XP_006723817                                                           16    5631
XP_006723816                                                           16    5631
XP_006723815                                                           16    5631
XP_006723814                                                           16    5631
XP_006723813                                                           16    5631
XP_005260405                                                           16    5631
XP_006722976                                                           16    5631
XP_005260141                                                           16    5631
XP_005272271                                                           16    5631
XP_006717354                                                           16    5631
XP_005246148                                                           16    5631
XP_005246145                                                           16    5631
XP_006712675                                                           16    5631
NP_036336                                                              16    5631
NP_001029027                                                           16    7355
NP_064594                                                              16    7355
NP_001092108                                                           16    7355
NP_065961                                                              16    7355
NP_071937                                                              16    7355
NP_001158137                                                           16    7355
XP_006716134                                                           16    7355
XP_005264554                                                           16    7355
XP_005264553                                                           16    7355
XP_005264550                                                           16    7355
XP_005264549                                                           16    7355
XP_005264548                                                           16    7355
NP_666023                                                              15    9605
NP_001903                                                              15    9605
NP_001244900                                                           15    9605
NP_001244902                                                           15    9605
NP_001244901                                                           15    9605
NP_001981                                                              15    9605
NP_001231293                                                           15    9605
NP_001070962                                                           15    9605
NP_001248332                                                           15    9605
NP_002493                                                              15    9605
NP_001269491                                                           15    9605
NP_001269490                                                           15    9605
NP_001073948                                                           15    9605
NP_001275653                                                           15    9605
NP_001135906                                                           15    9605
NP_036347                                                              15    9605
NP_001269489                                                           15    9605
NP_002941                                                              15    9605
NP_001161076                                                           15    9605
NP_065116                                                              15    9605
NP_001171164                                                           15    9605
XP_005276341                                                           15    9605
XP_006725824                                                           15    9605
XP_006718026                                                           15    9605
XP_005270202                                                           15    9605
XP_006718025                                                           15    9605
XP_005270201                                                           15    9605
XP_006717932                                                           15    9605
XP_005269918                                                           15    9605
XP_005269917                                                           15    9605
XP_005251773                                                           15    9605
XP_005249982                                                           15    9605
XP_005248625                                                           15    9605
XP_006714732                                                           15    9605
XP_006710513                                                           15    9605
XP_006710512                                                           15    9605
XP_005276054                                                           15    9605
>NP_000258
          Length = 2818

 Score = 20.8 bits (42), Expect =   229
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    ATYPTVSQT 9
            ATYPTV QT
Sbjct: 2485 ATYPTVGQT 2493
>NP_001035957
          Length = 2839

 Score = 20.8 bits (42), Expect =   229
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    ATYPTVSQT 9
            ATYPTV QT
Sbjct: 2506 ATYPTVGQT 2514
>XP_006721990
          Length = 2823

 Score = 20.8 bits (42), Expect =   229
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    ATYPTVSQT 9
            ATYPTV QT
Sbjct: 2516 ATYPTVGQT 2524
>XP_006721989
          Length = 2823

 Score = 20.8 bits (42), Expect =   229
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    ATYPTVSQT 9
            ATYPTV QT
Sbjct: 2516 ATYPTVGQT 2524
>XP_005258041
          Length = 2836

 Score = 20.8 bits (42), Expect =   229
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    ATYPTVSQT 9
            ATYPTV QT
Sbjct: 2485 ATYPTVGQT 2493
>XP_006721988
          Length = 2846

 Score = 20.8 bits (42), Expect =   229
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    ATYPTVSQT 9
            ATYPTV QT
Sbjct: 2495 ATYPTVGQT 2503
>XP_006721987
          Length = 2849

 Score = 20.8 bits (42), Expect =   229
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    ATYPTVSQT 9
            ATYPTV QT
Sbjct: 2516 ATYPTVGQT 2524
>XP_006721986
          Length = 2854

 Score = 20.8 bits (42), Expect =   229
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    ATYPTVSQT 9
            ATYPTV QT
Sbjct: 2503 ATYPTVGQT 2511
>XP_005258040
          Length = 2857

 Score = 20.8 bits (42), Expect =   229
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    ATYPTVSQT 9
            ATYPTV QT
Sbjct: 2506 ATYPTVGQT 2514
>XP_006721985
          Length = 2867

 Score = 20.8 bits (42), Expect =   229
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    ATYPTVSQT 9
            ATYPTV QT
Sbjct: 2516 ATYPTVGQT 2524
>NP_078966
          Length = 14507

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2     TYPTVSQT 9
             T+PT+S+T
Sbjct: 11560 TFPTLSET 11567

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2     TYPTVSQT 9
             T PTVS+T
Sbjct: 10606 TIPTVSKT 10613

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1     ATYPTVSQT 9
             AT+PTV ++
Sbjct: 11332 ATFPTVPES 11340
>XP_006723004
          Length = 6443

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2    TYPTVSQT 9
            T+PT+S+T
Sbjct: 3474 TFPTLSET 3481

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2    TYPTVSQT 9
            T PTVS+T
Sbjct: 2520 TIPTVSKT 2527

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1    ATYPTVSQT 9
            AT+PTV ++
Sbjct: 3246 ATFPTVPES 3254
>NP_001139669
          Length = 7081

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   ATYPTVSQ 8
           ATY T+SQ
Sbjct: 844 ATYTTISQ 851
>NP_001136245
          Length = 1932

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1    ATYPTVSQT 9
            +T PTVS+T
Sbjct: 1649 STLPTVSRT 1657
>NP_001136239
          Length = 1915

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1    ATYPTVSQT 9
            +T PTVS+T
Sbjct: 1632 STLPTVSRT 1640
>NP_001136236
          Length = 1957

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1    ATYPTVSQT 9
            +T PTVS+T
Sbjct: 1674 STLPTVSRT 1682
>NP_001136238
          Length = 1952

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1    ATYPTVSQT 9
            +T PTVS+T
Sbjct: 1669 STLPTVSRT 1677
>NP_001136240
          Length = 1935

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1    ATYPTVSQT 9
            +T PTVS+T
Sbjct: 1652 STLPTVSRT 1660
>NP_001136235
          Length = 1962

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1    ATYPTVSQT 9
            +T PTVS+T
Sbjct: 1679 STLPTVSRT 1687
>NP_001136237
          Length = 1886

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1    ATYPTVSQT 9
            +T PTVS+T
Sbjct: 1603 STLPTVSRT 1611
>NP_149045
          Length = 1955

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1    ATYPTVSQT 9
            +T PTVS+T
Sbjct: 1672 STLPTVSRT 1680
>NP_004144
          Length = 861

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   YPTVSQT 9
           YPT+S+T
Sbjct: 813 YPTMSET 819
>NP_001177748
          Length = 856

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   YPTVSQT 9
           YPT+S+T
Sbjct: 808 YPTMSET 814
>NP_001177747
          Length = 861

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   YPTVSQT 9
           YPT+S+T
Sbjct: 813 YPTMSET 819
>NP_001138776
          Length = 1367

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2   TYPTVSQT 9
           TYP VS T
Sbjct: 342 TYPVVSVT 349
>NP_001229468
          Length = 1070

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   ATYPTVSQT 9
           A+ PTV+QT
Sbjct: 441 ASSPTVNQT 449
>NP_054790
          Length = 2063

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   ATYPTVSQT 9
           A+ PTV+QT
Sbjct: 441 ASSPTVNQT 449
>NP_031397
          Length = 726

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   PTVSQT 9
           PTVSQT
Sbjct: 188 PTVSQT 193
>NP_079525
          Length = 1180

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2   TYPTVSQT 9
           TYP VS T
Sbjct: 342 TYPVVSVT 349
>NP_060688
          Length = 1247

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   ATYPTVSQT 9
           A +P VSQT
Sbjct: 555 ALHPVVSQT 563
>NP_001138777
          Length = 1134

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2   TYPTVSQT 9
           TYP VS T
Sbjct: 296 TYPVVSVT 303
>XP_006723818
          Length = 1975

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   ATYPTVSQT 9
           A+ PTV+QT
Sbjct: 441 ASSPTVNQT 449
>XP_006723817
          Length = 2020

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   ATYPTVSQT 9
           A+ PTV+QT
Sbjct: 398 ASSPTVNQT 406
>XP_006723816
          Length = 2034

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   ATYPTVSQT 9
           A+ PTV+QT
Sbjct: 441 ASSPTVNQT 449
>XP_006723815
          Length = 2051

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   ATYPTVSQT 9
           A+ PTV+QT
Sbjct: 441 ASSPTVNQT 449
>XP_006723814
          Length = 2052

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   ATYPTVSQT 9
           A+ PTV+QT
Sbjct: 441 ASSPTVNQT 449
>XP_006723813
          Length = 2062

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   ATYPTVSQT 9
           A+ PTV+QT
Sbjct: 441 ASSPTVNQT 449
>XP_005260405
          Length = 2063

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   ATYPTVSQT 9
           A+ PTV+QT
Sbjct: 441 ASSPTVNQT 449
>XP_006722976
          Length = 1085

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2   TYPTVSQT 9
           TYP VS T
Sbjct: 342 TYPVVSVT 349
>XP_005260141
          Length = 1367

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2   TYPTVSQT 9
           TYP VS T
Sbjct: 342 TYPVVSVT 349
>XP_005272271
          Length = 725

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   PTVSQT 9
           PTVSQT
Sbjct: 188 PTVSQT 193
>XP_006717354
          Length = 726

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   PTVSQT 9
           PTVSQT
Sbjct: 188 PTVSQT 193
>XP_005246148
          Length = 1108

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   ATYPTVSQT 9
           A +P VSQT
Sbjct: 416 ALHPVVSQT 424
>XP_005246145
          Length = 1236

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   ATYPTVSQT 9
           A +P VSQT
Sbjct: 544 ALHPVVSQT 552
>XP_006712675
          Length = 1248

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   ATYPTVSQT 9
           A +P VSQT
Sbjct: 556 ALHPVVSQT 564
>NP_036336
          Length = 822

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   PTVSQT 9
           PTVSQT
Sbjct: 139 PTVSQT 144
>NP_001029027
          Length = 692

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1  ATYPTVS 7
          A YPT+S
Sbjct: 9  AEYPTIS 15
>NP_064594
          Length = 340

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   YPTVSQT 9
           YP V+QT
Sbjct: 333 YPVVTQT 339
>NP_001092108
          Length = 708

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   YPTVSQT 9
           +P+VSQT
Sbjct: 504 FPSVSQT 510
>NP_065961
          Length = 1934

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   TYPTVS 7
           TYPTV+
Sbjct: 341 TYPTVT 346
>NP_071937
          Length = 519

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   ATYPTVSQT 9
           AT+P+VS +
Sbjct: 131 ATFPSVSDS 139
>NP_001158137
          Length = 1950

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   TYPTVS 7
           TYPTV+
Sbjct: 341 TYPTVT 346
>XP_006716134
          Length = 1847

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   TYPTVS 7
           TYPTV+
Sbjct: 265 TYPTVT 270
>XP_005264554
          Length = 330

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   ATYPTVSQT 9
           AT+P+VS +
Sbjct: 131 ATFPSVSDS 139
>XP_005264553
          Length = 330

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   ATYPTVSQT 9
           AT+P+VS +
Sbjct: 131 ATFPSVSDS 139
>XP_005264550
          Length = 448

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   ATYPTVSQT 9
           AT+P+VS +
Sbjct: 131 ATFPSVSDS 139
>XP_005264549
          Length = 517

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   ATYPTVSQT 9
           AT+P+VS +
Sbjct: 131 ATFPSVSDS 139
>XP_005264548
          Length = 518

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   ATYPTVSQT 9
           AT+P+VS +
Sbjct: 131 ATFPSVSDS 139
>NP_666023
          Length = 333

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   ATYPTV 6
           A+YPTV
Sbjct: 328 ASYPTV 333
>NP_001903
          Length = 333

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   ATYPTV 6
           A+YPTV
Sbjct: 328 ASYPTV 333
>NP_001244900
          Length = 333

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   ATYPTV 6
           A+YPTV
Sbjct: 328 ASYPTV 333
>NP_001244902
          Length = 151

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   ATYPTV 6
           A+YPTV
Sbjct: 146 ASYPTV 151
>NP_001244901
          Length = 333

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   ATYPTV 6
           A+YPTV
Sbjct: 328 ASYPTV 333
>NP_001981
          Length = 573

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   ATYPTVSQT 9
           A YP  +QT
Sbjct: 106 AVYPQATQT 114
>NP_001231293
          Length = 1392

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 1    ATYPT 5
            ATYPT
Sbjct: 1278 ATYPT 1282
>NP_001070962
          Length = 900

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2  TYPTV 6
          TYPTV
Sbjct: 76 TYPTV 80
>NP_001248332
          Length = 899

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2  TYPTV 6
          TYPTV
Sbjct: 76 TYPTV 80
>NP_002493
          Length = 899

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2  TYPTV 6
          TYPTV
Sbjct: 76 TYPTV 80
>NP_001269491
          Length = 520

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1  ATYPTVSQT 9
          A YP  +QT
Sbjct: 53 AVYPQATQT 61
>NP_001269490
          Length = 527

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   ATYPTVSQT 9
           A YP  +QT
Sbjct: 106 AVYPQATQT 114
>NP_001073948
          Length = 1731

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 1    ATYPT 5
            ATYPT
Sbjct: 1591 ATYPT 1595
>NP_001275653
          Length = 899

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2  TYPTV 6
          TYPTV
Sbjct: 76 TYPTV 80
>NP_001135906
          Length = 863

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   YPTVSQT 9
           YP VSQ+
Sbjct: 225 YPNVSQS 231
>NP_036347
          Length = 916

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   YPTVSQT 9
           YP VSQ+
Sbjct: 225 YPNVSQS 231
>NP_001269489
          Length = 536

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   ATYPTVSQT 9
           A YP  +QT
Sbjct: 106 AVYPQATQT 114
>NP_002941
          Length = 607

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   YPTVSQT 9
           YPT +QT
Sbjct: 166 YPTKTQT 172
>NP_001161076
          Length = 642

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 2   TYPTVSQT 9
           ++PT+S T
Sbjct: 423 SFPTISST 430
>NP_065116
          Length = 666

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 2   TYPTVSQT 9
           ++PT+S T
Sbjct: 423 SFPTISST 430
>NP_001171164
          Length = 1705

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 1    ATYPT 5
            ATYPT
Sbjct: 1591 ATYPT 1595
>XP_005276341
          Length = 254

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   ATYPTVS 7
           A+YPT S
Sbjct: 162 ASYPTAS 168
>XP_006725824
          Length = 369

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 2  TYPTVS 7
          TYPT S
Sbjct: 32 TYPTTS 37
>XP_006718026
          Length = 552

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 2   TYPTVSQT 9
           ++PT+S T
Sbjct: 309 SFPTISST 316
>XP_005270202
          Length = 618

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 2   TYPTVSQT 9
           ++PT+S T
Sbjct: 375 SFPTISST 382
>XP_006718025
          Length = 645

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 2   TYPTVSQT 9
           ++PT+S T
Sbjct: 423 SFPTISST 430
>XP_005270201
          Length = 662

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 2   TYPTVSQT 9
           ++PT+S T
Sbjct: 419 SFPTISST 426
>XP_006717932
          Length = 858

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2  TYPTV 6
          TYPTV
Sbjct: 76 TYPTV 80
>XP_005269918
          Length = 900

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2  TYPTV 6
          TYPTV
Sbjct: 76 TYPTV 80
>XP_005269917
          Length = 900

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2  TYPTV 6
          TYPTV
Sbjct: 76 TYPTV 80
>XP_005251773
          Length = 333

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   ATYPTV 6
           A+YPTV
Sbjct: 328 ASYPTV 333
>XP_005249982
          Length = 254

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   ATYPTVS 7
           A+YPT S
Sbjct: 162 ASYPTAS 168
>XP_005248625
          Length = 1418

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 1    ATYPT 5
            ATYPT
Sbjct: 1278 ATYPT 1282
>XP_006714732
          Length = 1633

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 1    ATYPT 5
            ATYPT
Sbjct: 1493 ATYPT 1497
>XP_006710513
          Length = 474

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1  ATYPTVSQT 9
          A YP  +QT
Sbjct: 53 AVYPQATQT 61
>XP_006710512
          Length = 575

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   ATYPTVSQT 9
           A YP  +QT
Sbjct: 108 AVYPQATQT 116
>XP_005276054
          Length = 254

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   ATYPTVS 7
           A+YPT S
Sbjct: 162 ASYPTAS 168
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.301    0.108    0.293 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 569,424
Number of extensions: 961
Number of successful extensions: 99
Number of sequences better than 10000.0: 95
Number of HSP's gapped: 99
Number of HSP's successfully gapped: 99
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.4 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package