Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_002430 20 299 NP_631894 17 4312 NP_542453 17 4312 NP_055661 16 5631 NP_001091952 16 5631 NP_056136 16 5631 NP_056099 16 5631 NP_057253 16 5631 NP_004657 16 5631 NP_058642 16 5631 NP_065744 16 5631 NP_061859 16 5631 XP_006722773 16 5631 XP_005259893 16 5631 XP_005259892 16 5631 XP_005259891 16 5631 XP_005259890 16 5631 XP_006717955 16 5631 XP_006713954 16 5631 XP_006713953 16 5631 XP_006713952 16 5631 XP_005248031 16 5631 XP_006713951 16 5631 XP_006710564 16 5631 XP_005270743 16 5631 NP_981951 16 5631 NP_065861 16 7355 NP_001135993 16 7355 NP_001135991 16 7355 NP_071357 16 7355 NP_942144 16 7355 NP_001135992 16 7355 XP_006726770 16 7355 XP_006726769 16 7355 XP_006724601 16 7355 XP_006721680 16 7355 XP_006721679 16 7355 XP_005267973 16 7355 XP_006710082 16 7355 XP_006710081 16 7355 NP_000029 15 9605 NP_001120983 15 9605 NP_001120982 15 9605 NP_001073946 15 9605 NP_938080 15 9605 NP_055458 15 9605 NP_004659 15 9605 NP_000180 15 9605 NP_037411 15 9605 NP_001120864 15 9605 XP_005274286 15 9605 XP_005274285 15 9605 XP_005274284 15 9605 XP_005274283 15 9605 XP_005274282 15 9605 XP_005274281 15 9605 XP_005274280 15 9605 XP_005274279 15 9605 XP_006716232 15 9605 XP_006716231 15 9605 XP_006714321 15 9605 XP_006714320 15 9605 XP_006714319 15 9605 XP_005264337 15 9605>NP_002430 Length = 1137 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ATGDVVFDS 9 ATG+VVFDS Sbjct: 396 ATGEVVFDS 404>NP_631894 Length = 1226 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TGDVVF 7 TGDVVF Sbjct: 658 TGDVVF 663>NP_542453 Length = 1223 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TGDVVF 7 TGDVVF Sbjct: 655 TGDVVF 660>NP_055661 Length = 1159 Score = 16.2 bits (30), Expect = 5631 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 GDVVFD 8 GD++FD Sbjct: 52 GDIIFD 57>NP_001091952 Length = 650 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GDVVFDS 9 GDV FDS Sbjct: 601 GDVSFDS 607>NP_056136 Length = 634 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GDVVFDS 9 GDV FDS Sbjct: 585 GDVSFDS 591>NP_056099 Length = 3375 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 ATGDVVFD 8 +TG+++FD Sbjct: 112 STGEILFD 119>NP_057253 Length = 484 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 DVVFDS 9 DVVFDS Sbjct: 476 DVVFDS 481>NP_004657 Length = 513 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 DVVFDS 9 DVVFDS Sbjct: 163 DVVFDS 168>NP_058642 Length = 299 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TGDVVFD 8 TG++VFD Sbjct: 194 TGELVFD 200>NP_065744 Length = 2113 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ATGDVVFD 8 ATGD ++D Sbjct: 122 ATGDDIYD 129>NP_061859 Length = 1336 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 ATGDVVFD 8 A GD+ FD Sbjct: 1115 AAGDIFFD 1122>XP_006722773 Length = 512 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GDVVFDS 9 GDV FDS Sbjct: 463 GDVSFDS 469>XP_005259893 Length = 529 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GDVVFDS 9 GDV FDS Sbjct: 480 GDVSFDS 486>XP_005259892 Length = 564 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GDVVFDS 9 GDV FDS Sbjct: 515 GDVSFDS 521>XP_005259891 Length = 605 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GDVVFDS 9 GDV FDS Sbjct: 556 GDVSFDS 562>XP_005259890 Length = 621 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GDVVFDS 9 GDV FDS Sbjct: 572 GDVSFDS 578>XP_006717955 Length = 382 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 DVVFDS 9 DVVFDS Sbjct: 374 DVVFDS 379>XP_006713954 Length = 1043 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 ATGDVVFD 8 A GD+ FD Sbjct: 822 AAGDIFFD 829>XP_006713953 Length = 1043 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 ATGDVVFD 8 A GD+ FD Sbjct: 822 AAGDIFFD 829>XP_006713952 Length = 1165 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 ATGDVVFD 8 A GD+ FD Sbjct: 944 AAGDIFFD 951>XP_005248031 Length = 1260 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 ATGDVVFD 8 A GD+ FD Sbjct: 1039 AAGDIFFD 1046>XP_006713951 Length = 1309 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 ATGDVVFD 8 A GD+ FD Sbjct: 1088 AAGDIFFD 1095>XP_006710564 Length = 3432 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 ATGDVVFD 8 +TG+++FD Sbjct: 112 STGEILFD 119>XP_005270743 Length = 3453 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 ATGDVVFD 8 +TG+++FD Sbjct: 133 STGEILFD 140>NP_981951 Length = 279 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TGDVVFD 8 +GDVV+D Sbjct: 187 SGDVVYD 193>NP_065861 Length = 509 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GDVVFD 8 GDV+FD Sbjct: 299 GDVLFD 304>NP_001135993 Length = 611 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ATGDVVFDS 9 A+G VFDS Sbjct: 540 ASGSPVFDS 548>NP_001135991 Length = 611 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ATGDVVFDS 9 A+G VFDS Sbjct: 540 ASGSPVFDS 548>NP_071357 Length = 611 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ATGDVVFDS 9 A+G VFDS Sbjct: 540 ASGSPVFDS 548>NP_942144 Length = 611 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ATGDVVFDS 9 A+G VFDS Sbjct: 540 ASGSPVFDS 548>NP_001135992 Length = 611 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ATGDVVFDS 9 A+G VFDS Sbjct: 540 ASGSPVFDS 548>XP_006726770 Length = 758 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ATGDVVFDS 9 +TG VV+D+ Sbjct: 7 STGHVVYDA 15>XP_006726769 Length = 758 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ATGDVVFDS 9 +TG VV+D+ Sbjct: 7 STGHVVYDA 15>XP_006724601 Length = 1020 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 DVVFDS 9 DV+FDS Sbjct: 700 DVIFDS 705>XP_006721680 Length = 758 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ATGDVVFDS 9 +TG VV+D+ Sbjct: 7 STGHVVYDA 15>XP_006721679 Length = 758 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ATGDVVFDS 9 +TG VV+D+ Sbjct: 7 STGHVVYDA 15>XP_005267973 Length = 537 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GDVVFD 8 GDV+FD Sbjct: 327 GDVLFD 332>XP_006710082 Length = 758 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ATGDVVFDS 9 +TG VV+D+ Sbjct: 7 STGHVVYDA 15>XP_006710081 Length = 758 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ATGDVVFDS 9 +TG VV+D+ Sbjct: 7 STGHVVYDA 15>NP_000029 Length = 2843 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GDVVFDS 9 GD VFD+ Sbjct: 797 GDYVFDT 803>NP_001120983 Length = 2825 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GDVVFDS 9 GD VFD+ Sbjct: 779 GDYVFDT 785>NP_001120982 Length = 2843 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GDVVFDS 9 GD VFD+ Sbjct: 797 GDYVFDT 803>NP_001073946 Length = 2699 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ATGDVVFDS 9 A G++ FDS Sbjct: 2320 AYGEIYFDS 2328>NP_938080 Length = 603 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 ATGDVV 6 ATGDV+ Sbjct: 228 ATGDVI 233>NP_055458 Length = 1163 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 GDVVFD 8 GDV FD Sbjct: 445 GDVAFD 450>NP_004659 Length = 1857 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 ATGDVVFDS 9 +TG +++DS Sbjct: 1100 STGTIIWDS 1108>NP_000180 Length = 917 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TGDVVFD 8 TGD +FD Sbjct: 570 TGDELFD 576>NP_037411 Length = 1111 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TGDVVF 7 TGD+VF Sbjct: 643 TGDMVF 648>NP_001120864 Length = 1151 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TGDVVF 7 TGD+VF Sbjct: 652 TGDMVF 657>XP_005274286 Length = 1038 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TGDVVF 7 TGD+VF Sbjct: 538 TGDMVF 543>XP_005274285 Length = 1101 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TGDVVF 7 TGD+VF Sbjct: 601 TGDMVF 606>XP_005274284 Length = 1120 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TGDVVF 7 TGD+VF Sbjct: 652 TGDMVF 657>XP_005274283 Length = 1124 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TGDVVF 7 TGD+VF Sbjct: 652 TGDMVF 657>XP_005274282 Length = 1125 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TGDVVF 7 TGD+VF Sbjct: 652 TGDMVF 657>XP_005274281 Length = 1146 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TGDVVF 7 TGD+VF Sbjct: 652 TGDMVF 657>XP_005274280 Length = 1147 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TGDVVF 7 TGD+VF Sbjct: 652 TGDMVF 657>XP_005274279 Length = 1152 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TGDVVF 7 TGD+VF Sbjct: 652 TGDMVF 657>XP_006716232 Length = 2753 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 ATGDVVFDS 9 +TG +++DS Sbjct: 1100 STGTIIWDS 1108Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 ATGDVVFDS 9 +TG +++DS Sbjct: 1996 STGTIIWDS 2004>XP_006716231 Length = 2753 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 ATGDVVFDS 9 +TG +++DS Sbjct: 1100 STGTIIWDS 1108Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 ATGDVVFDS 9 +TG +++DS Sbjct: 1996 STGTIIWDS 2004>XP_006714321 Length = 2713 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ATGDVVFDS 9 A G++ FDS Sbjct: 2334 AYGEIYFDS 2342>XP_006714320 Length = 2720 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ATGDVVFDS 9 A G++ FDS Sbjct: 2341 AYGEIYFDS 2349>XP_006714319 Length = 2721 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ATGDVVFDS 9 A G++ FDS Sbjct: 2342 AYGEIYFDS 2350>XP_005264337 Length = 938 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TGDVVFD 8 TGD +FD Sbjct: 570 TGDELFD 576Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.316 0.134 0.374 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 599,996 Number of extensions: 1087 Number of successful extensions: 66 Number of sequences better than 10000.0: 64 Number of HSP's gapped: 66 Number of HSP's successfully gapped: 66 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |