Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001243398 20 509 NP_036462 20 509 NP_001243397 20 509 XP_005269721 20 509 NP_002567 17 3301 NP_001122092 17 3301 NP_002568 17 3301 NP_002569 17 3301 NP_001121645 17 3301 NP_001121644 17 3301 NP_001121640 17 3301 NP_001121639 17 3301 NP_001121638 17 3301 XP_005262190 17 3301 XP_006724719 17 3301 XP_006724718 17 3301 XP_006724717 17 3301 XP_005262189 17 3301 XP_006718639 17 3301 XP_006718638 17 3301 XP_006718637 17 3301 XP_006718636 17 3301 XP_005274082 17 3301 XP_006718635 17 3301 NP_001276022 16 5631 NP_001276021 16 5631 NP_002100 16 5631 NP_001244970 16 5631 NP_001244969 16 5631 NP_001276023 16 5631 NP_001244971 16 5631 NP_849144 16 5631 XP_006713662 16 5631 XP_006713661 16 5631 XP_006713660 16 5631 XP_005247434 16 5631 XP_006713659 16 5631 NP_002262 16 7355 NP_071445 16 7355 NP_009211 16 7355 NP_001157994 16 7355 XP_006721306 16 7355 XP_006721305 16 7355 XP_005256141 16 7355 XP_005254110 16 7355 XP_005254109 16 7355 XP_005254106 16 7355 NP_796377 16 7355 NP_689935 15 9605 NP_001271165 15 9605 NP_001098721 15 9605 NP_055548 15 9605 NP_001271166 15 9605 XP_005271506 15 9605 XP_006718849 15 9605 XP_005248691 15 9605 XP_005248689 15 9605>NP_001243398 Length = 1781 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 AQISPDQS 8 AQISPDQS Sbjct: 1335 AQISPDQS 1342>NP_036462 Length = 2073 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 AQISPDQS 8 AQISPDQS Sbjct: 1627 AQISPDQS 1634>NP_001243397 Length = 1890 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 AQISPDQS 8 AQISPDQS Sbjct: 1444 AQISPDQS 1451>XP_005269721 Length = 2073 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 AQISPDQS 8 AQISPDQS Sbjct: 1627 AQISPDQS 1634>NP_002567 Length = 545 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AQISPDQS 8 AQI+P+QS Sbjct: 412 AQITPEQS 419>NP_001122092 Length = 553 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AQISPDQS 8 AQI+P+QS Sbjct: 412 AQITPEQS 419>NP_002568 Length = 524 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AQISPDQS 8 AQI+P+QS Sbjct: 391 AQITPEQS 398>NP_002569 Length = 544 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AQISPDQS 8 AQI+P+QS Sbjct: 410 AQITPEQS 417>NP_001121645 Length = 559 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AQISPDQS 8 AQI+P+QS Sbjct: 425 AQITPEQS 432>NP_001121644 Length = 565 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AQISPDQS 8 AQI+P+QS Sbjct: 431 AQITPEQS 438>NP_001121640 Length = 580 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AQISPDQS 8 AQI+P+QS Sbjct: 446 AQITPEQS 453>NP_001121639 Length = 544 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AQISPDQS 8 AQI+P+QS Sbjct: 410 AQITPEQS 417>NP_001121638 Length = 544 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AQISPDQS 8 AQI+P+QS Sbjct: 410 AQITPEQS 417>XP_005262190 Length = 547 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AQISPDQS 8 AQI+P+QS Sbjct: 410 AQITPEQS 417>XP_006724719 Length = 559 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AQISPDQS 8 AQI+P+QS Sbjct: 425 AQITPEQS 432>XP_006724718 Length = 562 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AQISPDQS 8 AQI+P+QS Sbjct: 425 AQITPEQS 432>XP_006724717 Length = 562 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AQISPDQS 8 AQI+P+QS Sbjct: 425 AQITPEQS 432>XP_005262189 Length = 562 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AQISPDQS 8 AQI+P+QS Sbjct: 425 AQITPEQS 432>XP_006718639 Length = 545 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AQISPDQS 8 AQI+P+QS Sbjct: 412 AQITPEQS 419>XP_006718638 Length = 545 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AQISPDQS 8 AQI+P+QS Sbjct: 412 AQITPEQS 419>XP_006718637 Length = 545 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AQISPDQS 8 AQI+P+QS Sbjct: 412 AQITPEQS 419>XP_006718636 Length = 545 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AQISPDQS 8 AQI+P+QS Sbjct: 412 AQITPEQS 419>XP_005274082 Length = 545 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AQISPDQS 8 AQI+P+QS Sbjct: 412 AQITPEQS 419>XP_006718635 Length = 607 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AQISPDQS 8 AQI+P+QS Sbjct: 474 AQITPEQS 481>NP_001276022 Length = 395 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AQISPDQS 8 AQ+ PD+S Sbjct: 43 AQLGPDES 50>NP_001276021 Length = 435 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AQISPDQS 8 AQ+ PD+S Sbjct: 43 AQLGPDES 50>NP_002100 Length = 509 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AQISPDQS 8 AQ+ PD+S Sbjct: 43 AQLGPDES 50>NP_001244970 Length = 489 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AQISPDQS 8 AQ+ PD+S Sbjct: 43 AQLGPDES 50>NP_001244969 Length = 469 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AQISPDQS 8 AQ+ PD+S Sbjct: 43 AQLGPDES 50>NP_001276023 Length = 480 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AQISPDQS 8 AQ+ PD+S Sbjct: 14 AQLGPDES 21>NP_001244971 Length = 449 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AQISPDQS 8 AQ+ PD+S Sbjct: 43 AQLGPDES 50>NP_849144 Length = 2623 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ISPDQS 8 ISPDQS Sbjct: 1360 ISPDQS 1365>XP_006713662 Length = 1846 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ISPDQS 8 ISPDQS Sbjct: 1432 ISPDQS 1437>XP_006713661 Length = 1860 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ISPDQS 8 ISPDQS Sbjct: 1432 ISPDQS 1437>XP_006713660 Length = 2623 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ISPDQS 8 ISPDQS Sbjct: 1360 ISPDQS 1365>XP_005247434 Length = 2623 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ISPDQS 8 ISPDQS Sbjct: 1360 ISPDQS 1365>XP_006713659 Length = 2695 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ISPDQS 8 ISPDQS Sbjct: 1432 ISPDQS 1437>NP_002262 Length = 1115 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AQISPDQ 7 AQ+SP+Q Sbjct: 1098 AQLSPEQ 1104>NP_071445 Length = 1040 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 AQISPD 6 AQ+SPD Sbjct: 573 AQVSPD 578>NP_009211 Length = 229 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 AQISPDQS 8 ++++PDQS Sbjct: 218 SEVTPDQS 225>NP_001157994 Length = 199 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QISPDQS 8 ++SPDQS Sbjct: 188 KLSPDQS 194>XP_006721306 Length = 793 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 AQISPD 6 AQ+SPD Sbjct: 546 AQVSPD 551>XP_006721305 Length = 985 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 AQISPD 6 AQ+SPD Sbjct: 546 AQVSPD 551>XP_005256141 Length = 1013 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 AQISPD 6 AQ+SPD Sbjct: 546 AQVSPD 551>XP_005254110 Length = 1115 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AQISPDQ 7 AQ+SP+Q Sbjct: 1098 AQLSPEQ 1104>XP_005254109 Length = 1115 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AQISPDQ 7 AQ+SP+Q Sbjct: 1098 AQLSPEQ 1104>XP_005254106 Length = 1115 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AQISPDQ 7 AQ+SP+Q Sbjct: 1098 AQLSPEQ 1104>NP_796377 Length = 199 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QISPDQS 8 ++SPDQS Sbjct: 188 KLSPDQS 194>NP_689935 Length = 416 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ISPDQSV 9 +SPDQ V Sbjct: 195 LSPDQKV 201>NP_001271165 Length = 1539 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QISPDQSV 9 +I PDQ+V Sbjct: 455 KIDPDQTV 462>NP_001098721 Length = 1539 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QISPDQSV 9 +I PDQ+V Sbjct: 455 KIDPDQTV 462>NP_055548 Length = 1539 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QISPDQSV 9 +I PDQ+V Sbjct: 455 KIDPDQTV 462>NP_001271166 Length = 809 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QISPDQSV 9 +I PDQ+V Sbjct: 455 KIDPDQTV 462>XP_005271506 Length = 415 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ISPDQSV 9 +SPDQ V Sbjct: 195 LSPDQKV 201>XP_006718849 Length = 423 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ISPDQSV 9 +SPDQ V Sbjct: 195 LSPDQKV 201>XP_005248691 Length = 816 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QISPDQSV 9 +I PDQ+V Sbjct: 455 KIDPDQTV 462>XP_005248689 Length = 1539 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QISPDQSV 9 +I PDQ+V Sbjct: 455 KIDPDQTV 462Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.301 0.115 0.289 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 714,846 Number of extensions: 749 Number of successful extensions: 57 Number of sequences better than 10000.0: 57 Number of HSP's gapped: 57 Number of HSP's successfully gapped: 57 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |