Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 18 1135 NP_671714 18 1135 XP_006715890 18 1135 XP_005250160 18 1135 XP_005250159 18 1135 NP_001160071 16 5631 NP_001160072 16 5631 NP_001164227 16 5631 NP_660327 16 5631 NP_036233 16 5631 NP_079001 16 5631 NP_001007034 16 5631 XP_006724796 16 5631 XP_006724795 16 5631 XP_006724794 16 5631 XP_006724793 16 5631 XP_006718975 16 5631 XP_006718974 16 5631 XP_006718973 16 5631 XP_006718972 16 5631 XP_005274350 16 5631 XP_005274349 16 5631 XP_005271544 16 5631 XP_005245269 16 5631 XP_006711403 16 5631 NP_036387 16 5631 NP_653300 16 5631 NP_001001734 16 5631 NP_000193 16 7355 NP_006114 16 7355 NP_689896 16 7355 NP_006644 16 7355 XP_005262875 16 7355 XP_005262874 16 7355 XP_005262873 16 7355 XP_005262872 16 7355 XP_005262871 16 7355 XP_005262870 16 7355 XP_005262868 16 7355 XP_005262867 16 7355 NP_001946 15 9605 NP_001161791 15 9605 NP_060485 15 9605 NP_001186064 15 9605 NP_597841 15 9605 NP_004171 15 9605 NP_065784 15 9605 XP_005247723 15 9605 XP_005246268 15 9605 XP_005246267 15 9605 XP_005246265 15 9605 XP_005246264 15 9605 XP_005246263 15 9605>NP_005742 Length = 3907 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ASETRRNST 9 ASET RNST Sbjct: 247 ASETLRNST 255>NP_671714 Length = 3899 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ASETRRNST 9 ASET RNST Sbjct: 247 ASETLRNST 255>XP_006715890 Length = 3860 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ASETRRNST 9 ASET RNST Sbjct: 247 ASETLRNST 255>XP_005250160 Length = 3939 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ASETRRNST 9 ASET RNST Sbjct: 247 ASETLRNST 255>XP_005250159 Length = 3952 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ASETRRNST 9 ASET RNST Sbjct: 247 ASETLRNST 255>NP_001160071 Length = 247 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TRRNST 9 TRRNST Sbjct: 46 TRRNST 51>NP_001160072 Length = 241 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TRRNST 9 TRRNST Sbjct: 46 TRRNST 51>NP_001164227 Length = 266 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TRRNST 9 TRRNST Sbjct: 46 TRRNST 51>NP_660327 Length = 248 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TRRNST 9 TRRNST Sbjct: 46 TRRNST 51>NP_036233 Length = 588 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ETRRNS 8 ETRRNS Sbjct: 147 ETRRNS 152>NP_079001 Length = 544 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ETRRNS 8 ETRRNS Sbjct: 8 ETRRNS 13>NP_001007034 Length = 209 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ETRRNS 8 ETRRNS Sbjct: 195 ETRRNS 200>XP_006724796 Length = 223 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TRRNST 9 TRRNST Sbjct: 46 TRRNST 51>XP_006724795 Length = 242 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TRRNST 9 TRRNST Sbjct: 46 TRRNST 51>XP_006724794 Length = 252 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TRRNST 9 TRRNST Sbjct: 46 TRRNST 51>XP_006724793 Length = 267 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TRRNST 9 TRRNST Sbjct: 46 TRRNST 51>XP_006718975 Length = 495 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ETRRNS 8 ETRRNS Sbjct: 8 ETRRNS 13>XP_006718974 Length = 521 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ETRRNS 8 ETRRNS Sbjct: 8 ETRRNS 13>XP_006718973 Length = 521 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ETRRNS 8 ETRRNS Sbjct: 8 ETRRNS 13>XP_006718972 Length = 537 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ETRRNS 8 ETRRNS Sbjct: 8 ETRRNS 13>XP_005274350 Length = 544 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ETRRNS 8 ETRRNS Sbjct: 8 ETRRNS 13>XP_005274349 Length = 544 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ETRRNS 8 ETRRNS Sbjct: 8 ETRRNS 13>XP_005271544 Length = 588 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ETRRNS 8 ETRRNS Sbjct: 147 ETRRNS 152>XP_005245269 Length = 532 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SETRRNS 8 S+TRRNS Sbjct: 446 SKTRRNS 452>XP_006711403 Length = 961 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SETRRNS 8 S+TRRNS Sbjct: 875 SKTRRNS 881>NP_036387 Length = 950 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ETRRNS 8 ETRRNS Sbjct: 673 ETRRNS 678>NP_653300 Length = 1029 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SETRRNS 8 S+TRRNS Sbjct: 943 SKTRRNS 949>NP_001001734 Length = 165 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SETRRNS 8 S+TRRNS Sbjct: 79 SKTRRNS 85>NP_000193 Length = 550 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SETRRNST 9 SET+ NST Sbjct: 26 SETQANST 33>NP_006114 Length = 343 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SETRRNST 9 SET+ NST Sbjct: 26 SETQANST 33>NP_689896 Length = 560 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ASETRRNST 9 A ETR N T Sbjct: 484 ADETRSNET 492>NP_006644 Length = 492 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ASETRRNST 9 A +TR NST Sbjct: 480 ARKTRHNST 488>XP_005262875 Length = 328 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ASETRRNST 9 A ETR N T Sbjct: 252 ADETRSNET 260>XP_005262874 Length = 328 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ASETRRNST 9 A ETR N T Sbjct: 252 ADETRSNET 260>XP_005262873 Length = 385 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ASETRRNST 9 A ETR N T Sbjct: 309 ADETRSNET 317>XP_005262872 Length = 385 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ASETRRNST 9 A ETR N T Sbjct: 309 ADETRSNET 317>XP_005262871 Length = 385 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ASETRRNST 9 A ETR N T Sbjct: 309 ADETRSNET 317>XP_005262870 Length = 431 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ASETRRNST 9 A ETR N T Sbjct: 355 ADETRSNET 363>XP_005262868 Length = 559 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ASETRRNST 9 A ETR N T Sbjct: 483 ADETRSNET 491>XP_005262867 Length = 560 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ASETRRNST 9 A ETR N T Sbjct: 484 ADETRSNET 492>NP_001946 Length = 212 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SETRRNS 8 SET RNS Sbjct: 179 SETMRNS 185>NP_001161791 Length = 211 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SETRRNS 8 SET RNS Sbjct: 178 SETMRNS 184>NP_060485 Length = 855 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ASETRRNS 8 ASET RN+ Sbjct: 573 ASETLRNA 580>NP_001186064 Length = 425 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SETRRNS 8 SETR+N+ Sbjct: 82 SETRKNN 88>NP_597841 Length = 119 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SETRRNS 8 SETR+N+ Sbjct: 82 SETRKNN 88>NP_004171 Length = 425 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SETRRNS 8 SETR+N+ Sbjct: 82 SETRKNN 88>NP_065784 Length = 1381 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ASETRRNS 8 A E+RRNS Sbjct: 378 AVESRRNS 385>XP_005247723 Length = 1481 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ASETRRNS 8 A E+RRNS Sbjct: 378 AVESRRNS 385>XP_005246268 Length = 426 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SETRRNS 8 SETR+N+ Sbjct: 83 SETRKNN 89>XP_005246267 Length = 426 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SETRRNS 8 SETR+N+ Sbjct: 83 SETRKNN 89>XP_005246265 Length = 484 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SETRRNS 8 SETR+N+ Sbjct: 141 SETRKNN 147>XP_005246264 Length = 532 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SETRRNS 8 SETR+N+ Sbjct: 189 SETRKNN 195>XP_005246263 Length = 533 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SETRRNS 8 SETR+N+ Sbjct: 190 SETRKNN 196Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.288 0.0952 0.219 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 393,623 Number of extensions: 503 Number of successful extensions: 53 Number of sequences better than 10000.0: 53 Number of HSP's gapped: 53 Number of HSP's successfully gapped: 53 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.0 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |