Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001264326 17 2528 NP_001138486 17 2528 NP_878914 17 3301 NP_878918 17 3301 NP_056516 17 3301 NP_001120869 17 3301 NP_001120870 17 3301 XP_005267516 17 3301 XP_005267513 17 3301 NP_065746 17 4312 XP_005259656 17 4312 NP_056323 16 5631 NP_114122 16 5631 NP_001188395 16 5631 NP_001171646 16 5631 NP_001137310 16 5631 NP_808218 16 5631 NP_055947 16 5631 NP_001271439 16 5631 NP_001271438 16 5631 NP_001171647 16 5631 XP_006721567 16 5631 XP_005249729 16 5631 XP_006714567 16 5631 XP_006714566 16 5631 XP_005248043 16 5631 XP_006713958 16 5631 NP_065824 16 5631 NP_001106832 16 5631 NP_057402 16 7355 NP_942015 16 7355 NP_777361 16 7355 NP_733783 16 7355 NP_001269093 16 7355 NP_036358 16 7355 NP_777362 16 7355 NP_733782 16 7355 NP_001269094 16 7355 NP_002553 16 7355 NP_006463 16 7355 NP_055826 16 7355 NP_001185879 16 7355 NP_001004318 16 7355 NP_112196 16 7355 XP_005266213 16 7355 XP_005266212 16 7355 XP_005266211 16 7355 XP_005268810 16 7355 XP_005268809 16 7355 NP_036416 16 7355 NP_001020278 15 9605 NP_056655 15 9605 NP_056656 15 9605 NP_001102 15 9605 NP_001180424 15 9605 NP_644813 15 9605 XP_006711176 15 9605 XP_006711175 15 9605 XP_006711174 15 9605 XP_006711173 15 9605 XP_006711172 15 9605>NP_001264326 Length = 287 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PKFKFRAL 9 PK+K RAL Sbjct: 63 PKYKLRAL 70>NP_001138486 Length = 287 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PKFKFRAL 9 PK+K RAL Sbjct: 63 PKYKLRAL 70>NP_878914 Length = 429 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 APKFKFRAL 9 AP+ KFRA+ Sbjct: 341 APRAKFRAV 349>NP_878918 Length = 6907 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 APKFKFRAL 9 AP+ KFRA+ Sbjct: 6819 APRAKFRAV 6827>NP_056516 Length = 483 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 PKFKFRA 8 PK++FRA Sbjct: 247 PKYRFRA 253>NP_001120869 Length = 457 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 PKFKFRA 8 PK++FRA Sbjct: 247 PKYRFRA 253>NP_001120870 Length = 429 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 PKFKFRA 8 PK++FRA Sbjct: 247 PKYRFRA 253>XP_005267516 Length = 6884 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 APKFKFRAL 9 AP+ KFRA+ Sbjct: 6796 APRAKFRAV 6804>XP_005267513 Length = 6921 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 APKFKFRAL 9 AP+ KFRA+ Sbjct: 6833 APRAKFRAV 6841>NP_065746 Length = 1221 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 APKFKFRAL 9 APK K RAL Sbjct: 508 APKLKKRAL 516>XP_005259656 Length = 1373 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 APKFKFRAL 9 APK K RAL Sbjct: 508 APKLKKRAL 516>NP_056323 Length = 657 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 PKFKFRAL 9 P+FK+R L Sbjct: 486 PEFKYRIL 493>NP_114122 Length = 230 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PKFKFRAL 9 PK KF+AL Sbjct: 107 PKEKFKAL 114>NP_001188395 Length = 230 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PKFKFRAL 9 PK KF+AL Sbjct: 107 PKEKFKAL 114>NP_001171646 Length = 657 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 PKFKFRAL 9 P+FK+R L Sbjct: 486 PEFKYRIL 493>NP_001137310 Length = 522 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 PKFKFRA 8 PKF FR+ Sbjct: 375 PKFNFRS 381>NP_808218 Length = 568 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 PKFKFRA 8 PKF FR+ Sbjct: 375 PKFNFRS 381>NP_055947 Length = 957 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 PKFKFRAL 9 P++KFR L Sbjct: 921 PQYKFREL 928>NP_001271439 Length = 525 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 PKFKFRA 8 PKF FR+ Sbjct: 332 PKFNFRS 338>NP_001271438 Length = 551 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 PKFKFRA 8 PKF FR+ Sbjct: 358 PKFNFRS 364>NP_001171647 Length = 657 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 PKFKFRAL 9 P+FK+R L Sbjct: 486 PEFKYRIL 493>XP_006721567 Length = 531 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 PKFKFRA 8 PKF FR+ Sbjct: 338 PKFNFRS 344>XP_005249729 Length = 968 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 PKFKFRAL 9 P++KFR L Sbjct: 932 PQYKFREL 939>XP_006714567 Length = 257 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PKFKFRAL 9 PK KF+AL Sbjct: 107 PKEKFKAL 114>XP_006714566 Length = 257 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PKFKFRAL 9 PK KF+AL Sbjct: 107 PKEKFKAL 114>XP_005248043 Length = 669 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 PKFKFRAL 9 PK K RAL Sbjct: 48 PKLKLRAL 55>XP_006713958 Length = 693 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 PKFKFRAL 9 PK K RAL Sbjct: 48 PKLKLRAL 55>NP_065824 Length = 693 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 PKFKFRAL 9 PK K RAL Sbjct: 48 PKLKLRAL 55>NP_001106832 Length = 693 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 PKFKFRAL 9 PK K RAL Sbjct: 48 PKLKLRAL 55>NP_057402 Length = 447 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 PKFKFRAL 9 PK+ FR L Sbjct: 257 PKYSFRRL 264>NP_942015 Length = 504 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 APKFKFRAL 9 AP F+ RAL Sbjct: 82 APLFQLRAL 90>NP_777361 Length = 379 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 PKFKFRAL 9 PK+ FR L Sbjct: 189 PKYSFRRL 196>NP_733783 Length = 497 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 PKFKFRAL 9 PK+ FR L Sbjct: 281 PKYSFRRL 288>NP_001269093 Length = 370 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 PKFKFRAL 9 PK+ FR L Sbjct: 247 PKYSFRRL 254>NP_036358 Length = 399 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 PKFKFRAL 9 PK+ FR L Sbjct: 209 PKYSFRRL 216>NP_777362 Length = 404 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 PKFKFRAL 9 PK+ FR L Sbjct: 281 PKYSFRRL 288>NP_733782 Length = 471 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 PKFKFRAL 9 PK+ FR L Sbjct: 281 PKYSFRRL 288>NP_001269094 Length = 349 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 PKFKFRAL 9 PK+ FR L Sbjct: 281 PKYSFRRL 288>NP_002553 Length = 595 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 PKFKFRAL 9 PK+ FR L Sbjct: 271 PKYSFRRL 278>NP_006463 Length = 391 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 APKFKF 6 AP+FKF Sbjct: 367 APEFKF 372>NP_055826 Length = 1858 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 PKFKFR 7 P FKFR Sbjct: 961 PSFKFR 966>NP_001185879 Length = 1880 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 PKFKFR 7 P FKFR Sbjct: 983 PSFKFR 988>NP_001004318 Length = 438 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KFKFRAL 9 +F+FRAL Sbjct: 120 RFRFRAL 126>NP_112196 Length = 733 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 PKFKFRA 8 PK KFRA Sbjct: 125 PKEKFRA 131>XP_005266213 Length = 430 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 PKFKFRAL 9 PK+ FR L Sbjct: 281 PKYSFRRL 288>XP_005266212 Length = 488 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 PKFKFRAL 9 PK+ FR L Sbjct: 281 PKYSFRRL 288>XP_005266211 Length = 512 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 PKFKFRAL 9 PK+ FR L Sbjct: 281 PKYSFRRL 288>XP_005268810 Length = 1005 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 PKFKFR 7 PKF FR Sbjct: 759 PKFSFR 764>XP_005268809 Length = 1023 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 PKFKFR 7 PKF FR Sbjct: 777 PKFSFR 782>NP_036416 Length = 1083 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 PKFKFR 7 PKF FR Sbjct: 837 PKFSFR 842>NP_001020278 Length = 931 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 PKFKFRAL 9 P+FKF+ + Sbjct: 238 PRFKFQVV 245>NP_056655 Length = 1200 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 PKFKFRAL 9 P+FKF+ + Sbjct: 533 PRFKFQVV 540>NP_056656 Length = 1181 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 PKFKFRAL 9 P+FKF+ + Sbjct: 533 PRFKFQVV 540>NP_001102 Length = 1226 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 PKFKFRAL 9 P+FKF+ + Sbjct: 533 PRFKFQVV 540>NP_001180424 Length = 931 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 PKFKFRAL 9 P+FKF+ + Sbjct: 238 PRFKFQVV 245>NP_644813 Length = 537 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 PKFKFRAL 9 P+F FR L Sbjct: 140 PRFLFRGL 147>XP_006711176 Length = 931 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 PKFKFRAL 9 P+FKF+ + Sbjct: 238 PRFKFQVV 245>XP_006711175 Length = 931 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 PKFKFRAL 9 P+FKF+ + Sbjct: 238 PRFKFQVV 245>XP_006711174 Length = 931 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 PKFKFRAL 9 P+FKF+ + Sbjct: 238 PRFKFQVV 245>XP_006711173 Length = 1210 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 PKFKFRAL 9 P+FKF+ + Sbjct: 543 PRFKFQVV 550>XP_006711172 Length = 1236 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 PKFKFRAL 9 P+FKF+ + Sbjct: 543 PRFKFQVV 550Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.340 0.147 0.453 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 545,898 Number of extensions: 1195 Number of successful extensions: 61 Number of sequences better than 10000.0: 61 Number of HSP's gapped: 61 Number of HSP's successfully gapped: 61 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |