Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_878314 18 1935 NP_005453 17 4312 XP_003846820 17 4312 NP_001258614 16 5631 NP_127493 16 5631 NP_001267729 16 5631 NP_127494 16 5631 NP_001157108 16 5631 NP_001509 16 5631 NP_127492 16 5631 NP_775808 16 5631 XP_005272291 16 5631 XP_005277669 16 5631 XP_005277638 16 5631 XP_005277637 16 5631 XP_005277636 16 5631 XP_006716009 16 5631 XP_005250353 16 5631 XP_006716008 16 5631 XP_006716007 16 5631 XP_006716006 16 5631 XP_006716005 16 5631 XP_006716004 16 5631 XP_006716003 16 5631 XP_006716002 16 5631 XP_005250348 16 5631 NP_001003795 16 5631 NP_059125 16 7355 NP_116254 16 7355 XP_005257801 16 7355 NP_085143 15 9605 NP_004774 15 9605 NP_057235 15 9605 NP_001238972 15 9605 XP_005253545 15 9605 XP_006719218 15 9605>NP_878314 Length = 361 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 ASRSIMSPA 9 A+RS++SPA Sbjct: 63 AARSVLSPA 71>NP_005453 Length = 1142 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ASRSIMSPA 9 AS S+MSP+ Sbjct: 1130 ASSSVMSPS 1138>XP_003846820 Length = 1177 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ASRSIMSPA 9 AS S+MSP+ Sbjct: 1165 ASSSVMSPS 1173>NP_001258614 Length = 367 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ASRSIMSP 8 +SRS++SP Sbjct: 2 SSRSVLSP 9>NP_127493 Length = 978 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ASRSIMSP 8 A RSI+SP Sbjct: 204 ADRSILSP 211>NP_001267729 Length = 274 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ASRSIMSP 8 A RSI+SP Sbjct: 204 ADRSILSP 211>NP_127494 Length = 977 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ASRSIMSP 8 A RSI+SP Sbjct: 204 ADRSILSP 211>NP_001157108 Length = 976 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ASRSIMSP 8 A RSI+SP Sbjct: 204 ADRSILSP 211>NP_001509 Length = 957 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ASRSIMSP 8 A RSI+SP Sbjct: 204 ADRSILSP 211>NP_127492 Length = 998 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ASRSIMSP 8 A RSI+SP Sbjct: 204 ADRSILSP 211>NP_775808 Length = 949 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ASRSIMSPA 9 A RSI+SP+ Sbjct: 199 AERSIVSPS 207>XP_005272291 Length = 537 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ASRSIMSPA 9 ASR++ SPA Sbjct: 516 ASRTVESPA 524>XP_005277669 Length = 949 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ASRSIMSPA 9 A RSI+SP+ Sbjct: 199 AERSIVSPS 207>XP_005277638 Length = 755 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ASRSIMSPA 9 A RSI+SP+ Sbjct: 5 AERSIVSPS 13>XP_005277637 Length = 878 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ASRSIMSPA 9 A RSI+SP+ Sbjct: 128 AERSIVSPS 136>XP_005277636 Length = 949 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ASRSIMSPA 9 A RSI+SP+ Sbjct: 199 AERSIVSPS 207>XP_006716009 Length = 596 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ASRSIMSP 8 A RSI+SP Sbjct: 216 ADRSILSP 223>XP_005250353 Length = 969 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ASRSIMSP 8 A RSI+SP Sbjct: 216 ADRSILSP 223>XP_006716008 Length = 988 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ASRSIMSP 8 A RSI+SP Sbjct: 216 ADRSILSP 223>XP_006716007 Length = 989 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ASRSIMSP 8 A RSI+SP Sbjct: 216 ADRSILSP 223>XP_006716006 Length = 990 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ASRSIMSP 8 A RSI+SP Sbjct: 216 ADRSILSP 223>XP_006716005 Length = 998 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ASRSIMSP 8 A RSI+SP Sbjct: 204 ADRSILSP 211>XP_006716004 Length = 1003 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ASRSIMSP 8 A RSI+SP Sbjct: 209 ADRSILSP 216>XP_006716003 Length = 1009 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ASRSIMSP 8 A RSI+SP Sbjct: 216 ADRSILSP 223>XP_006716002 Length = 1010 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ASRSIMSP 8 A RSI+SP Sbjct: 216 ADRSILSP 223>XP_005250348 Length = 1010 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ASRSIMSP 8 A RSI+SP Sbjct: 216 ADRSILSP 223>NP_001003795 Length = 949 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ASRSIMSPA 9 A RSI+SP+ Sbjct: 199 AERSIVSPS 207>NP_059125 Length = 547 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SRSIMSPA 9 SRS++SP+ Sbjct: 227 SRSLLSPS 234>NP_116254 Length = 715 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ASRSIMSPA 9 +SRS+ SPA Sbjct: 303 SSRSLESPA 311>XP_005257801 Length = 714 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ASRSIMSPA 9 +SRS+ SPA Sbjct: 302 SSRSLESPA 310>NP_085143 Length = 665 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ASRSIMSP 8 A RS++SP Sbjct: 495 AQRSLLSP 502>NP_004774 Length = 1049 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRSIMSPA 9 S SIM+PA Sbjct: 172 SASIMAPA 179>NP_057235 Length = 1235 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRSIMSPA 9 S SIM+PA Sbjct: 172 SASIMAPA 179>NP_001238972 Length = 1122 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRSIMSPA 9 S SIM+PA Sbjct: 172 SASIMAPA 179>XP_005253545 Length = 517 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ASRSIMSP 8 A RS++SP Sbjct: 347 AQRSLLSP 354>XP_006719218 Length = 665 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ASRSIMSP 8 A RS++SP Sbjct: 495 AQRSLLSP 502Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.308 0.108 0.266 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 447,394 Number of extensions: 518 Number of successful extensions: 36 Number of sequences better than 10000.0: 36 Number of HSP's gapped: 36 Number of HSP's successfully gapped: 36 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |