Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_064450 19 665 XP_005273257 19 665 NP_079285 16 7355 NP_002215 16 7355 NP_055524 16 7355 XP_006715155 16 7355 XP_006715154 16 7355 XP_006714118 16 7355 NP_001166031 15 9605 NP_001044 15 9605 NP_001185524 15 9605 NP_001185523 15 9605 NP_758515 15 9605 NP_006864 15 9605 NP_006412 15 9605 NP_001185522 15 9605 NP_001073921 15 9605 NP_085058 15 9605 NP_003965 15 9605 XP_005256204 15 9605 XP_005256203 15 9605 XP_006720999 15 9605 XP_005274116 15 9605 XP_006718652 15 9605 XP_005274115 15 9605 XP_005274114 15 9605 XP_006716481 15 9605 XP_005251193 15 9605 XP_005251192 15 9605 XP_005251191 15 9605 XP_006716474 15 9605 XP_005273738 15 9605 XP_005273737 15 9605>NP_064450 Length = 1722 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AQKNAASFD 9 AQ NAASFD Sbjct: 586 AQTNAASFD 594>XP_005273257 Length = 1726 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AQKNAASFD 9 AQ NAASFD Sbjct: 586 AQTNAASFD 594>NP_079285 Length = 1140 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AQKNAASFD 9 A+K +A+FD Sbjct: 57 AEKESANFD 65>NP_002215 Length = 2671 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AQKNAASF 8 AQ+NA+S+ Sbjct: 1562 AQRNASSY 1569>NP_055524 Length = 3546 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AQKNAASFD 9 ++KN A FD Sbjct: 785 SEKNMADFD 793>XP_006715155 Length = 1850 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AQKNAASF 8 AQ+NA+S+ Sbjct: 1591 AQRNASSY 1598>XP_006715154 Length = 2700 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AQKNAASF 8 AQ+NA+S+ Sbjct: 1591 AQRNASSY 1598>XP_006714118 Length = 1129 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AQKNAASFD 9 A+K +A+FD Sbjct: 57 AEKESANFD 65>NP_001166031 Length = 364 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AQKNAASF 8 A +NAASF Sbjct: 97 ATQNAASF 104>NP_001044 Length = 364 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AQKNAASF 8 A +NAASF Sbjct: 97 ATQNAASF 104>NP_001185524 Length = 735 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AQKNAASF 8 A++NA+SF Sbjct: 255 AEENASSF 262>NP_001185523 Length = 1135 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AQKNAASF 8 A++NA+SF Sbjct: 255 AEENASSF 262>NP_758515 Length = 1182 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AQKNAASF 8 A++NA+SF Sbjct: 255 AEENASSF 262>NP_006864 Length = 735 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AQKNAASF 8 A++NA+SF Sbjct: 255 AEENASSF 262>NP_006412 Length = 1849 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AQKNAASFD 9 AQ++A FD Sbjct: 1652 AQRDAVDFD 1660>NP_001185522 Length = 1158 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AQKNAASF 8 A++NA+SF Sbjct: 255 AEENASSF 262>NP_001073921 Length = 543 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QKNAASF 8 QKN++SF Sbjct: 107 QKNSSSF 113>NP_085058 Length = 974 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 QKNAAS 7 QKNAAS Sbjct: 678 QKNAAS 683>NP_003965 Length = 412 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 AQKNAA 6 AQKNAA Sbjct: 244 AQKNAA 249>XP_005256204 Length = 686 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 QKNAAS 7 QKNAAS Sbjct: 390 QKNAAS 395>XP_005256203 Length = 993 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 QKNAAS 7 QKNAAS Sbjct: 697 QKNAAS 702>XP_006720999 Length = 364 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AQKNAASF 8 A +NAASF Sbjct: 97 ATQNAASF 104>XP_005274116 Length = 1602 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AQKNAASFD 9 +QKN+A F+ Sbjct: 411 SQKNSAPFN 419>XP_006718652 Length = 2196 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AQKNAASFD 9 +QKN+A F+ Sbjct: 981 SQKNSAPFN 989>XP_005274115 Length = 2222 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AQKNAASFD 9 +QKN+A F+ Sbjct: 1007 SQKNSAPFN 1015>XP_005274114 Length = 2223 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AQKNAASFD 9 +QKN+A F+ Sbjct: 1008 SQKNSAPFN 1016>XP_006716481 Length = 1649 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AQKNAASFD 9 AQ++A FD Sbjct: 1452 AQRDAVDFD 1460>XP_005251193 Length = 1800 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AQKNAASFD 9 AQ++A FD Sbjct: 1652 AQRDAVDFD 1660>XP_005251192 Length = 1843 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AQKNAASFD 9 AQ++A FD Sbjct: 1646 AQRDAVDFD 1654>XP_005251191 Length = 1849 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AQKNAASFD 9 AQ++A FD Sbjct: 1652 AQRDAVDFD 1660>XP_006716474 Length = 258 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 AQKNAA 6 AQKNAA Sbjct: 90 AQKNAA 95>XP_005273738 Length = 258 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 AQKNAA 6 AQKNAA Sbjct: 90 AQKNAA 95>XP_005273737 Length = 318 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 AQKNAA 6 AQKNAA Sbjct: 150 AQKNAA 155Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.305 0.109 0.276 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 358,220 Number of extensions: 553 Number of successful extensions: 33 Number of sequences better than 10000.0: 33 Number of HSP's gapped: 33 Number of HSP's successfully gapped: 33 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |