Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_036213 16 5631 XP_006714638 16 5631 XP_006714637 16 5631 NP_005337 16 7355 NP_005336 16 7355 NP_000855 16 7355 NP_620706 15 9605 NP_003066 15 9605 NP_001123892 15 9605 NP_443148 15 9605 NP_005112 15 9605 XP_006721725 15 9605 XP_006721723 15 9605 XP_005269161 15 9605 XP_005269160 15 9605 XP_005269159 15 9605 XP_005269158 15 9605>NP_036213 Length = 640 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AQRKRIS 7 AQRKR+S Sbjct: 574 AQRKRLS 580>XP_006714638 Length = 585 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AQRKRIS 7 AQRKR+S Sbjct: 519 AQRKRLS 525>XP_006714637 Length = 589 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AQRKRIS 7 AQRKR+S Sbjct: 574 AQRKRLS 580>NP_005337 Length = 641 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QRKRISAR 9 QR+R+SA+ Sbjct: 532 QRERVSAK 539>NP_005336 Length = 641 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QRKRISAR 9 QR+R+SA+ Sbjct: 532 QRERVSAK 539>NP_000855 Length = 377 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QRKRISA 8 +RKRISA Sbjct: 287 ERKRISA 293>NP_620706 Length = 1130 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 AQRKRISAR 9 ++RK+ISA+ Sbjct: 267 SRRKKISAK 275>NP_003066 Length = 1214 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 AQRKRISAR 9 ++RK+ISA+ Sbjct: 267 SRRKKISAK 275>NP_001123892 Length = 1152 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 AQRKRISAR 9 ++RK+ISA+ Sbjct: 267 SRRKKISAK 275>NP_443148 Length = 679 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AQRKRISA 8 AQR+R+S+ Sbjct: 654 AQRRRLSS 661>NP_005112 Length = 2174 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AQRKRISAR 9 A+RK+ SAR Sbjct: 1828 ARRKKSSAR 1836>XP_006721725 Length = 613 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AQRKRISA 8 AQR+R+S+ Sbjct: 588 AQRRRLSS 595>XP_006721723 Length = 680 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AQRKRISA 8 AQR+R+S+ Sbjct: 655 AQRRRLSS 662>XP_005269161 Length = 1151 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 AQRKRISAR 9 ++RK+ISA+ Sbjct: 267 SRRKKISAK 275>XP_005269160 Length = 1213 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 AQRKRISAR 9 ++RK+ISA+ Sbjct: 267 SRRKKISAK 275>XP_005269159 Length = 1244 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 AQRKRISAR 9 ++RK+ISA+ Sbjct: 267 SRRKKISAK 275>XP_005269158 Length = 1245 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 AQRKRISAR 9 ++RK+ISA+ Sbjct: 267 SRRKKISAK 275Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.327 0.124 0.296 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 380,877 Number of extensions: 506 Number of successful extensions: 17 Number of sequences better than 10000.0: 17 Number of HSP's gapped: 17 Number of HSP's successfully gapped: 17 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |