Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 20 299 NP_671714 20 299 XP_006715890 20 299 XP_005250160 20 299 XP_005250159 20 299 NP_861521 17 2528 NP_001268373 17 2528 NP_861520 17 2528 NP_001268374 17 2528 NP_008997 17 2528 NP_001106970 17 4312 NP_878250 17 4312 XP_006720131 17 4312 NP_997192 16 5631 XP_006717380 16 5631 NP_001128360 16 7355 NP_003613 16 7355 NP_001185845 16 7355 NP_803193 16 7355 NP_065114 16 7355 NP_001185844 16 7355 NP_006769 16 7355 XP_005256935 16 7355 XP_006719224 16 7355 XP_006719222 16 7355 XP_005253573 16 7355 XP_005253572 16 7355 XP_005253571 16 7355 XP_005253568 16 7355 XP_005253567 16 7355 XP_005253566 16 7355 XP_005253565 16 7355 XP_005253564 16 7355 XP_005253563 16 7355 XP_005253562 16 7355 NP_055531 16 7355 NP_439893 16 7355 NP_003102 15 9605 NP_001017371 15 9605 NP_001166183 15 9605 NP_001170946 15 9605 NP_689794 15 9605 NP_733779 15 9605 NP_008861 15 9605 NP_001271226 15 9605 NP_001271227 15 9605 XP_006724530 15 9605 XP_005274508 15 9605 XP_005254507 15 9605 XP_005254506 15 9605 XP_005254505 15 9605 XP_006720635 15 9605 XP_006720634 15 9605 XP_006715677 15 9605 NP_004564 15 9605>NP_005742 Length = 3907 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AQMQSSDGT 9 AQ+QSSDGT Sbjct: 3324 AQLQSSDGT 3332>NP_671714 Length = 3899 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AQMQSSDGT 9 AQ+QSSDGT Sbjct: 3316 AQLQSSDGT 3324>XP_006715890 Length = 3860 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AQMQSSDGT 9 AQ+QSSDGT Sbjct: 3277 AQLQSSDGT 3285>XP_005250160 Length = 3939 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AQMQSSDGT 9 AQ+QSSDGT Sbjct: 3356 AQLQSSDGT 3364>XP_005250159 Length = 3952 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AQMQSSDGT 9 AQ+QSSDGT Sbjct: 3369 AQLQSSDGT 3377>NP_861521 Length = 76 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 QMQSSDGT 9 Q QSSDGT Sbjct: 66 QPQSSDGT 73>NP_001268373 Length = 76 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 QMQSSDGT 9 Q QSSDGT Sbjct: 66 QPQSSDGT 73>NP_861520 Length = 76 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 QMQSSDGT 9 Q QSSDGT Sbjct: 66 QPQSSDGT 73>NP_001268374 Length = 76 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 QMQSSDGT 9 Q QSSDGT Sbjct: 66 QPQSSDGT 73>NP_008997 Length = 76 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 QMQSSDGT 9 Q QSSDGT Sbjct: 66 QPQSSDGT 73>NP_001106970 Length = 956 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QMQSSDGT 9 QM+S DGT Sbjct: 492 QMESYDGT 499>NP_878250 Length = 727 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QMQSSDGT 9 QM+S DGT Sbjct: 263 QMESYDGT 270>XP_006720131 Length = 957 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QMQSSDGT 9 QM+S DGT Sbjct: 493 QMESYDGT 500>NP_997192 Length = 507 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 AQMQSSDGT 9 AQ+++SDG+ Sbjct: 315 AQLRASDGS 323>XP_006717380 Length = 512 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 AQMQSSDGT 9 AQ+++SDG+ Sbjct: 315 AQLRASDGS 323>NP_001128360 Length = 1358 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QMQSSDGT 9 QM+SS+G+ Sbjct: 22 QMESSEGS 29>NP_003613 Length = 1005 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QMQSSDGT 9 QM+ S+GT Sbjct: 955 QMEDSEGT 962>NP_001185845 Length = 980 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QMQSSDGT 9 QM+ S+GT Sbjct: 930 QMEDSEGT 937>NP_803193 Length = 1011 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QMQSSDGT 9 QM+ S+GT Sbjct: 961 QMEDSEGT 968>NP_065114 Length = 399 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QMQSSDG 8 ++QSSDG Sbjct: 170 ELQSSDG 176>NP_001185844 Length = 858 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QMQSSDGT 9 QM+ S+GT Sbjct: 808 QMEDSEGT 815>NP_006769 Length = 481 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AQMQSSDG 8 AQ++S DG Sbjct: 205 AQLESQDG 212>XP_005256935 Length = 666 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AQMQSSDG 8 AQ+QS DG Sbjct: 335 AQVQSVDG 342>XP_006719224 Length = 991 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QMQSSDGT 9 QM+ S+GT Sbjct: 941 QMEDSEGT 948>XP_006719222 Length = 883 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QMQSSDGT 9 QM+ S+GT Sbjct: 833 QMEDSEGT 840>XP_005253573 Length = 991 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QMQSSDGT 9 QM+ S+GT Sbjct: 941 QMEDSEGT 948>XP_005253572 Length = 994 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QMQSSDGT 9 QM+ S+GT Sbjct: 944 QMEDSEGT 951>XP_005253571 Length = 1002 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QMQSSDGT 9 QM+ S+GT Sbjct: 952 QMEDSEGT 959>XP_005253568 Length = 1014 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QMQSSDGT 9 QM+ S+GT Sbjct: 964 QMEDSEGT 971>XP_005253567 Length = 1025 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QMQSSDGT 9 QM+ S+GT Sbjct: 975 QMEDSEGT 982>XP_005253566 Length = 1025 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QMQSSDGT 9 QM+ S+GT Sbjct: 975 QMEDSEGT 982>XP_005253565 Length = 1026 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QMQSSDGT 9 QM+ S+GT Sbjct: 976 QMEDSEGT 983>XP_005253564 Length = 1033 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QMQSSDGT 9 QM+ S+GT Sbjct: 983 QMEDSEGT 990>XP_005253563 Length = 1036 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QMQSSDGT 9 QM+ S+GT Sbjct: 986 QMEDSEGT 993>XP_005253562 Length = 1036 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QMQSSDGT 9 QM+ S+GT Sbjct: 986 QMEDSEGT 993>NP_055531 Length = 740 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AQMQSSDG 8 AQ+QS DG Sbjct: 409 AQVQSVDG 416>NP_439893 Length = 395 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AQMQSSDG 8 AQ++S DG Sbjct: 205 AQLESQDG 212>NP_003102 Length = 781 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QMQSSDG 8 Q+QS+DG Sbjct: 175 QIQSADG 181>NP_001017371 Length = 713 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QMQSSDG 8 Q+QS+DG Sbjct: 107 QIQSADG 113>NP_001166183 Length = 778 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QMQSSDG 8 Q+QS+DG Sbjct: 172 QIQSADG 178>NP_001170946 Length = 455 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AQMQSSDGT 9 A+M+ S GT Sbjct: 347 AEMEQSSGT 355>NP_689794 Length = 518 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AQMQSSDGT 9 A+M+ S GT Sbjct: 410 AEMEQSSGT 418>NP_733779 Length = 163 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QMQSSDG 8 ++QSSDG Sbjct: 5 KLQSSDG 11>NP_008861 Length = 160 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QMQSSDG 8 ++QSSDG Sbjct: 5 KLQSSDG 11>NP_001271226 Length = 1181 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QMQSSDGT 9 +MQS +GT Sbjct: 524 KMQSDEGT 531>NP_001271227 Length = 1170 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QMQSSDGT 9 +MQS +GT Sbjct: 528 KMQSDEGT 535>XP_006724530 Length = 475 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AQMQSSDGT 9 A+M+ S GT Sbjct: 410 AEMEQSSGT 418>XP_005274508 Length = 486 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AQMQSSDGT 9 A+M+ S GT Sbjct: 410 AEMEQSSGT 418>XP_005254507 Length = 1070 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QMQSSDGT 9 +MQS +GT Sbjct: 528 KMQSDEGT 535>XP_005254506 Length = 1123 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QMQSSDGT 9 +MQS +GT Sbjct: 528 KMQSDEGT 535>XP_005254505 Length = 1124 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QMQSSDGT 9 +MQS +GT Sbjct: 528 KMQSDEGT 535>XP_006720635 Length = 1125 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QMQSSDGT 9 +MQS +GT Sbjct: 528 KMQSDEGT 535>XP_006720634 Length = 1184 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QMQSSDGT 9 +MQS +GT Sbjct: 528 KMQSDEGT 535>XP_006715677 Length = 274 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QMQSSDG 8 Q+Q+SDG Sbjct: 241 QIQTSDG 247>NP_004564 Length = 1185 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QMQSSDGT 9 +MQS +GT Sbjct: 528 KMQSDEGT 535Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.291 0.101 0.244 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 526,502 Number of extensions: 579 Number of successful extensions: 55 Number of sequences better than 10000.0: 55 Number of HSP's gapped: 55 Number of HSP's successfully gapped: 55 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.1 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |