Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_444256 18 1135 NP_444254 18 1135 NP_444253 18 1135 NP_444255 18 1135 XP_005247551 18 1135 XP_005247550 18 1135 XP_006713712 18 1135 XP_005247549 18 1135 NP_689585 17 2528 NP_114088 17 2528 NP_061721 17 2528 NP_001398 16 5631 NP_064546 16 5631 NP_001155955 16 5631 NP_116753 16 5631 NP_116754 16 5631 NP_001265548 16 5631 NP_116755 16 5631 NP_116749 16 5631 NP_001161834 16 5631 NP_001161832 16 5631 NP_116750 16 5631 NP_001161833 16 5631 NP_116751 16 5631 NP_001161835 16 5631 NP_055337 16 5631 NP_001165405 16 7355 NP_001165404 16 7355 NP_071407 16 7355 NP_543016 16 7355 NP_689854 16 7355 XP_006719336 16 7355 XP_006719335 16 7355 XP_006718005 16 7355 XP_006718004 16 7355 XP_006718003 16 7355 XP_005275746 16 7355 XP_003403671 16 7355 XP_006710003 16 7355 NP_473446 15 9605 NP_078858 15 9605 NP_001278232 15 9605 NP_001278214 15 9605 NP_003731 15 9605 NP_002638 15 9605 NP_001399 15 9605 XP_005249513 15 9605 XP_006710468 15 9605 XP_005270637 15 9605 NP_061741 15 9605 NP_114475 15 9605 NP_114443 15 9605 NP_061742 15 9605>NP_444256 Length = 1794 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AQVTLTVVD 9 AQV LTVVD Sbjct: 1252 AQVNLTVVD 1260>NP_444254 Length = 1845 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AQVTLTVVD 9 AQV LTVVD Sbjct: 1252 AQVNLTVVD 1260>NP_444253 Length = 1914 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AQVTLTVVD 9 AQV LTVVD Sbjct: 1321 AQVNLTVVD 1329>NP_444255 Length = 1863 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AQVTLTVVD 9 AQV LTVVD Sbjct: 1321 AQVNLTVVD 1329>XP_005247551 Length = 1855 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AQVTLTVVD 9 AQV LTVVD Sbjct: 1262 AQVNLTVVD 1270>XP_005247550 Length = 1856 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AQVTLTVVD 9 AQV LTVVD Sbjct: 1331 AQVNLTVVD 1339>XP_006713712 Length = 1923 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AQVTLTVVD 9 AQV LTVVD Sbjct: 1331 AQVNLTVVD 1339>XP_005247549 Length = 1924 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AQVTLTVVD 9 AQV LTVVD Sbjct: 1331 AQVNLTVVD 1339>NP_689585 Length = 1437 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 QVTLTVVD 9 Q+TLT+VD Sbjct: 1090 QITLTLVD 1097>NP_114088 Length = 818 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AQVTLTVVD 9 AQVT+ VVD Sbjct: 217 AQVTIIVVD 225>NP_061721 Length = 963 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AQVTLTVVD 9 AQVT+ VVD Sbjct: 217 AQVTIIVVD 225>NP_001398 Length = 3312 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AQVTLTVVD 9 A VT+TV+D Sbjct: 740 ASVTVTVLD 748>NP_064546 Length = 150 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VTLTVVD 9 VT+TVVD Sbjct: 22 VTMTVVD 28>NP_001155955 Length = 96 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VTLTVVD 9 VT+TVVD Sbjct: 22 VTMTVVD 28>NP_116753 Length = 1037 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AQVTLTVVD 9 A+VT+ VVD Sbjct: 678 AKVTINVVD 686>NP_116754 Length = 1048 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AQVTLTVVD 9 A+VT+ VVD Sbjct: 689 AKVTINVVD 697>NP_001265548 Length = 1037 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AQVTLTVVD 9 A+VT+ VVD Sbjct: 678 AKVTINVVD 686>NP_116755 Length = 1340 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AQVTLTVVD 9 A+VT+ VVD Sbjct: 689 AKVTINVVD 697>NP_116749 Length = 1025 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AQVTLTVVD 9 A+VT+ VVD Sbjct: 657 AKVTINVVD 665>NP_001161834 Length = 1310 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AQVTLTVVD 9 A+VT+ VVD Sbjct: 657 AKVTINVVD 665>NP_001161832 Length = 1339 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AQVTLTVVD 9 A+VT+ VVD Sbjct: 657 AKVTINVVD 665>NP_116750 Length = 1347 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AQVTLTVVD 9 A+VT+ VVD Sbjct: 657 AKVTINVVD 665>NP_001161833 Length = 1065 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AQVTLTVVD 9 A+VT+ VVD Sbjct: 657 AKVTINVVD 665>NP_116751 Length = 1337 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AQVTLTVVD 9 A+VT+ VVD Sbjct: 657 AKVTINVVD 665>NP_001161835 Length = 1329 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AQVTLTVVD 9 A+VT+ VVD Sbjct: 657 AKVTINVVD 665>NP_055337 Length = 1021 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AQVTLTVVD 9 A+VT+ VVD Sbjct: 657 AKVTINVVD 665>NP_001165405 Length = 1079 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QVTLTVVD 9 +VTL+V+D Sbjct: 15 EVTLSVID 22>NP_001165404 Length = 1114 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QVTLTVVD 9 +VTL+V+D Sbjct: 15 EVTLSVID 22>NP_071407 Length = 3354 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QVTLTVVD 9 +VTL+V+D Sbjct: 2255 EVTLSVID 2262>NP_543016 Length = 464 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QVTLTVVD 9 QVT+ VVD Sbjct: 126 QVTIEVVD 133>NP_689854 Length = 1835 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QVTLTVV 8 QVT+TVV Sbjct: 1171 QVTITVV 1177>XP_006719336 Length = 1779 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QVTLTVV 8 QVT+TVV Sbjct: 1115 QVTITVV 1121>XP_006719335 Length = 1793 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QVTLTVV 8 QVT+TVV Sbjct: 1171 QVTITVV 1177>XP_006718005 Length = 3397 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QVTLTVVD 9 +VTL+V+D Sbjct: 2298 EVTLSVID 2305>XP_006718004 Length = 3399 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QVTLTVVD 9 +VTL+V+D Sbjct: 2300 EVTLSVID 2307>XP_006718003 Length = 3419 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QVTLTVVD 9 +VTL+V+D Sbjct: 2320 EVTLSVID 2327>XP_005275746 Length = 3352 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QVTLTVVD 9 +VTL+V+D Sbjct: 2253 EVTLSVID 2260>XP_003403671 Length = 3354 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QVTLTVVD 9 +VTL+V+D Sbjct: 2255 EVTLSVID 2262>XP_006710003 Length = 3374 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QVTLTVVD 9 +VTL+V+D Sbjct: 2275 EVTLSVID 2282>NP_473446 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VTLTVVD 9 +TLT+VD Sbjct: 44 ITLTLVD 50>NP_078858 Length = 4981 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AQVTLTVVD 9 A VT+TV+D Sbjct: 777 AIVTITVLD 785>NP_001278232 Length = 4983 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AQVTLTVVD 9 A VT+TV+D Sbjct: 777 AIVTITVLD 785>NP_001278214 Length = 4982 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AQVTLTVVD 9 A VT+TV+D Sbjct: 777 AIVTITVLD 785>NP_003731 Length = 499 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AQVTLTVV 8 AQ+T TV+ Sbjct: 158 AQITCTVI 165>NP_002638 Length = 887 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AQVTLTVVD 9 AQV LT+ D Sbjct: 104 AQVALTIWD 112>NP_001399 Length = 2923 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QVTLTVVD 9 +VT+TV+D Sbjct: 906 EVTVTVLD 913>XP_005249513 Length = 496 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AQVTLTVV 8 AQ+T TV+ Sbjct: 155 AQITCTVI 162>XP_006710468 Length = 2916 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QVTLTVVD 9 +VT+TV+D Sbjct: 906 EVTVTVLD 913>XP_005270637 Length = 2921 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QVTLTVVD 9 +VT+TV+D Sbjct: 906 EVTVTVLD 913>NP_061741 Length = 931 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VTLTVVD 9 +TLTV+D Sbjct: 420 ITLTVMD 426>NP_114475 Length = 818 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AQVTLTVVD 9 AQ+ +TV+D Sbjct: 226 AQILVTVLD 234>NP_114443 Length = 813 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VTLTVVD 9 +TLTV+D Sbjct: 420 ITLTVMD 426>NP_061742 Length = 932 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AQVTLTVVD 9 AQ+ +TV+D Sbjct: 226 AQILVTVLD 234Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.318 0.126 0.303 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 260,134 Number of extensions: 275 Number of successful extensions: 53 Number of sequences better than 10000.0: 53 Number of HSP's gapped: 53 Number of HSP's successfully gapped: 53 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |