Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005091 19 869 NP_653080 19 869 XP_005267292 19 869 XP_005267291 19 869 XP_005267290 19 869 NP_001269370 17 2528 NP_001269369 17 2528 NP_031379 17 2528 NP_001229854 17 3301 NP_055673 17 3301 XP_005245747 17 3301 XP_005245746 17 3301 XP_005245743 17 3301 XP_005245742 17 3301 XP_006711757 17 3301 XP_005245741 17 3301 NP_001186084 17 4312 NP_008998 17 4312 NP_001185708 17 4312 NP_003582 17 4312 NP_001185707 17 4312 NP_001185706 17 4312 NP_056083 16 5631 NP_037375 16 5631 XP_005247302 16 5631 NP_055679 16 7355 NP_001165124 15 9605 NP_055610 15 9605 NP_116165 15 9605 NP_001269877 15 9605 NP_003820 15 9605 NP_001248335 15 9605 NP_001248336 15 9605 XP_005269685 15 9605 XP_005269684 15 9605 XP_005269683 15 9605 XP_005269681 15 9605 XP_006717770 15 9605 XP_005269679 15 9605 XP_006716955 15 9605 XP_005251680 15 9605 XP_006716954 15 9605 XP_006716953 15 9605 XP_006716952 15 9605 XP_006716951 15 9605 XP_006716950 15 9605 XP_006716949 15 9605 XP_006716948 15 9605 XP_005251679 15 9605 XP_006712945 15 9605 XP_006712944 15 9605>NP_005091 Length = 1782 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ATKSAVDHD 9 ATKSAV HD Sbjct: 125 ATKSAVVHD 133>NP_653080 Length = 1684 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ATKSAVDHD 9 ATKSAV HD Sbjct: 27 ATKSAVVHD 35>XP_005267292 Length = 1677 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ATKSAVDHD 9 ATKSAV HD Sbjct: 20 ATKSAVVHD 28>XP_005267291 Length = 1684 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ATKSAVDHD 9 ATKSAV HD Sbjct: 27 ATKSAVVHD 35>XP_005267290 Length = 1782 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ATKSAVDHD 9 ATKSAV HD Sbjct: 125 ATKSAVVHD 133>NP_001269370 Length = 322 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ATKSAVDHD 9 ATK V+HD Sbjct: 148 ATKGIVEHD 156>NP_001269369 Length = 305 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ATKSAVDHD 9 ATK V+HD Sbjct: 131 ATKGIVEHD 139>NP_031379 Length = 381 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ATKSAVDHD 9 ATK V+HD Sbjct: 207 ATKGIVEHD 215>NP_001229854 Length = 631 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TKSAVDH 8 TK+A+DH Sbjct: 207 TKAAIDH 213>NP_055673 Length = 709 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TKSAVDH 8 TK+A+DH Sbjct: 285 TKAAIDH 291>XP_005245747 Length = 469 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TKSAVDH 8 TK+A+DH Sbjct: 45 TKAAIDH 51>XP_005245746 Length = 474 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TKSAVDH 8 TK+A+DH Sbjct: 50 TKAAIDH 56>XP_005245743 Length = 618 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TKSAVDH 8 TK+A+DH Sbjct: 285 TKAAIDH 291>XP_005245742 Length = 631 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TKSAVDH 8 TK+A+DH Sbjct: 207 TKAAIDH 213>XP_006711757 Length = 631 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TKSAVDH 8 TK+A+DH Sbjct: 207 TKAAIDH 213>XP_005245741 Length = 631 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TKSAVDH 8 TK+A+DH Sbjct: 207 TKAAIDH 213>NP_001186084 Length = 581 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TKSAVDHD 9 TK+ DHD Sbjct: 115 TKNTADHD 122>NP_008998 Length = 611 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TKSAVDHD 9 TK+ DHD Sbjct: 115 TKNTADHD 122>NP_001185708 Length = 758 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TKSAVDHD 9 T+SAVD D Sbjct: 681 TRSAVDED 688>NP_003582 Length = 745 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TKSAVDHD 9 T+SAVD D Sbjct: 668 TRSAVDED 675>NP_001185707 Length = 764 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TKSAVDHD 9 T+SAVD D Sbjct: 687 TRSAVDED 694>NP_001185706 Length = 745 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TKSAVDHD 9 T+SAVD D Sbjct: 668 TRSAVDED 675>NP_056083 Length = 2243 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KSAVDH 8 KSA+DH Sbjct: 192 KSAIDH 197>NP_037375 Length = 468 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ATKSAVDH 8 +TKS +DH Sbjct: 122 STKSGLDH 129>XP_005247302 Length = 2248 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KSAVDH 8 KSA+DH Sbjct: 192 KSAIDH 197>NP_055679 Length = 409 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ATKSAVDHD 9 A KSA+ HD Sbjct: 353 ALKSAMAHD 361>NP_001165124 Length = 1190 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ATKSAVDH 8 ATKS +D+ Sbjct: 497 ATKSIIDY 504>NP_055610 Length = 1214 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ATKSAVDH 8 ATKS +D+ Sbjct: 521 ATKSIIDY 528>NP_116165 Length = 2540 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TKSAVDH 8 TK+ VDH Sbjct: 947 TKTLVDH 953>NP_001269877 Length = 2358 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TKSAVDH 8 TK+ VDH Sbjct: 765 TKTLVDH 771>NP_003820 Length = 2041 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SAVDHD 9 SAV+HD Sbjct: 414 SAVEHD 419>NP_001248335 Length = 2037 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SAVDHD 9 SAV+HD Sbjct: 414 SAVEHD 419>NP_001248336 Length = 2008 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SAVDHD 9 SAV+HD Sbjct: 414 SAVEHD 419>XP_005269685 Length = 1700 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TKSAVDH 8 TK+ VDH Sbjct: 947 TKTLVDH 953>XP_005269684 Length = 2032 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TKSAVDH 8 TK+ VDH Sbjct: 947 TKTLVDH 953>XP_005269683 Length = 2252 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TKSAVDH 8 TK+ VDH Sbjct: 659 TKTLVDH 665>XP_005269681 Length = 2321 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TKSAVDH 8 TK+ VDH Sbjct: 728 TKTLVDH 734>XP_006717770 Length = 2358 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TKSAVDH 8 TK+ VDH Sbjct: 765 TKTLVDH 771>XP_005269679 Length = 2502 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TKSAVDH 8 TK+ VDH Sbjct: 909 TKTLVDH 915>XP_006716955 Length = 1099 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SAVDHD 9 SAV+HD Sbjct: 414 SAVEHD 419>XP_005251680 Length = 2000 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SAVDHD 9 SAV+HD Sbjct: 414 SAVEHD 419>XP_006716954 Length = 2008 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SAVDHD 9 SAV+HD Sbjct: 414 SAVEHD 419>XP_006716953 Length = 2031 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SAVDHD 9 SAV+HD Sbjct: 414 SAVEHD 419>XP_006716952 Length = 2037 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SAVDHD 9 SAV+HD Sbjct: 414 SAVEHD 419>XP_006716951 Length = 2041 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SAVDHD 9 SAV+HD Sbjct: 414 SAVEHD 419>XP_006716950 Length = 2070 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SAVDHD 9 SAV+HD Sbjct: 414 SAVEHD 419>XP_006716949 Length = 2070 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SAVDHD 9 SAV+HD Sbjct: 414 SAVEHD 419>XP_006716948 Length = 2070 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SAVDHD 9 SAV+HD Sbjct: 414 SAVEHD 419>XP_005251679 Length = 2070 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SAVDHD 9 SAV+HD Sbjct: 414 SAVEHD 419>XP_006712945 Length = 1214 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ATKSAVDH 8 ATKS +D+ Sbjct: 521 ATKSIIDY 528>XP_006712944 Length = 1214 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ATKSAVDH 8 ATKS +D+ Sbjct: 521 ATKSIIDY 528Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.301 0.111 0.297 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 423,287 Number of extensions: 443 Number of successful extensions: 51 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |