Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001243398 21 175 NP_036462 21 175 NP_001243397 21 175 XP_005269721 21 175 NP_775082 17 3301 NP_003377 17 3301 NP_003881 17 4312 NP_001622 17 4312 NP_000072 16 5631 NP_055626 16 5631 XP_006719395 16 5631 XP_006717405 16 5631 XP_006717404 16 5631 XP_006717403 16 5631 XP_005263469 16 5631 XP_005263468 16 5631 XP_006711794 16 5631 XP_005273085 16 5631 XP_005273084 16 5631 NP_689850 16 5631 NP_054752 16 5631 NP_000543 16 7355 NP_002448 16 7355 NP_002449 16 7355 NP_689662 16 7355 NP_005952 16 7355 NP_036345 16 7355 NP_005413 16 7355 NP_775871 16 7355 XP_006725823 16 7355 XP_006725595 16 7355 XP_006720458 16 7355 XP_006720457 16 7355 XP_005271710 16 7355 XP_006718462 16 7355 XP_006710008 16 7355 NP_001129386 16 7355 NP_705690 15 9605 NP_036221 15 9605 NP_001171515 15 9605 NP_079533 15 9605 NP_001258740 15 9605 NP_004255 15 9605 NP_919417 15 9605 NP_001103467 15 9605 XP_005256254 15 9605 XP_005267404 15 9605 XP_006711818 15 9605 XP_006711817 15 9605>NP_001243398 Length = 1781 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AQCGMAANF 9 AQC MAANF Sbjct: 1475 AQCSMAANF 1483>NP_036462 Length = 2073 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AQCGMAANF 9 AQC MAANF Sbjct: 1767 AQCSMAANF 1775>NP_001243397 Length = 1890 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AQCGMAANF 9 AQC MAANF Sbjct: 1584 AQCSMAANF 1592>XP_005269721 Length = 2073 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AQCGMAANF 9 AQC MAANF Sbjct: 1767 AQCSMAANF 1775>NP_775082 Length = 2721 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 CGMAANF 9 CGM NF Sbjct: 2066 CGMCGNF 2072>NP_003377 Length = 2812 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 CGMAANF 9 CGM NF Sbjct: 2066 CGMCGNF 2072>NP_003881 Length = 5405 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 AQCGMAANF 9 A CG+ NF Sbjct: 998 ALCGLCGNF 1006Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 5/7 (71%) Query: 3 CGMAANF 9 CG+ NF Sbjct: 4983 CGLCGNF 4989>NP_001622 Length = 528 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 CGMAANF 9 CG+ ANF Sbjct: 120 CGVKANF 126>NP_000072 Length = 3801 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AQCGMAANF 9 A CG++ NF Sbjct: 3503 AICGLSRNF 3511>NP_055626 Length = 1209 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AQCGMAANF 9 A CG+ A+F Sbjct: 97 AVCGLVADF 105>XP_006719395 Length = 244 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 CGMAANF 9 CG ANF Sbjct: 79 CGTGANF 85>XP_006717405 Length = 1209 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AQCGMAANF 9 A CG+ A+F Sbjct: 97 AVCGLVADF 105>XP_006717404 Length = 1209 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AQCGMAANF 9 A CG+ A+F Sbjct: 97 AVCGLVADF 105>XP_006717403 Length = 1209 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AQCGMAANF 9 A CG+ A+F Sbjct: 97 AVCGLVADF 105>XP_005263469 Length = 1209 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AQCGMAANF 9 A CG+ A+F Sbjct: 97 AVCGLVADF 105>XP_005263468 Length = 1209 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AQCGMAANF 9 A CG+ A+F Sbjct: 97 AVCGLVADF 105>XP_006711794 Length = 3022 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AQCGMAANF 9 A CG++ NF Sbjct: 2724 AICGLSRNF 2732>XP_005273085 Length = 3755 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AQCGMAANF 9 A CG++ NF Sbjct: 3457 AICGLSRNF 3465>XP_005273084 Length = 3801 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AQCGMAANF 9 A CG++ NF Sbjct: 3503 AICGLSRNF 3511>NP_689850 Length = 244 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 CGMAANF 9 CG ANF Sbjct: 79 CGTGANF 85>NP_054752 Length = 244 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 CGMAANF 9 CG ANF Sbjct: 79 CGTGANF 85>NP_000543 Length = 2813 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 5/7 (71%) Query: 3 CGMAANF 9 CG+ NF Sbjct: 159 CGLCGNF 165Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 5/7 (71%) Query: 3 CGMAANF 9 CG+ NF Sbjct: 993 CGLCGNF 999>NP_002448 Length = 5179 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 5/7 (71%) Query: 3 CGMAANF 9 CG+ NF Sbjct: 989 CGLCGNF 995>NP_002449 Length = 5762 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 5/7 (71%) Query: 3 CGMAANF 9 CG+ NF Sbjct: 559 CGLCGNF 565Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 5/7 (71%) Query: 3 CGMAANF 9 CG+ NF Sbjct: 1023 CGLCGNF 1029>NP_689662 Length = 297 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 QCGMAAN 8 +C MAAN Sbjct: 59 RCSMAAN 65>NP_005952 Length = 2439 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 5/7 (71%) Query: 3 CGMAANF 9 CG+ NF Sbjct: 173 CGLCGNF 179Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 5/7 (71%) Query: 3 CGMAANF 9 CG+ NF Sbjct: 999 CGLCGNF 1005>NP_036345 Length = 493 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 CGMAANF 9 CG+ AN+ Sbjct: 448 CGLMANY 454>NP_005413 Length = 2155 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 5/7 (71%) Query: 3 CGMAANF 9 CG+ NF Sbjct: 1619 CGLCGNF 1625>NP_775871 Length = 8384 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 5/7 (71%) Query: 3 CGMAANF 9 CG+ NF Sbjct: 603 CGLCGNF 609>XP_006725823 Length = 1825 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 5/7 (71%) Query: 3 CGMAANF 9 CG+ NF Sbjct: 173 CGLCGNF 179Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 5/7 (71%) Query: 3 CGMAANF 9 CG+ NF Sbjct: 999 CGLCGNF 1005>XP_006725595 Length = 1311 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 5/7 (71%) Query: 3 CGMAANF 9 CG+ NF Sbjct: 173 CGLCGNF 179Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 5/7 (71%) Query: 3 CGMAANF 9 CG+ NF Sbjct: 999 CGLCGNF 1005>XP_006720458 Length = 297 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 QCGMAAN 8 +C MAAN Sbjct: 59 RCSMAAN 65>XP_006720457 Length = 297 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 QCGMAAN 8 +C MAAN Sbjct: 59 RCSMAAN 65>XP_005271710 Length = 2150 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 5/7 (71%) Query: 3 CGMAANF 9 CG+ NF Sbjct: 1619 CGLCGNF 1625>XP_006718462 Length = 4966 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 5/7 (71%) Query: 3 CGMAANF 9 CG+ NF Sbjct: 568 CGLCGNF 574Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 5/7 (71%) Query: 3 CGMAANF 9 CG+ NF Sbjct: 1033 CGLCGNF 1039>XP_006710008 Length = 2014 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 5/7 (71%) Query: 3 CGMAANF 9 CG+ NF Sbjct: 568 CGLCGNF 574Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 5/7 (71%) Query: 3 CGMAANF 9 CG+ NF Sbjct: 1033 CGLCGNF 1039>NP_001129386 Length = 1503 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 5/7 (71%) Query: 3 CGMAANF 9 CG+ NF Sbjct: 1279 CGLCGNF 1285>NP_705690 Length = 507 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 CGMAA 7 CGMAA Sbjct: 165 CGMAA 169>NP_036221 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 CGMAAN 8 CG AAN Sbjct: 224 CGAAAN 229>NP_001171515 Length = 668 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 1 AQCGMAAN 8 A CGM N Sbjct: 73 AYCGMGEN 80>NP_079533 Length = 710 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 1 AQCGMAAN 8 A CGM N Sbjct: 73 AYCGMGEN 80>NP_001258740 Length = 68 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 QCGMAANF 9 QCG A+F Sbjct: 28 QCGPPASF 35>NP_004255 Length = 144 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 QCGMAANF 9 QCG A+F Sbjct: 28 QCGPPASF 35>NP_919417 Length = 484 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 CGMAA 7 CGMAA Sbjct: 165 CGMAA 169>NP_001103467 Length = 533 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AQCGMAAN 8 A+C +AAN Sbjct: 140 ARCWLAAN 147>XP_005256254 Length = 1837 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 CGMAAN 8 CG++AN Sbjct: 1219 CGLSAN 1224>XP_005267404 Length = 797 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AQCGMAAN 8 A+C +AAN Sbjct: 404 ARCWLAAN 411>XP_006711818 Length = 559 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 CGMAAN 8 CG AAN Sbjct: 45 CGAAAN 50>XP_006711817 Length = 559 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 CGMAAN 8 CG AAN Sbjct: 45 CGAAAN 50Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.332 0.127 0.432 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 536,918 Number of extensions: 592 Number of successful extensions: 57 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 57 Number of HSP's successfully gapped: 57 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |