Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001261 19 665 XP_005271924 19 665 XP_005271923 19 665 NP_001379 18 1482 XP_006721531 18 1482 XP_005256556 18 1482 NP_004138 18 1482 NP_001243481 16 5631 NP_078884 16 5631 XP_006720745 16 5631 XP_005254716 16 5631 XP_006720744 16 5631 XP_006720743 16 5631 XP_006720742 16 5631 XP_006720741 16 5631 XP_006720740 16 5631 NP_060800 15 9605 NP_001120683 15 9605 NP_055895 15 9605 NP_620060 15 9605 NP_620063 15 9605 NP_001245227 15 9605 NP_001245228 15 9605 NP_001245229 15 9605 XP_006718812 15 9605 XP_005274463 15 9605 XP_006718811 15 9605 XP_006718810 15 9605 XP_006718809 15 9605 XP_006718808 15 9605 XP_006718807 15 9605 XP_006718806 15 9605 XP_006718805 15 9605 XP_005274459 15 9605 XP_005274458 15 9605 XP_005274457 15 9605 XP_005270059 15 9605 XP_006717994 15 9605 NP_005314 15 9605>NP_001261 Length = 1710 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ARAKKNKA 8 ARAKKNKA Sbjct: 1334 ARAKKNKA 1341>XP_005271924 Length = 1710 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ARAKKNKA 8 ARAKKNKA Sbjct: 1334 ARAKKNKA 1341>XP_005271923 Length = 1798 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ARAKKNKA 8 ARAKKNKA Sbjct: 1334 ARAKKNKA 1341>NP_001379 Length = 364 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ARAKKNKAT 9 AR +KNKAT Sbjct: 15 ARTQKNKAT 23>XP_006721531 Length = 312 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ARAKKNKAT 9 AR +KNKAT Sbjct: 15 ARTQKNKAT 23>XP_005256556 Length = 385 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ARAKKNKAT 9 AR +KNKAT Sbjct: 15 ARTQKNKAT 23>NP_004138 Length = 367 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ARAKKNKAT 9 AR +KNKAT Sbjct: 16 ARTQKNKAT 24>NP_001243481 Length = 476 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ARAKKNKAT 9 +R KK+KAT Sbjct: 381 SRKKKSKAT 389>NP_078884 Length = 390 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ARAKKNKAT 9 +R KK+KAT Sbjct: 295 SRKKKSKAT 303>XP_006720745 Length = 390 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ARAKKNKAT 9 +R KK+KAT Sbjct: 295 SRKKKSKAT 303>XP_005254716 Length = 390 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ARAKKNKAT 9 +R KK+KAT Sbjct: 295 SRKKKSKAT 303>XP_006720744 Length = 390 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ARAKKNKAT 9 +R KK+KAT Sbjct: 295 SRKKKSKAT 303>XP_006720743 Length = 390 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ARAKKNKAT 9 +R KK+KAT Sbjct: 295 SRKKKSKAT 303>XP_006720742 Length = 433 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ARAKKNKAT 9 +R KK+KAT Sbjct: 338 SRKKKSKAT 346>XP_006720741 Length = 436 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ARAKKNKAT 9 +R KK+KAT Sbjct: 341 SRKKKSKAT 349>XP_006720740 Length = 467 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ARAKKNKAT 9 +R KK+KAT Sbjct: 372 SRKKKSKAT 380>NP_060800 Length = 456 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 AKKNKAT 9 AKK KAT Sbjct: 388 AKKEKAT 394>NP_001120683 Length = 631 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 AKKNKAT 9 AKK KAT Sbjct: 388 AKKEKAT 394>NP_055895 Length = 1712 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ARAKKNK 7 ++AKKNK Sbjct: 1700 SKAKKNK 1706>NP_620060 Length = 1642 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ARAKKNK 7 ++AKKNK Sbjct: 1630 SKAKKNK 1636>NP_620063 Length = 666 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ARAKKNK 7 ++AKKNK Sbjct: 654 SKAKKNK 660>NP_001245227 Length = 571 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 AKKNKAT 9 AKK KAT Sbjct: 328 AKKEKAT 334>NP_001245228 Length = 558 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 AKKNKAT 9 AKK KAT Sbjct: 388 AKKEKAT 394>NP_001245229 Length = 498 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 AKKNKAT 9 AKK KAT Sbjct: 328 AKKEKAT 334>XP_006718812 Length = 1226 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ARAKKNK 7 ++AKKNK Sbjct: 1214 SKAKKNK 1220>XP_005274463 Length = 974 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ARAKKNK 7 ++AKKNK Sbjct: 962 SKAKKNK 968>XP_006718811 Length = 1420 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ARAKKNK 7 ++AKKNK Sbjct: 1408 SKAKKNK 1414>XP_006718810 Length = 1450 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ARAKKNK 7 ++AKKNK Sbjct: 1438 SKAKKNK 1444>XP_006718809 Length = 1450 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ARAKKNK 7 ++AKKNK Sbjct: 1438 SKAKKNK 1444>XP_006718808 Length = 1454 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ARAKKNK 7 ++AKKNK Sbjct: 1442 SKAKKNK 1448>XP_006718807 Length = 1464 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ARAKKNK 7 ++AKKNK Sbjct: 1452 SKAKKNK 1458>XP_006718806 Length = 1474 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ARAKKNK 7 ++AKKNK Sbjct: 1462 SKAKKNK 1468>XP_006718805 Length = 1484 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ARAKKNK 7 ++AKKNK Sbjct: 1472 SKAKKNK 1478>XP_005274459 Length = 1503 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ARAKKNK 7 ++AKKNK Sbjct: 1491 SKAKKNK 1497>XP_005274458 Length = 1511 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ARAKKNK 7 ++AKKNK Sbjct: 1499 SKAKKNK 1505>XP_005274457 Length = 1705 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ARAKKNK 7 ++AKKNK Sbjct: 1693 SKAKKNK 1699>XP_005270059 Length = 573 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 AKKNKAT 9 AKK KAT Sbjct: 388 AKKEKAT 394>XP_006717994 Length = 617 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 AKKNKAT 9 AKK KAT Sbjct: 388 AKKEKAT 394>NP_005314 Length = 207 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RAKKNKAT 9 RAKK +AT Sbjct: 152 RAKKPRAT 159Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ARAKKNKAT 9 ARA K+K T Sbjct: 185 ARASKSKLT 193Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.297 0.101 0.239 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 387,647 Number of extensions: 371 Number of successful extensions: 40 Number of sequences better than 10000.0: 39 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |