Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006715 19 869 NP_005913 19 869 XP_005267046 19 869 XP_005267045 19 869 NP_001229285 17 3301 NP_001229286 17 3301 NP_004820 17 3301 NP_001138929 17 3301 NP_001138930 17 3301 NP_065194 16 5631 NP_001128360 16 5631 NP_443070 16 5631 NP_958815 16 7355 XP_005255486 16 7355 XP_005255485 16 7355 XP_005255484 16 7355 XP_006720966 16 7355 NP_689935 15 9605 NP_001139281 15 9605 NP_001077422 15 9605 NP_001070654 15 9605 NP_079005 15 9605 NP_071348 15 9605 XP_006726466 15 9605 XP_006723449 15 9605 XP_005271506 15 9605 XP_006718849 15 9605 XP_006712969 15 9605 XP_006712132 15 9605 XP_006712131 15 9605 XP_006712130 15 9605 XP_006712129 15 9605 XP_006712128 15 9605 XP_006712127 15 9605 XP_006712126 15 9605 XP_006712125 15 9605 XP_006712124 15 9605 XP_005275995 15 9605>NP_006715 Length = 1558 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ARERASRAL 9 ARERAS+AL Sbjct: 808 ARERASKAL 816>NP_005913 Length = 1608 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ARERASRAL 9 ARERAS+AL Sbjct: 808 ARERASKAL 816>XP_005267046 Length = 1554 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ARERASRAL 9 ARERAS+AL Sbjct: 808 ARERASKAL 816>XP_005267045 Length = 1604 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ARERASRAL 9 ARERAS+AL Sbjct: 808 ARERASKAL 816>NP_001229285 Length = 209 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 RERASRA 8 RERASRA Sbjct: 189 RERASRA 195>NP_001229286 Length = 192 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 RERASRA 8 RERASRA Sbjct: 172 RERASRA 178>NP_004820 Length = 304 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 RERASRA 8 RERASRA Sbjct: 284 RERASRA 290>NP_001138929 Length = 303 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 RERASRA 8 RERASRA Sbjct: 283 RERASRA 289>NP_001138930 Length = 287 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 RERASRA 8 RERASRA Sbjct: 267 RERASRA 273>NP_065194 Length = 1819 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ARERASRAL 9 ARE ASR L Sbjct: 676 AREAASRVL 684>NP_001128360 Length = 1358 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 ARERASRAL 9 +RE+A+RAL Sbjct: 1310 SREQAARAL 1318>NP_443070 Length = 414 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ARERASRA 8 AR+RASR+ Sbjct: 349 ARDRASRS 356>NP_958815 Length = 371 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ARERASR 7 +RERASR Sbjct: 327 SRERASR 333>XP_005255486 Length = 285 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ARERASR 7 +RERASR Sbjct: 241 SRERASR 247>XP_005255485 Length = 285 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ARERASR 7 +RERASR Sbjct: 241 SRERASR 247>XP_005255484 Length = 318 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ARERASR 7 +RERASR Sbjct: 274 SRERASR 280>XP_006720966 Length = 318 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ARERASR 7 +RERASR Sbjct: 274 SRERASR 280>NP_689935 Length = 416 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ARERASRAL 9 A RASRAL Sbjct: 7 ALSRASRAL 15>NP_001139281 Length = 2036 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RERASRAL 9 RER +RAL Sbjct: 1537 REREARAL 1544>NP_001077422 Length = 1953 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ARERASRAL 9 +RE A+RAL Sbjct: 1362 SREMAARAL 1370>NP_001070654 Length = 2003 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RERASRAL 9 RER +RAL Sbjct: 1504 REREARAL 1511>NP_079005 Length = 1995 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RERASRAL 9 RER +RAL Sbjct: 1496 REREARAL 1503>NP_071348 Length = 1953 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ARERASRAL 9 +RE A+RAL Sbjct: 1362 SREMAARAL 1370>XP_006726466 Length = 1310 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RERASRAL 9 RER+ RAL Sbjct: 135 RERSCRAL 142>XP_006723449 Length = 2003 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RERASRAL 9 RER +RAL Sbjct: 1504 REREARAL 1511>XP_005271506 Length = 415 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ARERASRAL 9 A RASRAL Sbjct: 7 ALSRASRAL 15>XP_006718849 Length = 423 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ARERASRAL 9 A RASRAL Sbjct: 7 ALSRASRAL 15>XP_006712969 Length = 1310 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RERASRAL 9 RER+ RAL Sbjct: 135 RERSCRAL 142>XP_006712132 Length = 1136 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ARERASRAL 9 +RE A+RAL Sbjct: 545 SREMAARAL 553>XP_006712131 Length = 1453 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ARERASRAL 9 +RE A+RAL Sbjct: 1362 SREMAARAL 1370>XP_006712130 Length = 1831 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ARERASRAL 9 +RE A+RAL Sbjct: 1240 SREMAARAL 1248>XP_006712129 Length = 1832 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ARERASRAL 9 +RE A+RAL Sbjct: 1241 SREMAARAL 1249>XP_006712128 Length = 1879 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ARERASRAL 9 +RE A+RAL Sbjct: 1288 SREMAARAL 1296>XP_006712127 Length = 1909 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ARERASRAL 9 +RE A+RAL Sbjct: 1362 SREMAARAL 1370>XP_006712126 Length = 1913 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ARERASRAL 9 +RE A+RAL Sbjct: 1322 SREMAARAL 1330>XP_006712125 Length = 1952 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ARERASRAL 9 +RE A+RAL Sbjct: 1361 SREMAARAL 1369>XP_006712124 Length = 1953 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ARERASRAL 9 +RE A+RAL Sbjct: 1362 SREMAARAL 1370>XP_005275995 Length = 488 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RERASRAL 9 RER+ RAL Sbjct: 135 RERSCRAL 142Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.321 0.119 0.280 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 293,954 Number of extensions: 290 Number of successful extensions: 38 Number of sequences better than 10000.0: 38 Number of HSP's gapped: 38 Number of HSP's successfully gapped: 38 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |