Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005179 19 869 NP_004044 18 1935 XP_006716415 17 3301 NP_057696 17 3301 NP_115575 17 4312 NP_001231567 17 4312 XP_005252695 17 4312 NP_006014 17 4312 NP_115813 16 5631 NP_000776 16 5631 NP_001269612 16 5631 NP_114403 16 5631 NP_079011 16 5631 XP_005271331 16 5631 XP_006711040 16 5631 XP_006711039 16 5631 NP_079255 16 7355 NP_001007526 16 7355 NP_001277284 16 7355 NP_001106203 16 7355 XP_005268373 16 7355 XP_005268372 16 7355 XP_005268371 16 7355 XP_006720031 16 7355 XP_005268370 16 7355 XP_006720030 16 7355 XP_005268369 16 7355 XP_006720029 16 7355 XP_005268367 16 7355 XP_005268366 16 7355 XP_005268365 16 7355 XP_005268364 16 7355 XP_006714304 16 7355 NP_001013716 16 7355 NP_085131 16 7355 NP_006230 16 7355 NP_060485 15 9605 NP_001171711 15 9605 NP_001274509 15 9605 NP_653184 15 9605 NP_073210 15 9605 NP_001034451 15 9605 NP_071411 15 9605 NP_001166094 15 9605 NP_002490 15 9605 XP_006726466 15 9605 XP_006724394 15 9605 XP_006724393 15 9605 XP_006724392 15 9605 XP_005261339 15 9605 XP_005254473 15 9605 XP_005254472 15 9605 XP_005254471 15 9605 XP_005254470 15 9605 XP_005254469 15 9605 XP_005254468 15 9605 XP_005254467 15 9605 XP_005254465 15 9605 XP_006712969 15 9605 XP_006710208 15 9605 NP_001166095 15 9605>NP_005179 Length = 906 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ARRTLSDI 8 ARRTLSDI Sbjct: 786 ARRTLSDI 793>NP_004044 Length = 437 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 ARRTLSDI 8 ARRTL+DI Sbjct: 143 ARRTLADI 150>XP_006716415 Length = 266 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RRTLSDIF 9 +RTL+D+F Sbjct: 57 KRTLNDVF 64>NP_057696 Length = 338 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RRTLSDIF 9 +RTL+D+F Sbjct: 129 KRTLNDVF 136>NP_115575 Length = 1188 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RRTLSDIF 9 R+T++DIF Sbjct: 766 RKTINDIF 773>NP_001231567 Length = 945 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RRTLSDIF 9 R+T++DIF Sbjct: 523 RKTINDIF 530>XP_005252695 Length = 304 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RTLSDIF 9 +TLSDIF Sbjct: 93 KTLSDIF 99>NP_006014 Length = 336 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RTLSDIF 9 +TLSDIF Sbjct: 125 KTLSDIF 131>NP_115813 Length = 629 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RRTLSDIF 9 + TLSDIF Sbjct: 405 KSTLSDIF 412>NP_000776 Length = 508 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ARRTLSDI 8 ARR+L+DI Sbjct: 33 ARRSLADI 40>NP_001269612 Length = 367 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 RTLSDIF 9 RTL DIF Sbjct: 84 RTLEDIF 90>NP_114403 Length = 167 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ARRTLSDIF 9 A RT+ D+F Sbjct: 83 AERTVEDVF 91>NP_079011 Length = 539 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 RTLSDIF 9 RTL DIF Sbjct: 256 RTLEDIF 262>XP_005271331 Length = 606 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RRTLSDIF 9 + TLSDIF Sbjct: 405 KSTLSDIF 412>XP_006711040 Length = 629 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RRTLSDIF 9 + TLSDIF Sbjct: 405 KSTLSDIF 412>XP_006711039 Length = 642 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RRTLSDIF 9 + TLSDIF Sbjct: 418 KSTLSDIF 425>NP_079255 Length = 1123 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RRTLSDI 8 +RTLSDI Sbjct: 141 QRTLSDI 147>NP_001007526 Length = 1432 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ARRTLSDI 8 ARRTLS + Sbjct: 511 ARRTLSPV 518>NP_001277284 Length = 1429 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ARRTLSDI 8 ARRTLS + Sbjct: 376 ARRTLSPV 383>NP_001106203 Length = 1125 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RRTLSDI 8 +RTLSDI Sbjct: 143 QRTLSDI 149>XP_005268373 Length = 984 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RRTLSDI 8 +RTLSDI Sbjct: 141 QRTLSDI 147>XP_005268372 Length = 1043 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RRTLSDI 8 +RTLSDI Sbjct: 200 QRTLSDI 206>XP_005268371 Length = 1067 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RRTLSDI 8 +RTLSDI Sbjct: 147 QRTLSDI 153>XP_006720031 Length = 1080 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RRTLSDI 8 +RTLSDI Sbjct: 73 QRTLSDI 79>XP_005268370 Length = 1112 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RRTLSDI 8 +RTLSDI Sbjct: 105 QRTLSDI 111>XP_006720030 Length = 1128 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RRTLSDI 8 +RTLSDI Sbjct: 121 QRTLSDI 127>XP_005268369 Length = 1132 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RRTLSDI 8 +RTLSDI Sbjct: 125 QRTLSDI 131>XP_006720029 Length = 1150 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RRTLSDI 8 +RTLSDI Sbjct: 143 QRTLSDI 149>XP_005268367 Length = 1154 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RRTLSDI 8 +RTLSDI Sbjct: 147 QRTLSDI 153>XP_005268366 Length = 1180 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RRTLSDI 8 +RTLSDI Sbjct: 173 QRTLSDI 179>XP_005268365 Length = 1182 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RRTLSDI 8 +RTLSDI Sbjct: 200 QRTLSDI 206>XP_005268364 Length = 1207 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RRTLSDI 8 +RTLSDI Sbjct: 200 QRTLSDI 206>XP_006714304 Length = 598 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RTLSDIF 9 RTL D+F Sbjct: 269 RTLQDVF 275>NP_001013716 Length = 339 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TLSDIF 9 TLSDIF Sbjct: 103 TLSDIF 108>NP_085131 Length = 1019 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ARRTLSDIF 9 A RTL DI+ Sbjct: 185 ATRTLMDIY 193>NP_006230 Length = 753 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RTLSDIF 9 RTL D+F Sbjct: 269 RTLQDVF 275>NP_060485 Length = 855 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ARRTLSD 7 AR+T+SD Sbjct: 672 ARKTISD 678>NP_001171711 Length = 758 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ARRTLSD 7 AR+T+SD Sbjct: 575 ARKTISD 581>NP_001274509 Length = 255 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TLSDIF 9 TLSD+F Sbjct: 124 TLSDVF 129>NP_653184 Length = 381 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RTLSDI 8 RTLSDI Sbjct: 163 RTLSDI 168>NP_073210 Length = 476 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ARRTLSDIF 9 ARR SD F Sbjct: 468 ARRKASDFF 476>NP_001034451 Length = 427 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RTLSDI 8 RTLSDI Sbjct: 163 RTLSDI 168>NP_071411 Length = 322 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TLSDIF 9 TLSD+F Sbjct: 191 TLSDVF 196>NP_001166094 Length = 1408 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ARRTLSDI 8 A RTLSD+ Sbjct: 625 AVRTLSDV 632>NP_002490 Length = 1461 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ARRTLSDI 8 A RTLSD+ Sbjct: 625 AVRTLSDV 632>XP_006726466 Length = 1310 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ARRTLSD 7 ARR LSD Sbjct: 724 ARRALSD 730>XP_006724394 Length = 397 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ARRTLSDIF 9 ARR SD F Sbjct: 389 ARRKASDFF 397>XP_006724393 Length = 398 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ARRTLSDIF 9 ARR SD F Sbjct: 390 ARRKASDFF 398>XP_006724392 Length = 398 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ARRTLSDIF 9 ARR SD F Sbjct: 390 ARRKASDFF 398>XP_005261339 Length = 477 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ARRTLSDIF 9 ARR SD F Sbjct: 469 ARRKASDFF 477>XP_005254473 Length = 1408 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ARRTLSDI 8 A RTLSD+ Sbjct: 625 AVRTLSDV 632>XP_005254472 Length = 1428 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ARRTLSDI 8 A RTLSD+ Sbjct: 645 AVRTLSDV 652>XP_005254471 Length = 1450 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ARRTLSDI 8 A RTLSD+ Sbjct: 625 AVRTLSDV 632>XP_005254470 Length = 1454 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ARRTLSDI 8 A RTLSD+ Sbjct: 645 AVRTLSDV 652>XP_005254469 Length = 1461 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ARRTLSDI 8 A RTLSD+ Sbjct: 625 AVRTLSDV 632>XP_005254468 Length = 1465 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ARRTLSDI 8 A RTLSD+ Sbjct: 645 AVRTLSDV 652>XP_005254467 Length = 1470 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ARRTLSDI 8 A RTLSD+ Sbjct: 645 AVRTLSDV 652>XP_005254465 Length = 1481 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ARRTLSDI 8 A RTLSD+ Sbjct: 645 AVRTLSDV 652>XP_006712969 Length = 1310 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ARRTLSD 7 ARR LSD Sbjct: 724 ARRALSD 730>XP_006710208 Length = 666 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ARRTLSD 7 ARR LSD Sbjct: 80 ARRALSD 86>NP_001166095 Length = 1450 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ARRTLSDI 8 A RTLSD+ Sbjct: 625 AVRTLSDV 632Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.338 0.143 0.388 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 385,796 Number of extensions: 655 Number of successful extensions: 61 Number of sequences better than 10000.0: 61 Number of HSP's gapped: 61 Number of HSP's successfully gapped: 61 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |