Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004110 21 229 NP_000213 20 390 NP_001087241 20 390 XP_005265799 20 390 XP_005265798 20 390 XP_005265797 20 390 NP_938056 19 869 NP_001243543 19 869 NP_938055 19 869 NP_001243542 19 869 NP_872395 19 869 XP_005247433 19 869 NP_005202 18 1935 NP_001275634 18 1935 NP_000042 16 5631 NP_001073936 16 5631 XP_006718908 16 5631 XP_005271621 16 5631 XP_006718907 16 5631 XP_006718906 16 5631 XP_005271619 16 5631 XP_005271618 16 5631 NP_001107854 16 7355 NP_001070651 16 7355 NP_000539 16 7355 NP_055692 16 7355 XP_006722279 16 7355 XP_006722278 16 7355 XP_005257947 16 7355 XP_005257946 16 7355 XP_005257945 16 7355 XP_006722277 16 7355 XP_005255589 16 7355 XP_005255588 16 7355 XP_005255587 16 7355 XP_005255586 16 7355 XP_005255585 16 7355 XP_005255584 16 7355 XP_006715729 16 7355 XP_006715728 16 7355 XP_006715727 16 7355 XP_006715726 16 7355 NP_872352 16 7355 NP_005674 15 9605 NP_002323 15 9605 NP_001191742 15 9605 NP_002517 15 9605 NP_777577 15 9605 NP_001230208 15 9605 NP_001271245 15 9605 NP_036367 15 9605 NP_001120686 15 9605 XP_005265024 15 9605 XP_006713097 15 9605 XP_005247009 15 9605>NP_004110 Length = 993 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ARNVLATHG 9 ARNVL THG Sbjct: 814 ARNVLVTHG 822>NP_000213 Length = 976 Score = 20.0 bits (40), Expect = 390 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ARNVLATHG 9 ARN+L THG Sbjct: 795 ARNILLTHG 803>NP_001087241 Length = 972 Score = 20.0 bits (40), Expect = 390 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ARNVLATHG 9 ARN+L THG Sbjct: 791 ARNILLTHG 799>XP_005265799 Length = 973 Score = 20.0 bits (40), Expect = 390 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ARNVLATHG 9 ARN+L THG Sbjct: 792 ARNILLTHG 800>XP_005265798 Length = 976 Score = 20.0 bits (40), Expect = 390 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ARNVLATHG 9 ARN+L THG Sbjct: 795 ARNILLTHG 803>XP_005265797 Length = 977 Score = 20.0 bits (40), Expect = 390 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ARNVLATHG 9 ARN+L THG Sbjct: 796 ARNILLTHG 804>NP_938056 Length = 456 Score = 18.9 bits (37), Expect = 869 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ARNVLATHG 9 +RN+L THG Sbjct: 205 SRNILQTHG 213>NP_001243543 Length = 482 Score = 18.9 bits (37), Expect = 869 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ARNVLATHG 9 +RN+L THG Sbjct: 231 SRNILQTHG 239>NP_938055 Length = 441 Score = 18.9 bits (37), Expect = 869 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ARNVLATHG 9 +RN+L THG Sbjct: 190 SRNILQTHG 198>NP_001243542 Length = 456 Score = 18.9 bits (37), Expect = 869 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ARNVLATHG 9 +RN+L THG Sbjct: 205 SRNILQTHG 213>NP_872395 Length = 471 Score = 18.9 bits (37), Expect = 869 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ARNVLATHG 9 +RN+L THG Sbjct: 220 SRNILQTHG 228>XP_005247433 Length = 374 Score = 18.9 bits (37), Expect = 869 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ARNVLATHG 9 +RN+L THG Sbjct: 134 SRNILQTHG 142>NP_005202 Length = 972 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ARNVLATHG 9 ARNVL T+G Sbjct: 781 ARNVLLTNG 789>NP_001275634 Length = 972 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ARNVLATHG 9 ARNVL T+G Sbjct: 781 ARNVLLTNG 789>NP_000042 Length = 3056 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RNVLATH 8 RN+L+TH Sbjct: 1859 RNLLSTH 1865>NP_001073936 Length = 1848 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 ARNVLATH 8 ARN LA H Sbjct: 400 ARNALAKH 407>XP_006718908 Length = 1708 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RNVLATH 8 RN+L+TH Sbjct: 511 RNLLSTH 517>XP_005271621 Length = 2708 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RNVLATH 8 RN+L+TH Sbjct: 1511 RNLLSTH 1517>XP_006718907 Length = 3050 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RNVLATH 8 RN+L+TH Sbjct: 1853 RNLLSTH 1859>XP_006718906 Length = 3056 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RNVLATH 8 RN+L+TH Sbjct: 1859 RNLLSTH 1865>XP_005271619 Length = 3056 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RNVLATH 8 RN+L+TH Sbjct: 1859 RNLLSTH 1865>XP_005271618 Length = 3056 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RNVLATH 8 RN+L+TH Sbjct: 1859 RNLLSTH 1865>NP_001107854 Length = 1784 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RNVLATH 8 RN+L TH Sbjct: 261 RNLLGTH 267>NP_001070651 Length = 1740 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RNVLATH 8 RN+L TH Sbjct: 261 RNLLGTH 267>NP_000539 Length = 1807 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RNVLATH 8 RN+L TH Sbjct: 261 RNLLGTH 267>NP_055692 Length = 1942 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NVLATHG 9 N+L THG Sbjct: 1238 NLLQTHG 1244>XP_006722279 Length = 1578 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NVLATHG 9 N+L THG Sbjct: 874 NLLQTHG 880>XP_006722278 Length = 1735 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NVLATHG 9 N+L THG Sbjct: 1031 NLLQTHG 1037>XP_005257947 Length = 1935 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NVLATHG 9 N+L THG Sbjct: 1231 NLLQTHG 1237>XP_005257946 Length = 1943 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NVLATHG 9 N+L THG Sbjct: 1239 NLLQTHG 1245>XP_005257945 Length = 1969 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NVLATHG 9 N+L THG Sbjct: 1265 NLLQTHG 1271>XP_006722277 Length = 1970 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NVLATHG 9 N+L THG Sbjct: 1266 NLLQTHG 1272>XP_005255589 Length = 1831 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RNVLATH 8 RN+L TH Sbjct: 352 RNLLGTH 358>XP_005255588 Length = 1832 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RNVLATH 8 RN+L TH Sbjct: 352 RNLLGTH 358>XP_005255587 Length = 1854 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RNVLATH 8 RN+L TH Sbjct: 352 RNLLGTH 358>XP_005255586 Length = 1855 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RNVLATH 8 RN+L TH Sbjct: 352 RNLLGTH 358>XP_005255585 Length = 1875 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RNVLATH 8 RN+L TH Sbjct: 352 RNLLGTH 358>XP_005255584 Length = 1898 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RNVLATH 8 RN+L TH Sbjct: 352 RNLLGTH 358>XP_006715729 Length = 226 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RNVLATHG 9 RNV AT G Sbjct: 34 RNVTATEG 41>XP_006715728 Length = 228 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RNVLATHG 9 RNV AT G Sbjct: 34 RNVTATEG 41>XP_006715727 Length = 240 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RNVLATHG 9 RNV AT G Sbjct: 34 RNVTATEG 41>XP_006715726 Length = 309 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RNVLATHG 9 RNV AT G Sbjct: 34 RNVTATEG 41>NP_872352 Length = 236 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RNVLATHG 9 RNV AT G Sbjct: 34 RNVTATEG 41>NP_005674 Length = 319 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NVLATHG 9 N+LA HG Sbjct: 38 NLLAIHG 44>NP_002323 Length = 4544 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 ARNVLATH 8 ARN + TH Sbjct: 3850 ARNFMKTH 3857>NP_001191742 Length = 524 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NVLATHG 9 NV+++HG Sbjct: 299 NVISSHG 305>NP_002517 Length = 574 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NVLATHG 9 NV+++HG Sbjct: 299 NVISSHG 305>NP_777577 Length = 576 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ARNVLATH 8 ARNVLA + Sbjct: 537 ARNVLAPY 544>NP_001230208 Length = 576 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ARNVLATH 8 ARNVLA + Sbjct: 537 ARNVLAPY 544>NP_001271245 Length = 311 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ARNVLATH 8 ARNVLA + Sbjct: 272 ARNVLAPY 279>NP_036367 Length = 1279 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RNVLATHG 9 RN+L HG Sbjct: 161 RNLLPEHG 168>NP_001120686 Length = 576 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ARNVLATH 8 ARNVLA + Sbjct: 537 ARNVLAPY 544>XP_005265024 Length = 1278 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RNVLATHG 9 RN+L HG Sbjct: 161 RNLLPEHG 168>XP_006713097 Length = 1279 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RNVLATHG 9 RN+L HG Sbjct: 161 RNLLPEHG 168>XP_005247009 Length = 319 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NVLATHG 9 N+LA HG Sbjct: 38 NLLAIHG 44Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.320 0.128 0.373 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 486,770 Number of extensions: 801 Number of successful extensions: 55 Number of sequences better than 10000.0: 55 Number of HSP's gapped: 55 Number of HSP's successfully gapped: 55 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |