Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000236 17 4312 NP_001120972 17 4312 NP_006284 17 4312 XP_006716052 17 4312 XP_006716051 17 4312 NP_443157 16 5631 XP_005258543 16 5631 XP_006726249 16 5631 XP_005258542 16 5631 XP_005258541 16 5631 XP_005258540 16 5631 XP_006726248 16 5631 XP_005258539 16 5631 XP_005258538 16 5631 XP_005277301 16 5631 XP_006726369 16 5631 XP_005277300 16 5631 XP_005277299 16 5631 XP_005277298 16 5631 XP_006726368 16 5631 XP_005277297 16 5631 XP_005277296 16 5631 XP_006726331 16 5631 XP_005277122 16 5631 XP_005277120 16 5631 XP_006726330 16 5631 XP_005277119 16 5631 XP_005277118 16 5631 XP_006723060 16 5631 XP_005278309 16 5631 XP_005278307 16 5631 XP_006723059 16 5631 XP_005278306 16 5631 XP_005278305 16 5631 XP_003960165 16 7355 XP_006711162 16 7355 XP_003960950 16 7355>NP_000236 Length = 1390 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 STRANLSG 9 S++ANLSG Sbjct: 102 SSKANLSG 109>NP_001120972 Length = 1408 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 STRANLSG 9 S++ANLSG Sbjct: 102 SSKANLSG 109>NP_006284 Length = 890 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TRANLSG 9 TRANL+G Sbjct: 377 TRANLTG 383>XP_006716052 Length = 1409 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 STRANLSG 9 S++ANLSG Sbjct: 121 SSKANLSG 128>XP_006716051 Length = 1427 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 STRANLSG 9 S++ANLSG Sbjct: 121 SSKANLSG 128>NP_443157 Length = 800 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ASTRANLSG 9 +S R NLSG Sbjct: 276 SSARGNLSG 284>XP_005258543 Length = 800 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ASTRANLSG 9 +S R NLSG Sbjct: 276 SSARGNLSG 284>XP_006726249 Length = 819 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ASTRANLSG 9 +S R NLSG Sbjct: 221 SSARGNLSG 229>XP_005258542 Length = 837 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ASTRANLSG 9 +S R NLSG Sbjct: 239 SSARGNLSG 247>XP_005258541 Length = 837 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ASTRANLSG 9 +S R NLSG Sbjct: 239 SSARGNLSG 247>XP_005258540 Length = 856 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ASTRANLSG 9 +S R NLSG Sbjct: 258 SSARGNLSG 266>XP_006726248 Length = 856 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ASTRANLSG 9 +S R NLSG Sbjct: 258 SSARGNLSG 266>XP_005258539 Length = 874 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ASTRANLSG 9 +S R NLSG Sbjct: 276 SSARGNLSG 284>XP_005258538 Length = 874 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ASTRANLSG 9 +S R NLSG Sbjct: 276 SSARGNLSG 284>XP_005277301 Length = 800 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ASTRANLSG 9 +S R NLSG Sbjct: 276 SSARGNLSG 284>XP_006726369 Length = 819 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ASTRANLSG 9 +S R NLSG Sbjct: 221 SSARGNLSG 229>XP_005277300 Length = 837 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ASTRANLSG 9 +S R NLSG Sbjct: 239 SSARGNLSG 247>XP_005277299 Length = 837 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ASTRANLSG 9 +S R NLSG Sbjct: 239 SSARGNLSG 247>XP_005277298 Length = 856 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ASTRANLSG 9 +S R NLSG Sbjct: 258 SSARGNLSG 266>XP_006726368 Length = 856 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ASTRANLSG 9 +S R NLSG Sbjct: 258 SSARGNLSG 266>XP_005277297 Length = 874 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ASTRANLSG 9 +S R NLSG Sbjct: 276 SSARGNLSG 284>XP_005277296 Length = 874 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ASTRANLSG 9 +S R NLSG Sbjct: 276 SSARGNLSG 284>XP_006726331 Length = 819 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ASTRANLSG 9 +S R NLSG Sbjct: 221 SSARGNLSG 229>XP_005277122 Length = 837 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ASTRANLSG 9 +S R NLSG Sbjct: 239 SSARGNLSG 247>XP_005277120 Length = 856 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ASTRANLSG 9 +S R NLSG Sbjct: 258 SSARGNLSG 266>XP_006726330 Length = 856 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ASTRANLSG 9 +S R NLSG Sbjct: 258 SSARGNLSG 266>XP_005277119 Length = 874 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ASTRANLSG 9 +S R NLSG Sbjct: 276 SSARGNLSG 284>XP_005277118 Length = 874 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ASTRANLSG 9 +S R NLSG Sbjct: 276 SSARGNLSG 284>XP_006723060 Length = 819 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ASTRANLSG 9 +S R NLSG Sbjct: 221 SSARGNLSG 229>XP_005278309 Length = 837 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ASTRANLSG 9 +S R NLSG Sbjct: 239 SSARGNLSG 247>XP_005278307 Length = 856 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ASTRANLSG 9 +S R NLSG Sbjct: 258 SSARGNLSG 266>XP_006723059 Length = 856 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ASTRANLSG 9 +S R NLSG Sbjct: 258 SSARGNLSG 266>XP_005278306 Length = 874 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ASTRANLSG 9 +S R NLSG Sbjct: 276 SSARGNLSG 284>XP_005278305 Length = 874 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ASTRANLSG 9 +S R NLSG Sbjct: 276 SSARGNLSG 284>XP_003960165 Length = 254 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ASTRANLSG 9 A+ R+NLSG Sbjct: 233 ATHRSNLSG 241>XP_006711162 Length = 219 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ASTRANLSG 9 A+ R+NLSG Sbjct: 198 ATHRSNLSG 206>XP_003960950 Length = 219 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ASTRANLSG 9 A+ R+NLSG Sbjct: 198 ATHRSNLSG 206Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.298 0.108 0.263 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 306,125 Number of extensions: 328 Number of successful extensions: 37 Number of sequences better than 10000.0: 37 Number of HSP's gapped: 37 Number of HSP's successfully gapped: 37 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |