Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 20 390 XP_005262424 20 390 NP_001135993 17 3301 NP_001135991 17 3301 NP_071357 17 3301 NP_942144 17 3301 NP_001135992 17 3301 NP_612467 17 3301 NP_055417 17 4312 NP_001275925 16 5631 NP_001108479 16 5631 NP_001108480 16 5631 NP_001275926 16 5631 NP_919258 16 5631 XP_005262809 16 5631 XP_006714144 16 5631 XP_005262807 16 5631 XP_005262806 16 5631 NP_001276928 16 7355 NP_001276929 16 7355 NP_005375 16 7355 NP_001138626 16 7355 NP_055867 16 7355 NP_001364 16 7355 NP_064454 16 7355 NP_064493 16 7355 NP_001603 16 7355 NP_064492 16 7355 XP_005271667 16 7355 XP_006715735 16 7355 XP_005249722 16 7355 XP_006715734 16 7355 XP_006715733 16 7355 XP_006711798 16 7355 NP_001073901 15 9605 NP_059142 15 9605 NP_055792 15 9605 NP_115923 15 9605 NP_001277116 15 9605 NP_001158287 15 9605 NP_001158286 15 9605 NP_114404 15 9605 XP_006721394 15 9605 XP_006720144 15 9605 XP_005267473 15 9605 XP_005267472 15 9605 NP_542984 15 9605>NP_722576 Length = 3080 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ATQPISQLE 9 ATQPISQ+E Sbjct: 1170 ATQPISQVE 1178>XP_005262424 Length = 2875 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ATQPISQLE 9 ATQPISQ+E Sbjct: 965 ATQPISQVE 973>NP_001135993 Length = 611 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ATQPISQLE 9 +TQP+ +LE Sbjct: 252 STQPVDELE 260>NP_001135991 Length = 611 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ATQPISQLE 9 +TQP+ +LE Sbjct: 252 STQPVDELE 260>NP_071357 Length = 611 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ATQPISQLE 9 +TQP+ +LE Sbjct: 252 STQPVDELE 260>NP_942144 Length = 611 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ATQPISQLE 9 +TQP+ +LE Sbjct: 252 STQPVDELE 260>NP_001135992 Length = 611 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ATQPISQLE 9 +TQP+ +LE Sbjct: 252 STQPVDELE 260>NP_612467 Length = 357 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ATQPISQLE 9 +TQPIS L+ Sbjct: 320 STQPISSLD 328>NP_055417 Length = 1358 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TQPISQLE 9 TQPI Q+E Sbjct: 704 TQPIIQIE 711>NP_001275925 Length = 660 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ATQPISQ 7 +TQP+SQ Sbjct: 283 STQPVSQ 289>NP_001108479 Length = 528 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ATQPISQ 7 +TQP+SQ Sbjct: 151 STQPVSQ 157>NP_001108480 Length = 528 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ATQPISQ 7 +TQP+SQ Sbjct: 151 STQPVSQ 157>NP_001275926 Length = 528 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ATQPISQ 7 +TQP+SQ Sbjct: 151 STQPVSQ 157>NP_919258 Length = 749 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ATQPISQ 7 +TQP+SQ Sbjct: 372 STQPVSQ 378>XP_005262809 Length = 546 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ATQPISQ 7 +TQP+SQ Sbjct: 169 STQPVSQ 175>XP_006714144 Length = 749 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ATQPISQ 7 +TQP+SQ Sbjct: 372 STQPVSQ 378>XP_005262807 Length = 749 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ATQPISQ 7 +TQP+SQ Sbjct: 372 STQPVSQ 378>XP_005262806 Length = 767 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ATQPISQ 7 +TQP+SQ Sbjct: 390 STQPVSQ 396>NP_001276928 Length = 462 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ATQPIS 6 ATQPIS Sbjct: 452 ATQPIS 457>NP_001276929 Length = 462 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ATQPIS 6 ATQPIS Sbjct: 452 ATQPIS 457>NP_005375 Length = 462 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ATQPIS 6 ATQPIS Sbjct: 452 ATQPIS 457>NP_001138626 Length = 453 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ATQPISQLE 9 ATQ + QLE Sbjct: 345 ATQALKQLE 353>NP_055867 Length = 1606 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TQPISQL 8 +QP+SQL Sbjct: 808 SQPVSQL 814>NP_001364 Length = 4515 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ATQPISQLE 9 ATQ + QLE Sbjct: 345 ATQALKQLE 353>NP_064454 Length = 246 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QPISQLE 9 QP+S+LE Sbjct: 128 QPLSELE 134>NP_064493 Length = 195 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QPISQLE 9 QP+S+LE Sbjct: 58 QPLSELE 64>NP_001603 Length = 265 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QPISQLE 9 QP+S+LE Sbjct: 128 QPLSELE 134>NP_064492 Length = 210 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QPISQLE 9 QP+S+LE Sbjct: 73 QPLSELE 79>XP_005271667 Length = 225 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QPISQLE 9 QP+S+LE Sbjct: 128 QPLSELE 134>XP_006715735 Length = 1606 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TQPISQL 8 +QP+SQL Sbjct: 808 SQPVSQL 814>XP_005249722 Length = 1607 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TQPISQL 8 +QP+SQL Sbjct: 809 SQPVSQL 815>XP_006715734 Length = 1607 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TQPISQL 8 +QP+SQL Sbjct: 809 SQPVSQL 815>XP_006715733 Length = 1608 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TQPISQL 8 +QP+SQL Sbjct: 810 SQPVSQL 816>XP_006711798 Length = 4586 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ATQPISQLE 9 ATQ + QLE Sbjct: 345 ATQALKQLE 353>NP_001073901 Length = 505 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QPISQLE 9 QP++QLE Sbjct: 398 QPMAQLE 404>NP_059142 Length = 338 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 ATQPISQL 8 AT P SQL Sbjct: 28 ATSPASQL 35>NP_055792 Length = 1341 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ATQPISQLE 9 AT P+ QL+ Sbjct: 681 ATPPVPQLQ 689>NP_115923 Length = 1030 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 PISQLE 9 P+SQLE Sbjct: 723 PVSQLE 728>NP_001277116 Length = 1064 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 PISQLE 9 P+SQLE Sbjct: 757 PVSQLE 762>NP_001158287 Length = 1301 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ATQPISQLE 9 AT P+ QL+ Sbjct: 641 ATPPVPQLQ 649>NP_001158286 Length = 1328 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ATQPISQLE 9 AT P+ QL+ Sbjct: 681 ATPPVPQLQ 689>NP_114404 Length = 433 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ATQPISQL 8 ATQ +SQL Sbjct: 254 ATQALSQL 261>XP_006721394 Length = 715 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ATQPISQLE 9 AT+PI L+ Sbjct: 685 ATEPIGSLQ 693>XP_006720144 Length = 842 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ATQPISQLE 9 AT P+ QL+ Sbjct: 681 ATPPVPQLQ 689>XP_005267473 Length = 1329 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ATQPISQLE 9 AT P+ QL+ Sbjct: 681 ATPPVPQLQ 689>XP_005267472 Length = 1340 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ATQPISQLE 9 AT P+ QL+ Sbjct: 681 ATPPVPQLQ 689>NP_542984 Length = 353 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 ATQPISQL 8 AT P SQL Sbjct: 28 ATSPASQL 35Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.301 0.115 0.287 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 665,168 Number of extensions: 1144 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |