Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_665698 17 4312 NP_001098983 17 4312 XP_006713075 17 4312 XP_005264984 17 4312 XP_005264982 17 4312 XP_005264980 17 4312 XP_006713074 17 4312 XP_005264979 17 4312 XP_005264978 17 4312 NP_000366 16 5631 XP_005270198 16 5631 XP_005270197 16 5631 XP_005270196 16 5631 XP_005270195 16 5631 XP_006718023 16 5631 XP_005270194 16 5631 NP_036566 16 7355 NP_001070 16 7355 NP_997402 16 7355 NP_001072982 16 7355 NP_079524 16 7355 NP_775840 16 7355 NP_001275585 16 7355 XP_006725425 16 7355 XP_006725424 16 7355 XP_006725423 16 7355 XP_006725422 16 7355 XP_006725421 16 7355 XP_006725420 16 7355 XP_006725419 16 7355 XP_006722186 16 7355 XP_006722185 16 7355 XP_006722184 16 7355 XP_006722183 16 7355 XP_006722182 16 7355 XP_006722181 16 7355 XP_006722180 16 7355 XP_005255340 16 7355 XP_005255337 16 7355 XP_005255336 16 7355 XP_005255335 16 7355 XP_005255334 16 7355 XP_006715979 16 7355 XP_005250306 16 7355 XP_005248768 16 7355 XP_006715522 16 7355 XP_005248767 16 7355 XP_006712792 16 7355 XP_005264072 16 7355 NP_001155973 15 9605 NP_055903 15 9605 NP_110404 15 9605 XP_006723943 15 9605 XP_006723942 15 9605>NP_665698 Length = 1320 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ASLASKVG 8 ASLAS++G Sbjct: 762 ASLASRIG 769>NP_001098983 Length = 1272 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ASLASKVG 8 ASLAS++G Sbjct: 714 ASLASRIG 721>XP_006713075 Length = 1019 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ASLASKVG 8 ASLAS++G Sbjct: 755 ASLASRIG 762>XP_005264984 Length = 1140 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ASLASKVG 8 ASLAS++G Sbjct: 568 ASLASRIG 575>XP_005264982 Length = 1286 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ASLASKVG 8 ASLAS++G Sbjct: 714 ASLASRIG 721>XP_005264980 Length = 1313 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ASLASKVG 8 ASLAS++G Sbjct: 755 ASLASRIG 762>XP_006713074 Length = 1318 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ASLASKVG 8 ASLAS++G Sbjct: 755 ASLASRIG 762>XP_005264979 Length = 1322 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ASLASKVG 8 ASLAS++G Sbjct: 755 ASLASRIG 762>XP_005264978 Length = 1327 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ASLASKVG 8 ASLAS++G Sbjct: 755 ASLASRIG 762>NP_000366 Length = 265 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ASLASKVG 8 ASL SK+G Sbjct: 104 ASLVSKIG 111>XP_005270198 Length = 139 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ASLASKVG 8 ASL SK+G Sbjct: 104 ASLVSKIG 111>XP_005270197 Length = 223 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ASLASKVG 8 ASL SK+G Sbjct: 104 ASLVSKIG 111>XP_005270196 Length = 262 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ASLASKVG 8 ASL SK+G Sbjct: 104 ASLVSKIG 111>XP_005270195 Length = 265 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ASLASKVG 8 ASL SK+G Sbjct: 104 ASLVSKIG 111>XP_006718023 Length = 292 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ASLASKVG 8 ASL SK+G Sbjct: 104 ASLVSKIG 111>XP_005270194 Length = 292 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ASLASKVG 8 ASL SK+G Sbjct: 104 ASLVSKIG 111>NP_036566 Length = 495 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LASKVGG 9 +ASK+GG Sbjct: 129 VASKIGG 135>NP_001070 Length = 619 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 SLASKVGG 9 SLASKV G Sbjct: 599 SLASKVEG 606>NP_997402 Length = 312 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 SLASKVGG 9 SLASKV G Sbjct: 292 SLASKVEG 299>NP_001072982 Length = 1134 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ASLASKVGG 9 ASL +K GG Sbjct: 151 ASLTTKYGG 159>NP_079524 Length = 1183 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LASKVGG 9 LASK GG Sbjct: 380 LASKAGG 386>NP_775840 Length = 1347 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ASLASKVGG 9 ASL +K GG Sbjct: 228 ASLTTKYGG 236>NP_001275585 Length = 1104 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ASLASKVGG 9 ASL +K GG Sbjct: 151 ASLTTKYGG 159>XP_006725425 Length = 1035 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LASKVGG 9 LASK GG Sbjct: 234 LASKAGG 240>XP_006725424 Length = 1078 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LASKVGG 9 LASK GG Sbjct: 234 LASKAGG 240>XP_006725423 Length = 1078 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LASKVGG 9 LASK GG Sbjct: 234 LASKAGG 240>XP_006725422 Length = 1091 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LASKVGG 9 LASK GG Sbjct: 331 LASKAGG 337>XP_006725421 Length = 1132 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LASKVGG 9 LASK GG Sbjct: 331 LASKAGG 337>XP_006725420 Length = 1134 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LASKVGG 9 LASK GG Sbjct: 290 LASKAGG 296>XP_006725419 Length = 1175 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LASKVGG 9 LASK GG Sbjct: 331 LASKAGG 337>XP_006722186 Length = 1035 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LASKVGG 9 LASK GG Sbjct: 234 LASKAGG 240>XP_006722185 Length = 1078 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LASKVGG 9 LASK GG Sbjct: 234 LASKAGG 240>XP_006722184 Length = 1078 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LASKVGG 9 LASK GG Sbjct: 234 LASKAGG 240>XP_006722183 Length = 1091 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LASKVGG 9 LASK GG Sbjct: 331 LASKAGG 337>XP_006722182 Length = 1132 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LASKVGG 9 LASK GG Sbjct: 331 LASKAGG 337>XP_006722181 Length = 1134 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LASKVGG 9 LASK GG Sbjct: 290 LASKAGG 296>XP_006722180 Length = 1175 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LASKVGG 9 LASK GG Sbjct: 331 LASKAGG 337>XP_005255340 Length = 525 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ASLASKVGG 9 ASL +K GG Sbjct: 151 ASLTTKYGG 159>XP_005255337 Length = 1104 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ASLASKVGG 9 ASL +K GG Sbjct: 151 ASLTTKYGG 159>XP_005255336 Length = 1112 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ASLASKVGG 9 ASL +K GG Sbjct: 151 ASLTTKYGG 159>XP_005255335 Length = 1161 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ASLASKVGG 9 ASL +K GG Sbjct: 151 ASLTTKYGG 159>XP_005255334 Length = 1161 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ASLASKVGG 9 ASL +K GG Sbjct: 151 ASLTTKYGG 159>XP_006715979 Length = 1136 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ASLASKVGG 9 ASL +K GG Sbjct: 17 ASLTTKYGG 25>XP_005250306 Length = 1170 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ASLASKVGG 9 ASL +K GG Sbjct: 51 ASLTTKYGG 59>XP_005248768 Length = 429 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LASKVGG 9 +ASK+GG Sbjct: 63 VASKIGG 69>XP_006715522 Length = 442 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LASKVGG 9 +ASK+GG Sbjct: 129 VASKIGG 135>XP_005248767 Length = 478 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LASKVGG 9 +ASK+GG Sbjct: 112 VASKIGG 118>XP_006712792 Length = 312 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 SLASKVGG 9 SLASKV G Sbjct: 292 SLASKVEG 299>XP_005264072 Length = 613 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 SLASKVGG 9 SLASKV G Sbjct: 593 SLASKVEG 600>NP_001155973 Length = 1833 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 ASLASKVG 8 ASLASK G Sbjct: 789 ASLASKGG 796>NP_055903 Length = 1723 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 ASLASKVG 8 ASLASK G Sbjct: 789 ASLASKGG 796>NP_110404 Length = 541 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ASLASKVGG 9 A LAS VGG Sbjct: 58 ALLASLVGG 66>XP_006723943 Length = 473 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ASLASKVGG 9 A LAS VGG Sbjct: 58 ALLASLVGG 66>XP_006723942 Length = 538 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ASLASKVGG 9 A LAS VGG Sbjct: 58 ALLASLVGG 66Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.300 0.118 0.293 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 270,259 Number of extensions: 360 Number of successful extensions: 54 Number of sequences better than 10000.0: 54 Number of HSP's gapped: 54 Number of HSP's successfully gapped: 54 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |