Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000236 18 1482 NP_001120972 18 1482 XP_006716054 18 1482 XP_006716053 18 1482 XP_006716052 18 1482 XP_006716051 18 1482 NP_570843 17 4312 NP_001128529 17 4312 NP_001137357 16 5631 NP_001137358 16 5631 NP_001231921 16 5631 NP_001231919 16 5631 NP_002471 16 5631 NP_851999 16 5631 NP_001185461 16 5631 NP_001185462 16 5631 XP_005268948 16 5631 XP_005268946 16 5631 XP_005268944 16 5631 XP_005268945 16 5631 XP_005268943 16 5631 XP_005268942 16 5631 XP_006716659 16 5631 XP_005251053 16 5631 XP_005251052 16 5631 XP_006716658 16 5631 XP_005251051 16 5631 XP_005251050 16 5631 XP_006716657 16 5631 NP_060472 16 5631 NP_001244119 16 7355 NP_742017 16 7355 XP_006716259 16 7355 XP_006716258 16 7355 XP_005250789 16 7355 XP_005250788 16 7355 XP_005250787 16 7355 XP_005250786 16 7355 XP_006716257 16 7355 XP_005250785 16 7355 XP_005250784 16 7355 XP_005250783 16 7355 NP_009045 15 9605>NP_000236 Length = 1390 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ARSVSSTTE 9 ARSVS TTE Sbjct: 986 ARSVSPTTE 994>NP_001120972 Length = 1408 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ARSVSSTTE 9 ARSVS TTE Sbjct: 1004 ARSVSPTTE 1012>XP_006716054 Length = 960 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ARSVSSTTE 9 ARSVS TTE Sbjct: 556 ARSVSPTTE 564>XP_006716053 Length = 960 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ARSVSSTTE 9 ARSVS TTE Sbjct: 556 ARSVSPTTE 564>XP_006716052 Length = 1409 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ARSVSSTTE 9 ARSVS TTE Sbjct: 1005 ARSVSPTTE 1013>XP_006716051 Length = 1427 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ARSVSSTTE 9 ARSVS TTE Sbjct: 1023 ARSVSPTTE 1031>NP_570843 Length = 581 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 SVSSTTE 9 SVSSTTE Sbjct: 501 SVSSTTE 507>NP_001128529 Length = 587 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 SVSSTTE 9 SVSSTTE Sbjct: 507 SVSSTTE 513>NP_001137357 Length = 1030 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ARSVSSTTE 9 A +VSSTTE Sbjct: 653 AGTVSSTTE 661>NP_001137358 Length = 943 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ARSVSSTTE 9 A +VSSTTE Sbjct: 566 AGTVSSTTE 574>NP_001231921 Length = 974 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ARSVSSTTE 9 A +VSSTTE Sbjct: 597 AGTVSSTTE 605>NP_001231919 Length = 995 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ARSVSSTTE 9 A +VSSTTE Sbjct: 653 AGTVSSTTE 661>NP_002471 Length = 1030 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ARSVSSTTE 9 A +VSSTTE Sbjct: 653 AGTVSSTTE 661>NP_851999 Length = 839 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ARSVSSTTE 9 AR VSST+E Sbjct: 189 ARVVSSTSE 197>NP_001185461 Length = 874 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ARSVSSTTE 9 AR VSST+E Sbjct: 197 ARVVSSTSE 205>NP_001185462 Length = 873 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ARSVSSTTE 9 AR VSST+E Sbjct: 196 ARVVSSTSE 204>XP_005268948 Length = 990 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ARSVSSTTE 9 A +VSSTTE Sbjct: 597 AGTVSSTTE 605>XP_005268946 Length = 999 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ARSVSSTTE 9 A +VSSTTE Sbjct: 653 AGTVSSTTE 661>XP_005268944 Length = 1005 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ARSVSSTTE 9 A +VSSTTE Sbjct: 653 AGTVSSTTE 661>XP_005268945 Length = 1005 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ARSVSSTTE 9 A +VSSTTE Sbjct: 653 AGTVSSTTE 661>XP_005268943 Length = 1034 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ARSVSSTTE 9 A +VSSTTE Sbjct: 641 AGTVSSTTE 649>XP_005268942 Length = 1046 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ARSVSSTTE 9 A +VSSTTE Sbjct: 653 AGTVSSTTE 661>XP_006716659 Length = 653 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ARSVSSTTE 9 AR VSST+E Sbjct: 197 ARVVSSTSE 205>XP_005251053 Length = 826 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ARSVSSTTE 9 AR VSST+E Sbjct: 127 ARVVSSTSE 135>XP_005251052 Length = 828 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ARSVSSTTE 9 AR VSST+E Sbjct: 129 ARVVSSTSE 137>XP_006716658 Length = 847 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ARSVSSTTE 9 AR VSST+E Sbjct: 197 ARVVSSTSE 205>XP_005251051 Length = 888 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ARSVSSTTE 9 AR VSST+E Sbjct: 189 ARVVSSTSE 197>XP_005251050 Length = 895 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ARSVSSTTE 9 AR VSST+E Sbjct: 196 ARVVSSTSE 204>XP_006716657 Length = 896 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ARSVSSTTE 9 AR VSST+E Sbjct: 197 ARVVSSTSE 205>NP_060472 Length = 846 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ARSVSSTTE 9 AR VSST+E Sbjct: 196 ARVVSSTSE 204>NP_001244119 Length = 999 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ARSVSSTTE 9 A +VSSTTE Sbjct: 897 AFNVSSTTE 905>NP_742017 Length = 984 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ARSVSSTTE 9 A +VSSTTE Sbjct: 897 AFNVSSTTE 905>XP_006716259 Length = 984 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ARSVSSTTE 9 A +VSSTTE Sbjct: 897 AFNVSSTTE 905>XP_006716258 Length = 984 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ARSVSSTTE 9 A +VSSTTE Sbjct: 897 AFNVSSTTE 905>XP_005250789 Length = 984 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ARSVSSTTE 9 A +VSSTTE Sbjct: 897 AFNVSSTTE 905>XP_005250788 Length = 984 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ARSVSSTTE 9 A +VSSTTE Sbjct: 897 AFNVSSTTE 905>XP_005250787 Length = 984 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ARSVSSTTE 9 A +VSSTTE Sbjct: 897 AFNVSSTTE 905>XP_005250786 Length = 984 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ARSVSSTTE 9 A +VSSTTE Sbjct: 897 AFNVSSTTE 905>XP_006716257 Length = 984 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ARSVSSTTE 9 A +VSSTTE Sbjct: 897 AFNVSSTTE 905>XP_005250785 Length = 984 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ARSVSSTTE 9 A +VSSTTE Sbjct: 897 AFNVSSTTE 905>XP_005250784 Length = 1190 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ARSVSSTTE 9 A +VSSTTE Sbjct: 1103 AFNVSSTTE 1111>XP_005250783 Length = 1249 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ARSVSSTTE 9 A +VSSTTE Sbjct: 1162 AFNVSSTTE 1170>NP_009045 Length = 1093 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ARSVSSTT 8 ++SVSSTT Sbjct: 761 SQSVSSTT 768Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.279 0.0881 0.184 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 234,552 Number of extensions: 435 Number of successful extensions: 43 Number of sequences better than 10000.0: 43 Number of HSP's gapped: 43 Number of HSP's successfully gapped: 43 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 18 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |