Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001257436 20 509 NP_001257437 20 509 NP_006281 20 509 XP_006715618 20 509 XP_005267176 20 509 NP_000937 17 4312 NP_005501 17 4312 XP_006726142 17 4312 XP_006726141 17 4312 XP_006726049 17 4312 XP_006726048 17 4312 XP_006725962 17 4312 XP_006725961 17 4312 XP_006725752 17 4312 XP_006725751 17 4312 XP_006725538 17 4312 XP_006725537 17 4312 XP_006715069 17 4312 XP_006715068 17 4312 NP_219494 16 5631 NP_004952 16 5631 NP_004987 16 7355 XP_006720948 16 7355 XP_006720947 16 7355 XP_005255386 16 7355 XP_005255385 16 7355 XP_005255384 16 7355 XP_006712581 16 7355 XP_005246132 16 7355 NP_001073973 16 7355 NP_733936 15 9605 NP_001071 15 9605 NP_997291 15 9605 XP_005276293 15 9605 XP_005264833 15 9605 XP_005270777 15 9605 XP_006710615 15 9605 XP_005270776 15 9605 XP_005276006 15 9605 NP_694991 15 9605>NP_001257436 Length = 790 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ASRFQNTI 8 ASRFQNTI Sbjct: 648 ASRFQNTI 655>NP_001257437 Length = 790 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ASRFQNTI 8 ASRFQNTI Sbjct: 648 ASRFQNTI 655>NP_006281 Length = 790 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ASRFQNTI 8 ASRFQNTI Sbjct: 648 ASRFQNTI 655>XP_006715618 Length = 577 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ASRFQNTI 8 ASRFQNTI Sbjct: 435 ASRFQNTI 442>XP_005267176 Length = 790 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ASRFQNTI 8 ASRFQNTI Sbjct: 648 ASRFQNTI 655>NP_000937 Length = 420 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ASRFQNTI 8 ASR+QN I Sbjct: 276 ASRYQNNI 283>NP_005501 Length = 396 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ASRFQNTI 8 ASRFQ T+ Sbjct: 153 ASRFQGTL 160>XP_006726142 Length = 338 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ASRFQNTI 8 ASRFQ T+ Sbjct: 153 ASRFQGTL 160>XP_006726141 Length = 396 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ASRFQNTI 8 ASRFQ T+ Sbjct: 153 ASRFQGTL 160>XP_006726049 Length = 338 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ASRFQNTI 8 ASRFQ T+ Sbjct: 153 ASRFQGTL 160>XP_006726048 Length = 396 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ASRFQNTI 8 ASRFQ T+ Sbjct: 153 ASRFQGTL 160>XP_006725962 Length = 338 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ASRFQNTI 8 ASRFQ T+ Sbjct: 153 ASRFQGTL 160>XP_006725961 Length = 396 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ASRFQNTI 8 ASRFQ T+ Sbjct: 153 ASRFQGTL 160>XP_006725752 Length = 338 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ASRFQNTI 8 ASRFQ T+ Sbjct: 153 ASRFQGTL 160>XP_006725751 Length = 396 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ASRFQNTI 8 ASRFQ T+ Sbjct: 153 ASRFQGTL 160>XP_006725538 Length = 338 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ASRFQNTI 8 ASRFQ T+ Sbjct: 153 ASRFQGTL 160>XP_006725537 Length = 396 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ASRFQNTI 8 ASRFQ T+ Sbjct: 153 ASRFQGTL 160>XP_006715069 Length = 338 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ASRFQNTI 8 ASRFQ T+ Sbjct: 153 ASRFQGTL 160>XP_006715068 Length = 396 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ASRFQNTI 8 ASRFQ T+ Sbjct: 153 ASRFQGTL 160>NP_219494 Length = 399 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RFQNTIL 9 RFQNT++ Sbjct: 316 RFQNTLV 322>NP_004952 Length = 506 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ASRFQNTIL 9 ASR NTIL Sbjct: 71 ASRILNTIL 79>NP_004987 Length = 1531 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FQNTIL 9 FQNT+L Sbjct: 33 FQNTVL 38>XP_006720948 Length = 1401 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FQNTIL 9 FQNT+L Sbjct: 33 FQNTVL 38>XP_006720947 Length = 1466 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FQNTIL 9 FQNT+L Sbjct: 33 FQNTVL 38>XP_005255386 Length = 1472 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FQNTIL 9 FQNT+L Sbjct: 33 FQNTVL 38>XP_005255385 Length = 1485 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FQNTIL 9 FQNT+L Sbjct: 33 FQNTVL 38>XP_005255384 Length = 1489 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FQNTIL 9 FQNT+L Sbjct: 33 FQNTVL 38>XP_006712581 Length = 1047 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 SRFQNTIL 9 S+FQN+++ Sbjct: 263 SKFQNSVM 270>XP_005246132 Length = 1047 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 SRFQNTIL 9 S+FQN+++ Sbjct: 263 SKFQNSVM 270>NP_001073973 Length = 1052 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 SRFQNTIL 9 S+FQN+++ Sbjct: 263 SKFQNSVM 270>NP_733936 Length = 548 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ASRFQNT 7 AS+F+NT Sbjct: 343 ASKFRNT 349>NP_001071 Length = 535 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ASRFQNT 7 AS+F+NT Sbjct: 330 ASKFRNT 336>NP_997291 Length = 134 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 SRFQNTIL 9 SR+Q+T++ Sbjct: 118 SRYQSTVI 125>XP_005276293 Length = 695 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SRFQNT 7 S+FQNT Sbjct: 342 SKFQNT 347>XP_005264833 Length = 441 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SRFQNT 7 S+FQNT Sbjct: 342 SKFQNT 347>XP_005270777 Length = 453 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FQNTIL 9 FQNTI+ Sbjct: 246 FQNTII 251>XP_006710615 Length = 538 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FQNTIL 9 FQNTI+ Sbjct: 218 FQNTII 223>XP_005270776 Length = 538 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FQNTIL 9 FQNTI+ Sbjct: 218 FQNTII 223>XP_005276006 Length = 695 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SRFQNT 7 S+FQNT Sbjct: 342 SKFQNT 347>NP_694991 Length = 566 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FQNTIL 9 FQNTI+ Sbjct: 246 FQNTII 251Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.329 0.131 0.340 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 409,286 Number of extensions: 382 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |