Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000236 20 509 NP_001120972 20 509 XP_006716052 20 509 XP_006716051 20 509 NP_612138 17 4312 NP_001925 17 4312 NP_055714 17 4312 NP_659489 16 7355 NP_001241667 16 7355 NP_001136197 16 7355 NP_542394 16 7355 NP_001002913 16 7355 NP_005159 16 7355 XP_006717018 16 7355 NP_055490 15 9605 NP_037397 15 9605 NP_112190 15 9605 NP_005415 15 9605 NP_057715 15 9605 NP_037461 15 9605 NP_079467 15 9605 NP_065728 15 9605 NP_001240286 15 9605 XP_006725302 15 9605 XP_006725301 15 9605 XP_006725300 15 9605 XP_006725299 15 9605 XP_006724130 15 9605 XP_006724129 15 9605 XP_006720969 15 9605 XP_006720968 15 9605 XP_005255504 15 9605 XP_005255503 15 9605 XP_005245556 15 9605 XP_006711123 15 9605 XP_006711122 15 9605 XP_006711121 15 9605 XP_006711120 15 9605 XP_006711119 15 9605 XP_006710932 15 9605 XP_005271220 15 9605 NP_115976 15 9605>NP_000236 Length = 1390 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AQLARQLGA 9 AQLARQ+GA Sbjct: 327 AQLARQIGA 335>NP_001120972 Length = 1408 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AQLARQLGA 9 AQLARQ+GA Sbjct: 327 AQLARQIGA 335>XP_006716052 Length = 1409 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AQLARQLGA 9 AQLARQ+GA Sbjct: 346 AQLARQIGA 354>XP_006716051 Length = 1427 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AQLARQLGA 9 AQLARQ+GA Sbjct: 346 AQLARQIGA 354>NP_612138 Length = 240 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 AQLARQLG 8 AQLA QLG Sbjct: 148 AQLAAQLG 155>NP_001925 Length = 168 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 AQLARQLG 8 AQLA QLG Sbjct: 76 AQLAAQLG 83>NP_055714 Length = 611 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 QLARQLGA 9 QLA++LGA Sbjct: 163 QLAKELGA 170>NP_659489 Length = 309 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QLARQLGA 9 +L+RQ+GA Sbjct: 101 ELSRQIGA 108>NP_001241667 Length = 244 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AQLARQLGA 9 A +A+Q+GA Sbjct: 163 ANMAKQIGA 171>NP_001136197 Length = 691 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QLARQLG 8 +LARQLG Sbjct: 5 RLARQLG 11>NP_542394 Length = 328 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QLARQLG 8 +LARQLG Sbjct: 5 RLARQLG 11>NP_001002913 Length = 214 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QLARQLG 8 QLAR+LG Sbjct: 55 QLARRLG 61>NP_005159 Length = 244 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AQLARQLGA 9 A +A+Q+GA Sbjct: 163 ANMAKQIGA 171>XP_006717018 Length = 196 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QLARQLG 8 QLAR+LG Sbjct: 68 QLARRLG 74>NP_055490 Length = 2017 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AQLARQL 7 AQL+RQL Sbjct: 837 AQLSRQL 843>NP_037397 Length = 782 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AQLARQLGA 9 A ARQLG+ Sbjct: 338 AAFARQLGS 346>NP_112190 Length = 546 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QLARQLGA 9 Q AR+LGA Sbjct: 128 QRARELGA 135>NP_005415 Length = 1138 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AQLARQLG 8 AQ+A QLG Sbjct: 1101 AQIALQLG 1108>NP_057715 Length = 917 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QLARQLG 8 Q+AR+LG Sbjct: 233 QMARELG 239>NP_037461 Length = 815 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QLARQLG 8 Q+AR+LG Sbjct: 233 QMARELG 239>NP_079467 Length = 932 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QLARQLG 8 Q+A+QLG Sbjct: 181 QMAKQLG 187>NP_065728 Length = 299 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AQLARQLG 8 A LAR+LG Sbjct: 98 ADLARRLG 105>NP_001240286 Length = 1093 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AQLARQLG 8 AQ+A QLG Sbjct: 1056 AQIALQLG 1063>XP_006725302 Length = 235 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AQLARQLG 8 A LAR+LG Sbjct: 34 ADLARRLG 41>XP_006725301 Length = 236 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AQLARQLG 8 A LAR+LG Sbjct: 35 ADLARRLG 42>XP_006725300 Length = 299 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AQLARQLG 8 A LAR+LG Sbjct: 98 ADLARRLG 105>XP_006725299 Length = 299 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AQLARQLG 8 A LAR+LG Sbjct: 98 ADLARRLG 105>XP_006724130 Length = 757 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QLARQLG 8 Q+AR+LG Sbjct: 233 QMARELG 239>XP_006724129 Length = 882 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QLARQLG 8 Q+AR+LG Sbjct: 233 QMARELG 239>XP_006720969 Length = 235 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AQLARQLG 8 A LAR+LG Sbjct: 34 ADLARRLG 41>XP_006720968 Length = 236 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AQLARQLG 8 A LAR+LG Sbjct: 35 ADLARRLG 42>XP_005255504 Length = 299 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AQLARQLG 8 A LAR+LG Sbjct: 98 ADLARRLG 105>XP_005255503 Length = 299 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AQLARQLG 8 A LAR+LG Sbjct: 98 ADLARRLG 105>XP_005245556 Length = 933 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QLARQLG 8 Q+A+QLG Sbjct: 181 QMAKQLG 187>XP_006711123 Length = 1737 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AQLARQL 7 AQL+RQL Sbjct: 799 AQLSRQL 805>XP_006711122 Length = 1918 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AQLARQL 7 AQL+RQL Sbjct: 799 AQLSRQL 805>XP_006711121 Length = 1945 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AQLARQL 7 AQL+RQL Sbjct: 765 AQLSRQL 771>XP_006711120 Length = 1972 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AQLARQL 7 AQL+RQL Sbjct: 799 AQLSRQL 805>XP_006711119 Length = 1979 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AQLARQL 7 AQL+RQL Sbjct: 799 AQLSRQL 805>XP_006710932 Length = 783 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AQLARQLG 8 AQ+A QLG Sbjct: 746 AQIALQLG 753>XP_005271220 Length = 1095 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AQLARQLG 8 AQ+A QLG Sbjct: 1058 AQIALQLG 1065>NP_115976 Length = 1037 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AQLARQLG 8 A LAR+LG Sbjct: 647 AALARELG 654Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.322 0.127 0.320 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 306,922 Number of extensions: 611 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |