Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001264198 17 3301 XP_005265796 17 3301 NP_001019782 17 3301 NP_004781 16 5631 NP_695008 16 5631 NP_695010 16 5631 NP_695009 16 5631 NP_149076 16 5631 NP_938023 16 7355 XP_005268502 16 7355 NP_149024 15 9605 NP_004949 15 9605 NP_542164 15 9605 NP_001275707 15 9605 NP_001275705 15 9605 NP_001275505 15 9605 NP_001096645 15 9605 NP_001093881 15 9605 NP_116019 15 9605 NP_004415 15 9605 NP_078857 15 9605 XP_006722446 15 9605 XP_006722445 15 9605 XP_006722444 15 9605 XP_006722443 15 9605 XP_006720921 15 9605 XP_006720920 15 9605 XP_005255213 15 9605 XP_005255212 15 9605 XP_005255192 15 9605 XP_006720913 15 9605 XP_005263495 15 9605>NP_001264198 Length = 2925 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LAKELTH 9 LAKE+TH Sbjct: 222 LAKEVTH 228>XP_005265796 Length = 880 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ASLAKELTH 9 ASL K LTH Sbjct: 586 ASLCKMLTH 594>NP_001019782 Length = 880 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ASLAKELTH 9 ASL K LTH Sbjct: 586 ASLCKMLTH 594>NP_004781 Length = 563 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 ASLAKELT 8 ASL KELT Sbjct: 311 ASLQKELT 318>NP_695008 Length = 550 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 ASLAKELT 8 ASL KELT Sbjct: 311 ASLQKELT 318>NP_695010 Length = 519 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 ASLAKELT 8 ASL KELT Sbjct: 311 ASLQKELT 318>NP_695009 Length = 506 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 ASLAKELT 8 ASL KELT Sbjct: 311 ASLQKELT 318>NP_149076 Length = 183 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SLAKELTH 9 SLA+EL H Sbjct: 15 SLAEELNH 22>NP_938023 Length = 379 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SLAKELTH 9 SLA+EL H Sbjct: 65 SLAEELRH 72>XP_005268502 Length = 283 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SLAKELTH 9 SLA+EL H Sbjct: 65 SLAEELRH 72>NP_149024 Length = 159 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ASLAKEL 7 ASLAKE+ Sbjct: 91 ASLAKEM 97>NP_004949 Length = 2549 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ASLAKELTH 9 A AKEL H Sbjct: 38 AKAAKELQH 46>NP_542164 Length = 950 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AKELTH 9 AKE+TH Sbjct: 117 AKEVTH 122>NP_001275707 Length = 607 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ASLAKELTH 9 ASLA +++H Sbjct: 125 ASLAADISH 133>NP_001275705 Length = 654 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ASLAKELTH 9 ASLA +++H Sbjct: 125 ASLAADISH 133>NP_001275505 Length = 936 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ASLAKELTH 9 ASL EL H Sbjct: 699 ASLRSELNH 707>NP_001096645 Length = 508 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ASLAKELTH 9 ASL EL H Sbjct: 293 ASLQSELAH 301>NP_001093881 Length = 971 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ASLAKELTH 9 ASL EL H Sbjct: 699 ASLRSELNH 707>NP_116019 Length = 212 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SLAKELTH 9 ++AKEL H Sbjct: 165 TVAKELAH 172>NP_004415 Length = 784 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ASLAKELTH 9 ASLA +++H Sbjct: 125 ASLAADISH 133>NP_078857 Length = 1140 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ASLAKELTH 9 ASL EL H Sbjct: 819 ASLRSELNH 827>XP_006722446 Length = 889 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AKELTH 9 AKE+TH Sbjct: 117 AKEVTH 122>XP_006722445 Length = 905 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AKELTH 9 AKE+TH Sbjct: 117 AKEVTH 122>XP_006722444 Length = 914 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AKELTH 9 AKE+TH Sbjct: 117 AKEVTH 122>XP_006722443 Length = 925 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AKELTH 9 AKE+TH Sbjct: 92 AKEVTH 97>XP_006720921 Length = 783 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ASLAKELTH 9 ASLA +++H Sbjct: 125 ASLAADISH 133>XP_006720920 Length = 785 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ASLAKELTH 9 ASLA +++H Sbjct: 126 ASLAADISH 134>XP_005255213 Length = 836 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ASLAKELTH 9 ASLA +++H Sbjct: 178 ASLAADISH 186>XP_005255212 Length = 837 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ASLAKELTH 9 ASLA +++H Sbjct: 178 ASLAADISH 186>XP_005255192 Length = 508 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ASLAKELTH 9 ASL EL H Sbjct: 293 ASLQSELAH 301>XP_006720913 Length = 508 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ASLAKELTH 9 ASL EL H Sbjct: 293 ASLQSELAH 301>XP_005263495 Length = 2549 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ASLAKELTH 9 A AKEL H Sbjct: 38 AKAAKELQH 46Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.305 0.113 0.280 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 465,000 Number of extensions: 733 Number of successful extensions: 32 Number of sequences better than 10000.0: 32 Number of HSP's gapped: 32 Number of HSP's successfully gapped: 32 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |