Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001243398 18 1135 NP_036462 18 1135 NP_001243397 18 1135 XP_005269721 18 1135 NP_078966 17 4312 NP_006355 17 4312 NP_001073922 17 4312 XP_006723004 17 4312 XP_005267319 17 4312 XP_006716351 17 4312 NP_543148 17 4312 NP_065955 16 5631 NP_001154826 16 5631 NP_001258436 16 5631 XP_006723364 16 5631 XP_005259166 16 5631 XP_005259165 16 5631 XP_005259164 16 5631 XP_005248810 16 5631 XP_006715597 16 5631 XP_005248809 16 5631 NP_003867 16 5631 NP_001695 16 5631 NP_001005513 16 7355 NP_004842 16 7355 NP_057635 16 7355 NP_004177 16 7355 XP_006713352 16 7355 XP_005265439 16 7355 XP_005265438 16 7355 NP_000858 15 9605 NP_001273052 15 9605 NP_001273054 15 9605 NP_005826 15 9605 NP_789792 15 9605 NP_777576 15 9605 NP_525023 15 9605 NP_001264671 15 9605 NP_063938 15 9605 XP_006721855 15 9605 XP_006721854 15 9605 XP_006721853 15 9605 XP_006718281 15 9605 XP_006715015 15 9605 XP_006715014 15 9605 XP_006715013 15 9605 XP_006715012 15 9605 XP_005248841 15 9605 XP_005246577 15 9605 XP_006712545 15 9605 XP_005264490 15 9605>NP_001243398 Length = 1781 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ASLFTPLSN 9 ASL TPLSN Sbjct: 1555 ASLSTPLSN 1563>NP_036462 Length = 2073 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ASLFTPLSN 9 ASL TPLSN Sbjct: 1847 ASLSTPLSN 1855>NP_001243397 Length = 1890 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ASLFTPLSN 9 ASL TPLSN Sbjct: 1664 ASLSTPLSN 1672>XP_005269721 Length = 2073 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ASLFTPLSN 9 ASL TPLSN Sbjct: 1847 ASLSTPLSN 1855>NP_078966 Length = 14507 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SLFTPLS 8 SLFTPL+ Sbjct: 12000 SLFTPLT 12006>NP_006355 Length = 765 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ASLFTPL 7 A+LFTPL Sbjct: 39 AALFTPL 45>NP_001073922 Length = 2190 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SLFTPLS 8 SLFTPL+ Sbjct: 2037 SLFTPLT 2043>XP_006723004 Length = 6443 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SLFTPLS 8 SLFTPL+ Sbjct: 3914 SLFTPLT 3920>XP_005267319 Length = 789 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ASLFTPL 7 A+LFTPL Sbjct: 39 AALFTPL 45>XP_006716351 Length = 865 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ASLFTPLSN 9 +SLF PLS+ Sbjct: 384 SSLFNPLSD 392>NP_543148 Length = 953 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ASLFTPLSN 9 +SLF PLS+ Sbjct: 472 SSLFNPLSD 480>NP_065955 Length = 779 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LFTPLS 8 LFTPLS Sbjct: 232 LFTPLS 237>NP_001154826 Length = 583 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LFTPLS 8 LFTPLS Sbjct: 232 LFTPLS 237>NP_001258436 Length = 707 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LFTPLS 8 LFTPLS Sbjct: 163 LFTPLS 168>XP_006723364 Length = 637 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LFTPLS 8 LFTPLS Sbjct: 232 LFTPLS 237>XP_005259166 Length = 595 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LFTPLS 8 LFTPLS Sbjct: 232 LFTPLS 237>XP_005259165 Length = 662 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LFTPLS 8 LFTPLS Sbjct: 232 LFTPLS 237>XP_005259164 Length = 754 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LFTPLS 8 LFTPLS Sbjct: 232 LFTPLS 237>XP_005248810 Length = 1078 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SLFTPLSN 9 S+FTP+S+ Sbjct: 744 SIFTPVSS 751>XP_006715597 Length = 1489 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SLFTPLSN 9 S+FTP+S+ Sbjct: 744 SIFTPVSS 751>XP_005248809 Length = 1522 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SLFTPLSN 9 S+FTP+S+ Sbjct: 744 SIFTPVSS 751>NP_003867 Length = 192 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ASLFTPLS 8 A LFTPL+ Sbjct: 91 ACLFTPLA 98>NP_001695 Length = 1522 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SLFTPLSN 9 S+FTP+S+ Sbjct: 744 SIFTPVSS 751>NP_001005513 Length = 306 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SLFTPLSN 9 +LFTP+ N Sbjct: 271 TLFTPMLN 278>NP_004842 Length = 420 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LFTPLSN 9 +F PLSN Sbjct: 66 IFVPLSN 72>NP_057635 Length = 570 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SLFTPLSN 9 + FTPL N Sbjct: 391 TFFTPLGN 398>NP_004177 Length = 785 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ASLFTPLS 8 A+LF PLS Sbjct: 704 AALFPPLS 711>XP_006713352 Length = 588 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ASLFTPLS 8 A+LF PLS Sbjct: 507 AALFPPLS 514>XP_005265439 Length = 754 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ASLFTPLS 8 A+LF PLS Sbjct: 673 AALFPPLS 680>XP_005265438 Length = 785 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ASLFTPLS 8 A+LF PLS Sbjct: 704 AALFPPLS 711>NP_000858 Length = 481 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ASLFTPLS 8 A+ FTPL+ Sbjct: 224 AAFFTPLA 231>NP_001273052 Length = 478 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SLFTPLS 8 +LFTPL+ Sbjct: 133 TLFTPLA 139>NP_001273054 Length = 398 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SLFTPLS 8 +LFTPL+ Sbjct: 133 TLFTPLA 139>NP_005826 Length = 436 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SLFTPLS 8 +LFTPL+ Sbjct: 133 TLFTPLA 139>NP_789792 Length = 1093 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ASLFTPL 7 +SLFTP+ Sbjct: 405 SSLFTPV 411>NP_777576 Length = 1749 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SLFTPL 7 S+FTPL Sbjct: 69 SIFTPL 74>NP_525023 Length = 1617 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 LFTPLSN 9 ++TP+SN Sbjct: 78 VYTPISN 84>NP_001264671 Length = 437 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 LFTPLS 8 LFTP+S Sbjct: 289 LFTPIS 294>NP_063938 Length = 512 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 LFTPLS 8 LFTP+S Sbjct: 364 LFTPIS 369>XP_006721855 Length = 1551 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 LFTPLSN 9 ++TP+SN Sbjct: 78 VYTPISN 84>XP_006721854 Length = 1577 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 LFTPLSN 9 ++TP+SN Sbjct: 78 VYTPISN 84>XP_006721853 Length = 1617 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 LFTPLSN 9 ++TP+SN Sbjct: 78 VYTPISN 84>XP_006718281 Length = 983 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ASLFTPL 7 +SLFTP+ Sbjct: 295 SSLFTPV 301>XP_006715015 Length = 356 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SLFTPLS 8 +LFTPL+ Sbjct: 133 TLFTPLA 139>XP_006715014 Length = 398 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SLFTPLS 8 +LFTPL+ Sbjct: 133 TLFTPLA 139>XP_006715013 Length = 455 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SLFTPLS 8 +LFTPL+ Sbjct: 110 TLFTPLA 116>XP_006715012 Length = 478 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SLFTPLS 8 +LFTPL+ Sbjct: 133 TLFTPLA 139>XP_005248841 Length = 478 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SLFTPLS 8 +LFTPL+ Sbjct: 133 TLFTPLA 139>XP_005246577 Length = 362 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ASLFTPLS 8 A+ FTPL+ Sbjct: 105 AAFFTPLA 112>XP_006712545 Length = 456 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ASLFTPLS 8 A+ FTPL+ Sbjct: 199 AAFFTPLA 206>XP_005264490 Length = 454 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 LFTPLS 8 LFTP+S Sbjct: 306 LFTPIS 311Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.314 0.124 0.341 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 616,460 Number of extensions: 859 Number of successful extensions: 51 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |