Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 20 390 NP_001075109 20 390 NP_001005210 17 2528 NP_808882 16 5631 NP_001137544 16 5631 XP_006720011 16 5631 XP_006720010 16 5631 NP_443165 16 7355 NP_078808 15 9605 NP_001020607 15 9605 NP_060264 15 9605 NP_690043 15 9605 NP_000780 15 9605 NP_001171528 15 9605 NP_001254726 15 9605 NP_758519 15 9605 NP_000751 15 9605 NP_724781 15 9605 NP_055630 15 9605 XP_005257931 15 9605 XP_005257930 15 9605 XP_005257929 15 9605 XP_006722270 15 9605 XP_006722269 15 9605 XP_005257928 15 9605 XP_006722268 15 9605 XP_005257927 15 9605 XP_006722267 15 9605 XP_006722266 15 9605 XP_006721800 15 9605 XP_005257167 15 9605 XP_005251551 15 9605 XP_006716857 15 9605 XP_006712810 15 9605 XP_006712809 15 9605 XP_006712808 15 9605 XP_005270552 15 9605 XP_005270550 15 9605 XP_005270549 15 9605 NP_001072986 15 9605>NP_008835 Length = 4128 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ATNFLLKMT 9 ATNFLL+MT Sbjct: 2558 ATNFLLEMT 2566>NP_001075109 Length = 4097 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ATNFLLKMT 9 ATNFLL+MT Sbjct: 2558 ATNFLLEMT 2566>NP_001005210 Length = 341 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ATNFLLKMT 9 ATNFLL +T Sbjct: 317 ATNFLLGIT 325>NP_808882 Length = 309 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ATNFLLK 7 ATNFLL+ Sbjct: 302 ATNFLLQ 308>NP_001137544 Length = 344 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ATNFLLK 7 ATNFLL+ Sbjct: 337 ATNFLLQ 343>XP_006720011 Length = 231 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ATNFLLK 7 ATNFLL+ Sbjct: 224 ATNFLLQ 230>XP_006720010 Length = 262 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ATNFLLK 7 ATNFLL+ Sbjct: 255 ATNFLLQ 261>NP_443165 Length = 275 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TNFLLKMT 9 T+F+LK+T Sbjct: 81 TSFMLKVT 88>NP_078808 Length = 631 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NFLLKM 8 NFL+KM Sbjct: 115 NFLIKM 120>NP_001020607 Length = 183 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NFLLKM 8 NFL+KM Sbjct: 115 NFLIKM 120>NP_060264 Length = 1801 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NFLLKM 8 NF+LKM Sbjct: 815 NFILKM 820>NP_690043 Length = 732 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NFLLKM 8 NFL+KM Sbjct: 476 NFLMKM 481>NP_000780 Length = 1306 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NFLLKM 8 NFL+KM Sbjct: 1050 NFLMKM 1055>NP_001171528 Length = 691 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NFLLKM 8 NFL+KM Sbjct: 476 NFLMKM 481>NP_001254726 Length = 976 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ATNFLLKMT 9 A FLLK+T Sbjct: 324 AFEFLLKLT 332>NP_758519 Length = 783 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ATNFLLK 7 AT FLLK Sbjct: 485 ATGFLLK 491>NP_000751 Length = 836 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ATNFLLK 7 AT FLLK Sbjct: 485 ATGFLLK 491>NP_724781 Length = 863 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ATNFLLK 7 AT FLLK Sbjct: 485 ATGFLLK 491>NP_055630 Length = 989 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ATNFLLKMT 9 A FLLK+T Sbjct: 337 AFEFLLKLT 345>XP_005257931 Length = 1014 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ATNFLLKMT 9 A FLLK+T Sbjct: 362 AFEFLLKLT 370>XP_005257930 Length = 1032 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ATNFLLKMT 9 A FLLK+T Sbjct: 381 AFEFLLKLT 389>XP_005257929 Length = 1033 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ATNFLLKMT 9 A FLLK+T Sbjct: 381 AFEFLLKLT 389>XP_006722270 Length = 1044 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ATNFLLKMT 9 A FLLK+T Sbjct: 337 AFEFLLKLT 345>XP_006722269 Length = 1044 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ATNFLLKMT 9 A FLLK+T Sbjct: 337 AFEFLLKLT 345>XP_005257928 Length = 1051 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ATNFLLKMT 9 A FLLK+T Sbjct: 356 AFEFLLKLT 364>XP_006722268 Length = 1051 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ATNFLLKMT 9 A FLLK+T Sbjct: 356 AFEFLLKLT 364>XP_005257927 Length = 1057 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ATNFLLKMT 9 A FLLK+T Sbjct: 362 AFEFLLKLT 370>XP_006722267 Length = 1069 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ATNFLLKMT 9 A FLLK+T Sbjct: 362 AFEFLLKLT 370>XP_006722266 Length = 1076 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ATNFLLKMT 9 A FLLK+T Sbjct: 381 AFEFLLKLT 389>XP_006721800 Length = 616 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NFLLKM 8 NFL+KM Sbjct: 360 NFLMKM 365>XP_005257167 Length = 1123 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NFLLKM 8 NFL+KM Sbjct: 867 NFLMKM 872>XP_005251551 Length = 1801 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NFLLKM 8 NF+LKM Sbjct: 815 NFILKM 820>XP_006716857 Length = 1834 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NFLLKM 8 NF+LKM Sbjct: 848 NFILKM 853>XP_006712810 Length = 321 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NFLLKM 8 NFL+KM Sbjct: 115 NFLIKM 120>XP_006712809 Length = 325 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NFLLKM 8 NFL+KM Sbjct: 115 NFLIKM 120>XP_006712808 Length = 347 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NFLLKM 8 NFL+KM Sbjct: 115 NFLIKM 120>XP_005270552 Length = 731 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ATNFLLK 7 AT FLLK Sbjct: 353 ATGFLLK 359>XP_005270550 Length = 835 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ATNFLLK 7 AT FLLK Sbjct: 485 ATGFLLK 491>XP_005270549 Length = 841 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ATNFLLK 7 AT FLLK Sbjct: 463 ATGFLLK 469>NP_001072986 Length = 976 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ATNFLLKMT 9 A FLLK+T Sbjct: 324 AFEFLLKLT 332Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.330 0.131 0.347 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 424,562 Number of extensions: 648 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |