Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_064450 17 2528 XP_005273257 17 2528 NP_073740 17 3301 NP_001180268 17 3301 NP_055874 17 3301 NP_065796 17 3301 XP_006720784 17 3301 XP_006720783 17 3301 XP_006720782 17 3301 XP_006720781 17 3301 XP_005254772 17 3301 XP_005254771 17 3301 XP_006720780 17 3301 XP_005254769 17 3301 XP_005254770 17 3301 XP_005254765 17 3301 XP_005254767 17 3301 XP_006720779 17 3301 XP_005254768 17 3301 XP_005254764 17 3301 XP_005249302 17 3301 NP_000529 16 7355 NP_001035203 15 9605 NP_074035 15 9605 NP_001035202 15 9605 NP_002465 15 9605 NP_001028198 15 9605 NP_115486 15 9605 NP_001264 15 9605 XP_005259736 15 9605 XP_005259735 15 9605 XP_005259734 15 9605 XP_005259733 15 9605 XP_005259732 15 9605 XP_006719025 15 9605 XP_005253725 15 9605 XP_006719024 15 9605 XP_006719023 15 9605 XP_006719022 15 9605 XP_006719021 15 9605>NP_064450 Length = 1722 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ASVAAAAKK 9 ASVAA AKK Sbjct: 460 ASVAAPAKK 468>XP_005273257 Length = 1726 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ASVAAAAKK 9 ASVAA AKK Sbjct: 460 ASVAAPAKK 468>NP_073740 Length = 602 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 ASVAAAAKK 9 A++AAAAKK Sbjct: 2 AALAAAAKK 10>NP_001180268 Length = 552 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 ASVAAAAKK 9 A++AAAAKK Sbjct: 2 AALAAAAKK 10>NP_055874 Length = 2542 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ASVAAAAKK 9 AS+ AAAKK Sbjct: 2315 ASIEAAAKK 2323>NP_065796 Length = 985 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 ASVAAAAKK 9 ASVAAAA++ Sbjct: 3 ASVAAAARR 11>XP_006720784 Length = 2502 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ASVAAAAKK 9 AS+ AAAKK Sbjct: 2275 ASIEAAAKK 2283>XP_006720783 Length = 2512 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ASVAAAAKK 9 AS+ AAAKK Sbjct: 2270 ASIEAAAKK 2278>XP_006720782 Length = 2517 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ASVAAAAKK 9 AS+ AAAKK Sbjct: 2275 ASIEAAAKK 2283>XP_006720781 Length = 2542 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ASVAAAAKK 9 AS+ AAAKK Sbjct: 2315 ASIEAAAKK 2323>XP_005254772 Length = 2557 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ASVAAAAKK 9 AS+ AAAKK Sbjct: 2315 ASIEAAAKK 2323>XP_005254771 Length = 2557 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ASVAAAAKK 9 AS+ AAAKK Sbjct: 2315 ASIEAAAKK 2323>XP_006720780 Length = 2557 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ASVAAAAKK 9 AS+ AAAKK Sbjct: 2315 ASIEAAAKK 2323>XP_005254769 Length = 2557 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ASVAAAAKK 9 AS+ AAAKK Sbjct: 2315 ASIEAAAKK 2323>XP_005254770 Length = 2557 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ASVAAAAKK 9 AS+ AAAKK Sbjct: 2315 ASIEAAAKK 2323>XP_005254765 Length = 2557 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ASVAAAAKK 9 AS+ AAAKK Sbjct: 2315 ASIEAAAKK 2323>XP_005254767 Length = 2557 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ASVAAAAKK 9 AS+ AAAKK Sbjct: 2315 ASIEAAAKK 2323>XP_006720779 Length = 2557 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ASVAAAAKK 9 AS+ AAAKK Sbjct: 2315 ASIEAAAKK 2323>XP_005254768 Length = 2557 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ASVAAAAKK 9 AS+ AAAKK Sbjct: 2315 ASIEAAAKK 2323>XP_005254764 Length = 2557 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ASVAAAAKK 9 AS+ AAAKK Sbjct: 2315 ASIEAAAKK 2323>XP_005249302 Length = 888 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 ASVAAAAKK 9 ASVAAAA++ Sbjct: 3 ASVAAAARR 11>NP_000529 Length = 272 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ASVAAAAKK 9 ASVAAAA + Sbjct: 35 ASVAAAASQ 43>NP_001035203 Length = 1979 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SVAAAAKK 9 ++AAAAKK Sbjct: 1620 ALAAAAKK 1627>NP_074035 Length = 1938 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SVAAAAKK 9 ++AAAAKK Sbjct: 1613 ALAAAAKK 1620>NP_001035202 Length = 1945 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SVAAAAKK 9 ++AAAAKK Sbjct: 1620 ALAAAAKK 1627>NP_002465 Length = 1972 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SVAAAAKK 9 ++AAAAKK Sbjct: 1613 ALAAAAKK 1620>NP_001028198 Length = 620 Score = 15.4 bits (28), Expect = 9605 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 ASVAAAA 7 ASVAAAA Sbjct: 528 ASVAAAA 534>NP_115486 Length = 542 Score = 15.4 bits (28), Expect = 9605 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 ASVAAAA 7 ASVAAAA Sbjct: 30 ASVAAAA 36>NP_001264 Length = 1912 Score = 15.4 bits (28), Expect = 9605 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 ASVAAAA 7 ASVAAAA Sbjct: 224 ASVAAAA 230>XP_005259736 Length = 440 Score = 15.4 bits (28), Expect = 9605 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 ASVAAAA 7 ASVAAAA Sbjct: 348 ASVAAAA 354>XP_005259735 Length = 626 Score = 15.4 bits (28), Expect = 9605 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 ASVAAAA 7 ASVAAAA Sbjct: 534 ASVAAAA 540>XP_005259734 Length = 644 Score = 15.4 bits (28), Expect = 9605 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 ASVAAAA 7 ASVAAAA Sbjct: 552 ASVAAAA 558>XP_005259733 Length = 655 Score = 15.4 bits (28), Expect = 9605 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 ASVAAAA 7 ASVAAAA Sbjct: 563 ASVAAAA 569>XP_005259732 Length = 661 Score = 15.4 bits (28), Expect = 9605 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 ASVAAAA 7 ASVAAAA Sbjct: 569 ASVAAAA 575>XP_006719025 Length = 1902 Score = 15.4 bits (28), Expect = 9605 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 ASVAAAA 7 ASVAAAA Sbjct: 224 ASVAAAA 230>XP_005253725 Length = 1905 Score = 15.4 bits (28), Expect = 9605 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 ASVAAAA 7 ASVAAAA Sbjct: 217 ASVAAAA 223>XP_006719024 Length = 1908 Score = 15.4 bits (28), Expect = 9605 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 ASVAAAA 7 ASVAAAA Sbjct: 217 ASVAAAA 223>XP_006719023 Length = 1914 Score = 15.4 bits (28), Expect = 9605 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 ASVAAAA 7 ASVAAAA Sbjct: 224 ASVAAAA 230>XP_006719022 Length = 1915 Score = 15.4 bits (28), Expect = 9605 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 ASVAAAA 7 ASVAAAA Sbjct: 224 ASVAAAA 230>XP_006719021 Length = 1940 Score = 15.4 bits (28), Expect = 9605 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 ASVAAAA 7 ASVAAAA Sbjct: 224 ASVAAAA 230Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.293 0.0930 0.194 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 230,258 Number of extensions: 197 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |