Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value XP_006710602 17 4312 XP_006710601 17 4312 XP_006710598 17 4312 XP_006710597 17 4312 XP_006710596 17 4312 XP_006710595 17 4312 XP_006710594 17 4312 XP_006710593 17 4312 XP_006710592 17 4312 XP_006710591 17 4312 XP_006710590 17 4312 XP_006710589 17 4312 XP_006710588 17 4312 XP_006710586 17 4312 XP_006710585 17 4312 XP_005270755 17 4312 XP_006710584 17 4312 XP_005270754 17 4312 XP_005270753 17 4312 XP_006710583 17 4312 XP_005270752 17 4312 XP_006710582 17 4312 XP_005270751 17 4312 NP_004095 16 5631 NP_001077083 16 5631 NP_439896 16 5631 XP_006721083 16 5631 XP_006715391 16 5631 NP_001277155 16 7355 NP_001277156 16 7355 NP_055998 16 7355 NP_001158136 16 7355 NP_001131074 16 7355 NP_057039 16 7355 NP_056002 16 7355 XP_006714675 16 7355 XP_006714673 16 7355 XP_006714672 16 7355 XP_006714670 16 7355 XP_006714669 16 7355 XP_006714668 16 7355 XP_006714667 16 7355 XP_006714666 16 7355 XP_005248555 16 7355 XP_006714665 16 7355 XP_006714020 16 7355 XP_005248200 16 7355 XP_006714019 16 7355 XP_006712091 16 7355 XP_005264408 16 7355 NP_002486 15 9605 NP_079334 15 9605 NP_001243529 15 9605 NP_001269307 15 9605 NP_001243528 15 9605 NP_001243530 15 9605>XP_006710602 Length = 7391 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AQLDAVSF 8 AQLDA++F Sbjct: 3543 AQLDALAF 3550>XP_006710601 Length = 4720 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AQLDAVSF 8 AQLDA++F Sbjct: 3703 AQLDALAF 3710>XP_006710598 Length = 7553 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AQLDAVSF 8 AQLDA++F Sbjct: 3533 AQLDALAF 3540>XP_006710597 Length = 7451 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AQLDAVSF 8 AQLDA++F Sbjct: 3543 AQLDALAF 3550>XP_006710596 Length = 7512 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AQLDAVSF 8 AQLDA++F Sbjct: 3492 AQLDALAF 3499>XP_006710595 Length = 7526 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AQLDAVSF 8 AQLDA++F Sbjct: 3506 AQLDALAF 3513>XP_006710594 Length = 7528 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AQLDAVSF 8 AQLDA++F Sbjct: 3508 AQLDALAF 3515>XP_006710593 Length = 7539 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AQLDAVSF 8 AQLDA++F Sbjct: 3519 AQLDALAF 3526>XP_006710592 Length = 7544 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AQLDAVSF 8 AQLDA++F Sbjct: 3524 AQLDALAF 3531>XP_006710591 Length = 7558 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AQLDAVSF 8 AQLDA++F Sbjct: 3538 AQLDALAF 3545>XP_006710590 Length = 7563 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AQLDAVSF 8 AQLDA++F Sbjct: 3543 AQLDALAF 3550>XP_006710589 Length = 7595 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AQLDAVSF 8 AQLDA++F Sbjct: 3575 AQLDALAF 3582>XP_006710588 Length = 7614 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AQLDAVSF 8 AQLDA++F Sbjct: 3703 AQLDALAF 3710>XP_006710586 Length = 7645 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AQLDAVSF 8 AQLDA++F Sbjct: 3703 AQLDALAF 3710>XP_006710585 Length = 7657 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AQLDAVSF 8 AQLDA++F Sbjct: 3703 AQLDALAF 3710>XP_005270755 Length = 7663 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AQLDAVSF 8 AQLDA++F Sbjct: 3703 AQLDALAF 3710>XP_006710584 Length = 7686 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AQLDAVSF 8 AQLDA++F Sbjct: 3703 AQLDALAF 3710>XP_005270754 Length = 7694 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AQLDAVSF 8 AQLDA++F Sbjct: 3703 AQLDALAF 3710>XP_005270753 Length = 7700 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AQLDAVSF 8 AQLDA++F Sbjct: 3703 AQLDALAF 3710>XP_006710583 Length = 7702 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AQLDAVSF 8 AQLDA++F Sbjct: 3703 AQLDALAF 3710>XP_005270752 Length = 7717 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AQLDAVSF 8 AQLDA++F Sbjct: 3703 AQLDALAF 3710>XP_006710582 Length = 7720 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AQLDAVSF 8 AQLDA++F Sbjct: 3703 AQLDALAF 3710>XP_005270751 Length = 7723 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AQLDAVSF 8 AQLDA++F Sbjct: 3703 AQLDALAF 3710>NP_004095 Length = 2511 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QLDAVSFA 9 QLD+ SFA Sbjct: 1714 QLDSTSFA 1721>NP_001077083 Length = 523 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AQLDAVS 7 AQLDA+S Sbjct: 433 AQLDAIS 439>NP_439896 Length = 456 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LDAVSFA 9 +DAVSFA Sbjct: 139 MDAVSFA 145>XP_006721083 Length = 534 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AQLDAVS 7 AQLDA+S Sbjct: 433 AQLDAIS 439>XP_006715391 Length = 431 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LDAVSFA 9 +DAVSFA Sbjct: 139 MDAVSFA 145>NP_001277155 Length = 2417 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AQLDAVSF 8 AQ+ AVSF Sbjct: 1542 AQMSAVSF 1549>NP_001277156 Length = 2362 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AQLDAVSF 8 AQ+ AVSF Sbjct: 1487 AQMSAVSF 1494>NP_055998 Length = 2434 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AQLDAVSF 8 AQ+ AVSF Sbjct: 1559 AQMSAVSF 1566>NP_001158136 Length = 2623 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AQLDAVSF 8 AQ+ AVSF Sbjct: 1748 AQMSAVSF 1755>NP_001131074 Length = 274 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QLDAVSFA 9 QLD VSF+ Sbjct: 203 QLDPVSFS 210>NP_057039 Length = 297 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QLDAVSFA 9 QLD VSF+ Sbjct: 226 QLDPVSFS 233>NP_056002 Length = 1132 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QLDAVSFA 9 Q+DA SFA Sbjct: 942 QIDAPSFA 949>XP_006714675 Length = 2275 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AQLDAVSF 8 AQ+ AVSF Sbjct: 1400 AQMSAVSF 1407>XP_006714673 Length = 2362 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AQLDAVSF 8 AQ+ AVSF Sbjct: 1487 AQMSAVSF 1494>XP_006714672 Length = 2414 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AQLDAVSF 8 AQ+ AVSF Sbjct: 1539 AQMSAVSF 1546>XP_006714670 Length = 2425 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AQLDAVSF 8 AQ+ AVSF Sbjct: 1550 AQMSAVSF 1557>XP_006714669 Length = 2429 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AQLDAVSF 8 AQ+ AVSF Sbjct: 1554 AQMSAVSF 1561>XP_006714668 Length = 2429 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AQLDAVSF 8 AQ+ AVSF Sbjct: 1554 AQMSAVSF 1561>XP_006714667 Length = 2432 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AQLDAVSF 8 AQ+ AVSF Sbjct: 1557 AQMSAVSF 1564>XP_006714666 Length = 2432 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AQLDAVSF 8 AQ+ AVSF Sbjct: 1557 AQMSAVSF 1564>XP_005248555 Length = 2626 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AQLDAVSF 8 AQ+ AVSF Sbjct: 1751 AQMSAVSF 1758>XP_006714665 Length = 2651 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AQLDAVSF 8 AQ+ AVSF Sbjct: 1776 AQMSAVSF 1783>XP_006714020 Length = 1097 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QLDAVSFA 9 Q+DA SFA Sbjct: 907 QIDAPSFA 914>XP_005248200 Length = 1103 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QLDAVSFA 9 Q+DA SFA Sbjct: 942 QIDAPSFA 949>XP_006714019 Length = 1104 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QLDAVSFA 9 Q+DA SFA Sbjct: 914 QIDAPSFA 921>XP_006712091 Length = 180 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QLDAVSFA 9 QLD VSF+ Sbjct: 109 QLDPVSFS 116>XP_005264408 Length = 297 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QLDAVSFA 9 QLD VSF+ Sbjct: 226 QLDPVSFS 233>NP_002486 Length = 175 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 DAVSFA 9 DAVSFA Sbjct: 133 DAVSFA 138>NP_079334 Length = 759 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LDAVSF 8 LDAVSF Sbjct: 705 LDAVSF 710>NP_001243529 Length = 717 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LDAVSF 8 LDAVSF Sbjct: 663 LDAVSF 668>NP_001269307 Length = 633 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LDAVSF 8 LDAVSF Sbjct: 579 LDAVSF 584>NP_001243528 Length = 736 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LDAVSF 8 LDAVSF Sbjct: 682 LDAVSF 687>NP_001243530 Length = 746 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LDAVSF 8 LDAVSF Sbjct: 692 LDAVSF 697Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.323 0.124 0.310 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 313,824 Number of extensions: 322 Number of successful extensions: 56 Number of sequences better than 10000.0: 56 Number of HSP's gapped: 56 Number of HSP's successfully gapped: 56 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |