Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_733751                                                              19     665
XP_006716142                                                           19     665
XP_005250088                                                           19     665
XP_006716141                                                           19     665
XP_005250085                                                           19     665
XP_006716140                                                           19     665
XP_005250084                                                           19     665
XP_005250083                                                           19     665
XP_005250082                                                           19     665
NP_000912                                                              17    3301
XP_006719149                                                           17    3301
NP_060050                                                              17    4312
NP_055626                                                              17    4312
NP_149977                                                              17    4312
XP_006724490                                                           17    4312
XP_006724489                                                           17    4312
XP_005262012                                                           17    4312
XP_006718598                                                           17    4312
XP_005274036                                                           17    4312
XP_005274035                                                           17    4312
XP_005269983                                                           17    4312
XP_005269982                                                           17    4312
XP_006717970                                                           17    4312
XP_006717405                                                           17    4312
XP_006717404                                                           17    4312
XP_006717403                                                           17    4312
XP_005263469                                                           17    4312
XP_005263468                                                           17    4312
NP_079147                                                              17    4312
NP_001273511                                                           16    5631
NP_001273512                                                           16    5631
NP_001273510                                                           16    5631
NP_065952                                                              16    5631
NP_001166169                                                           16    5631
NP_060263                                                              16    5631
NP_573570                                                              16    5631
NP_001166170                                                           16    5631
NP_612429                                                              16    5631
XP_006725204                                                           16    5631
XP_006725203                                                           16    5631
XP_005267356                                                           16    5631
XP_005253084                                                           16    5631
XP_005253082                                                           16    5631
XP_005268429                                                           16    5631
NP_056040                                                              16    7355
NP_001054                                                              16    7355
NP_036608                                                              16    7355
NP_115878                                                              16    7355
NP_003103                                                              16    7355
XP_005251811                                                           16    7355
XP_005251810                                                           16    7355
XP_005251809                                                           16    7355
XP_005251808                                                           16    7355
XP_005251807                                                           16    7355
XP_005251805                                                           16    7355
XP_005251803                                                           16    7355
XP_006717050                                                           16    7355
XP_005251802                                                           16    7355
XP_006717049                                                           16    7355
XP_006717048                                                           16    7355
XP_006717047                                                           16    7355
XP_006717046                                                           16    7355
XP_006717045                                                           16    7355
XP_005249886                                                           16    7355
XP_005249885                                                           16    7355
XP_006714108                                                           16    7355
XP_005265813                                                           16    7355
XP_005265812                                                           16    7355
XP_005265811                                                           16    7355
XP_006714107                                                           16    7355
XP_005265809                                                           16    7355
XP_006712045                                                           16    7355
NP_065773                                                              16    7355
NP_000079                                                              15    9605
NP_003847                                                              15    9605
NP_057316                                                              15    9605
NP_001278253                                                           15    9605
NP_001139480                                                           15    9605
NP_112220                                                              15    9605
NP_001139481                                                           15    9605
NP_005240                                                              15    9605
NP_689982                                                              15    9605
NP_006827                                                              15    9605
NP_061938                                                              15    9605
NP_001157877                                                           15    9605
NP_005180                                                              15    9605
XP_005276497                                                           15    9605
XP_006726470                                                           15    9605
XP_005259752                                                           15    9605
XP_006722779                                                           15    9605
XP_006722778                                                           15    9605
XP_005259585                                                           15    9605
XP_006722777                                                           15    9605
XP_006722203                                                           15    9605
XP_006722053                                                           15    9605
XP_006722052                                                           15    9605
XP_006721766                                                           15    9605
XP_005257115                                                           15    9605
XP_005266674                                                           15    9605
XP_005251370                                                           15    9605
XP_006713517                                                           15    9605
XP_006712902                                                           15    9605
XP_005275789                                                           15    9605
XP_006710213                                                           15    9605
NP_612206                                                              15    9605
>NP_733751
          Length = 4911

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    APAAKRDSG 9
            APAAK DSG
Sbjct: 3765 APAAKGDSG 3773
>XP_006716142
          Length = 4927

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    APAAKRDSG 9
            APAAK DSG
Sbjct: 3782 APAAKGDSG 3790
>XP_005250088
          Length = 4928

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    APAAKRDSG 9
            APAAK DSG
Sbjct: 3782 APAAKGDSG 3790
>XP_006716141
          Length = 4959

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    APAAKRDSG 9
            APAAK DSG
Sbjct: 3782 APAAKGDSG 3790
>XP_005250085
          Length = 4979

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    APAAKRDSG 9
            APAAK DSG
Sbjct: 3782 APAAKGDSG 3790
>XP_006716140
          Length = 4982

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    APAAKRDSG 9
            APAAK DSG
Sbjct: 3782 APAAKGDSG 3790
>XP_005250084
          Length = 4982

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    APAAKRDSG 9
            APAAK DSG
Sbjct: 3782 APAAKGDSG 3790
>XP_005250083
          Length = 4982

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    APAAKRDSG 9
            APAAK DSG
Sbjct: 3781 APAAKGDSG 3789
>XP_005250082
          Length = 4983

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    APAAKRDSG 9
            APAAK DSG
Sbjct: 3782 APAAKGDSG 3790
>NP_000912
          Length = 1141

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2  PAAKRDSG 9
          PA+ RDSG
Sbjct: 35 PASPRDSG 42
>XP_006719149
          Length = 1087

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2  PAAKRDSG 9
          PA+ RDSG
Sbjct: 35 PASPRDSG 42
>NP_060050
          Length = 708

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   PAAKRDS 8
           PA KRDS
Sbjct: 218 PATKRDS 224
>NP_055626
          Length = 1209

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1    APAAKRDSG 9
            +P A+RD+G
Sbjct: 1010 SPGAERDAG 1018
>NP_149977
          Length = 707

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   PAAKRDSG 9
           PA+++DSG
Sbjct: 676 PASQKDSG 683
>XP_006724490
          Length = 652

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   PAAKRDSG 9
           PA+++DSG
Sbjct: 621 PASQKDSG 628
>XP_006724489
          Length = 652

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   PAAKRDSG 9
           PA+++DSG
Sbjct: 621 PASQKDSG 628
>XP_005262012
          Length = 682

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   PAAKRDSG 9
           PA+++DSG
Sbjct: 651 PASQKDSG 658
>XP_006718598
          Length = 1206

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   APAAKRD 7
           APAA+RD
Sbjct: 168 APAAERD 174
>XP_005274036
          Length = 1280

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   APAAKRD 7
           APAA+RD
Sbjct: 168 APAAERD 174
>XP_005274035
          Length = 1280

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   APAAKRD 7
           APAA+RD
Sbjct: 168 APAAERD 174
>XP_005269983
          Length = 708

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   PAAKRDS 8
           PA KRDS
Sbjct: 218 PATKRDS 224
>XP_005269982
          Length = 734

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   PAAKRDS 8
           PA KRDS
Sbjct: 244 PATKRDS 250
>XP_006717970
          Length = 734

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   PAAKRDS 8
           PA KRDS
Sbjct: 244 PATKRDS 250
>XP_006717405
          Length = 1209

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1    APAAKRDSG 9
            +P A+RD+G
Sbjct: 1010 SPGAERDAG 1018
>XP_006717404
          Length = 1209

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1    APAAKRDSG 9
            +P A+RD+G
Sbjct: 1010 SPGAERDAG 1018
>XP_006717403
          Length = 1209

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1    APAAKRDSG 9
            +P A+RD+G
Sbjct: 1010 SPGAERDAG 1018
>XP_005263469
          Length = 1209

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1    APAAKRDSG 9
            +P A+RD+G
Sbjct: 1010 SPGAERDAG 1018
>XP_005263468
          Length = 1209

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1    APAAKRDSG 9
            +P A+RD+G
Sbjct: 1010 SPGAERDAG 1018
>NP_079147
          Length = 199

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2  PAAKRDSG 9
          PA  RDSG
Sbjct: 54 PAGARDSG 61
>NP_001273511
          Length = 1647

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1    APAAKRDS 8
            APA K DS
Sbjct: 1362 APAGKEDS 1369
>NP_001273512
          Length = 1645

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1    APAAKRDS 8
            APA K DS
Sbjct: 1360 APAGKEDS 1367
>NP_001273510
          Length = 1649

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1    APAAKRDS 8
            APA K DS
Sbjct: 1364 APAGKEDS 1371
>NP_065952
          Length = 1648

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1    APAAKRDS 8
            APA K DS
Sbjct: 1363 APAGKEDS 1370
>NP_001166169
          Length = 984

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   APAAKRDS 8
           APA+ RDS
Sbjct: 221 APASPRDS 228
>NP_060263
          Length = 199

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   APAAKRDSG 9
           APA+KR  G
Sbjct: 166 APASKRSLG 174
>NP_573570
          Length = 1023

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   APAAKRDS 8
           APA+ RDS
Sbjct: 260 APASPRDS 267
>NP_001166170
          Length = 959

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   APAAKRDS 8
           APA+ RDS
Sbjct: 196 APASPRDS 203
>NP_612429
          Length = 5795

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1    APAAKRDSG 9
            AP AK D G
Sbjct: 1465 APGAKLDGG 1473
>XP_006725204
          Length = 1646

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1    APAAKRDS 8
            APA K DS
Sbjct: 1361 APAGKEDS 1368
>XP_006725203
          Length = 1648

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1    APAAKRDS 8
            APA K DS
Sbjct: 1363 APAGKEDS 1370
>XP_005267356
          Length = 5695

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1    APAAKRDSG 9
            AP AK D G
Sbjct: 1365 APGAKLDGG 1373
>XP_005253084
          Length = 1646

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1    APAAKRDS 8
            APA K DS
Sbjct: 1361 APAGKEDS 1368
>XP_005253082
          Length = 1648

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1    APAAKRDS 8
            APA K DS
Sbjct: 1363 APAGKEDS 1370
>XP_005268429
          Length = 1002

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   APAAKRDS 8
           APA+ RDS
Sbjct: 239 APASPRDS 246
>NP_056040
          Length = 3088

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2    PAAKRDSG 9
            P A +DSG
Sbjct: 2854 PTANKDSG 2861
>NP_001054
          Length = 698

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   APAAKRDS 8
           AP +K+DS
Sbjct: 504 APGSKKDS 511
>NP_036608
          Length = 290

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1  APAAKRDSG 9
          +PA  R+SG
Sbjct: 53 SPAGSRESG 61
>NP_115878
          Length = 543

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1  APAAKRDS 8
          APAA +DS
Sbjct: 21 APAAAQDS 28
>NP_003103
          Length = 784

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2   PAAKRDSG 9
           PAA  DSG
Sbjct: 286 PAATADSG 293
>XP_005251811
          Length = 3060

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2    PAAKRDSG 9
            P A +DSG
Sbjct: 2855 PTANKDSG 2862
>XP_005251810
          Length = 3062

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2    PAAKRDSG 9
            P A +DSG
Sbjct: 2854 PTANKDSG 2861
>XP_005251809
          Length = 3063

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2    PAAKRDSG 9
            P A +DSG
Sbjct: 2855 PTANKDSG 2862
>XP_005251808
          Length = 3075

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2    PAAKRDSG 9
            P A +DSG
Sbjct: 2855 PTANKDSG 2862
>XP_005251807
          Length = 3088

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2    PAAKRDSG 9
            P A +DSG
Sbjct: 2855 PTANKDSG 2862
>XP_005251805
          Length = 3090

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2    PAAKRDSG 9
            P A +DSG
Sbjct: 2854 PTANKDSG 2861
>XP_005251803
          Length = 3091

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2    PAAKRDSG 9
            P A +DSG
Sbjct: 2855 PTANKDSG 2862
>XP_006717050
          Length = 3092

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2    PAAKRDSG 9
            P A +DSG
Sbjct: 2855 PTANKDSG 2862
>XP_005251802
          Length = 3092

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2    PAAKRDSG 9
            P A +DSG
Sbjct: 2855 PTANKDSG 2862
>XP_006717049
          Length = 3100

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2    PAAKRDSG 9
            P A +DSG
Sbjct: 2854 PTANKDSG 2861
>XP_006717048
          Length = 3101

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2    PAAKRDSG 9
            P A +DSG
Sbjct: 2855 PTANKDSG 2862
>XP_006717047
          Length = 3101

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2    PAAKRDSG 9
            P A +DSG
Sbjct: 2855 PTANKDSG 2862
>XP_006717046
          Length = 3103

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2    PAAKRDSG 9
            P A +DSG
Sbjct: 2854 PTANKDSG 2861
>XP_006717045
          Length = 3104

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2    PAAKRDSG 9
            P A +DSG
Sbjct: 2855 PTANKDSG 2862
>XP_005249886
          Length = 706

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2   PAAKRDSG 9
           PAA  DSG
Sbjct: 286 PAATADSG 293
>XP_005249885
          Length = 767

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2   PAAKRDSG 9
           PAA  DSG
Sbjct: 269 PAATADSG 276
>XP_006714108
          Length = 1119

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   APAAKRDS 8
           AP+ +RDS
Sbjct: 799 APSTRRDS 806
>XP_005265813
          Length = 1143

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   APAAKRDS 8
           AP+ +RDS
Sbjct: 823 APSTRRDS 830
>XP_005265812
          Length = 1151

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   APAAKRDS 8
           AP+ +RDS
Sbjct: 831 APSTRRDS 838
>XP_005265811
          Length = 1175

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   APAAKRDS 8
           AP+ +RDS
Sbjct: 855 APSTRRDS 862
>XP_006714107
          Length = 1233

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   APAAKRDS 8
           AP+ +RDS
Sbjct: 913 APSTRRDS 920
>XP_005265809
          Length = 1233

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   APAAKRDS 8
           AP+ +RDS
Sbjct: 913 APSTRRDS 920
>XP_006712045
          Length = 150

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1  APAAKRDSG 9
          +PA  R+SG
Sbjct: 53 SPAGSRESG 61
>NP_065773
          Length = 1233

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   APAAKRDS 8
           AP+ +RDS
Sbjct: 913 APSTRRDS 920
>NP_000079
          Length = 1464

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   APAAKRDSG 9
           AP +K D+G
Sbjct: 438 APGSKGDTG 446
>NP_003847
          Length = 328

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2  PAAKRDSG 9
          PAA  DSG
Sbjct: 76 PAAVADSG 83
>NP_057316
          Length = 556

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2  PAAKRDSG 9
          PAA  DSG
Sbjct: 76 PAAVADSG 83
>NP_001278253
          Length = 2639

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   PAAKRDSG 9
           PAA+ D G
Sbjct: 239 PAAEEDGG 246
>NP_001139480
          Length = 687

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   PAAKRDSG 9
           PA  +DSG
Sbjct: 249 PACPKDSG 256
>NP_112220
          Length = 848

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   PAAKRDSG 9
           PA  +DSG
Sbjct: 249 PACPKDSG 256
>NP_001139481
          Length = 793

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   PAAKRDSG 9
           PA  +DSG
Sbjct: 249 PACPKDSG 256
>NP_005240
          Length = 489

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1  APAAKRDSG 9
          APAA  D G
Sbjct: 90 APAADDDKG 98
>NP_689982
          Length = 453

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   APAAKRDSG 9
           +P+A  DSG
Sbjct: 244 SPSASSDSG 252
>NP_006827
          Length = 2671

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2    PAAKRDSG 9
            PA K D+G
Sbjct: 1368 PAIKEDAG 1375
>NP_061938
          Length = 386

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1  APAAKRDSG 9
          APAA  D G
Sbjct: 46 APAAPADPG 54
>NP_001157877
          Length = 235

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   PAAKRDSG 9
           PAA+ D+G
Sbjct: 139 PAARGDTG 146
>NP_005180
          Length = 532

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   PAAKRD 7
           PA+KRD
Sbjct: 424 PASKRD 429
>XP_005276497
          Length = 217

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   APAAKRDS 8
           +P A+RDS
Sbjct: 145 SPCAERDS 152
>XP_006726470
          Length = 191

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3  AAKRDSG 9
          AAK DSG
Sbjct: 30 AAKTDSG 36
>XP_005259752
          Length = 230

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   PAAKRDS 8
           PAA+RD+
Sbjct: 175 PAAERDT 181
>XP_006722779
          Length = 335

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   APAAKRDSG 9
           +P+A  DSG
Sbjct: 290 SPSASSDSG 298
>XP_006722778
          Length = 499

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   APAAKRDSG 9
           +P+A  DSG
Sbjct: 290 SPSASSDSG 298
>XP_005259585
          Length = 705

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   APAAKRDSG 9
           +P+A  DSG
Sbjct: 244 SPSASSDSG 252
>XP_006722777
          Length = 751

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   APAAKRDSG 9
           +P+A  DSG
Sbjct: 290 SPSASSDSG 298
>XP_006722203
          Length = 447

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   PAAKRD 7
           PA+KRD
Sbjct: 339 PASKRD 344
>XP_006722053
          Length = 2608

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   PAAKRDSG 9
           PAA+ D G
Sbjct: 239 PAAEEDGG 246
>XP_006722052
          Length = 2631

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   PAAKRDSG 9
           PAA+ D G
Sbjct: 239 PAAEEDGG 246
>XP_006721766
          Length = 1020

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   APAAKRDSG 9
           AP +K D+G
Sbjct: 438 APGSKGDTG 446
>XP_005257115
          Length = 1374

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   APAAKRDSG 9
           AP +K D+G
Sbjct: 438 APGSKGDTG 446
>XP_005266674
          Length = 217

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   APAAKRDS 8
           +P A+RDS
Sbjct: 145 SPCAERDS 152
>XP_005251370
          Length = 793

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   PAAKRDSG 9
           PA  +DSG
Sbjct: 249 PACPKDSG 256
>XP_006713517
          Length = 178

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3  AAKRDSG 9
          AAK DSG
Sbjct: 17 AAKTDSG 23
>XP_006712902
          Length = 556

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2  PAAKRDSG 9
          PAA  DSG
Sbjct: 76 PAAVADSG 83
>XP_005275789
          Length = 209

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   APAAKRDS 8
           +P A+RDS
Sbjct: 137 SPCAERDS 144
>XP_006710213
          Length = 191

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3  AAKRDSG 9
          AAK DSG
Sbjct: 30 AAKTDSG 36
>NP_612206
          Length = 287

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1  APAAKRDS 8
          AP+A+R+S
Sbjct: 55 APSARRNS 62
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.302    0.118    0.326 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 699,837
Number of extensions: 1736
Number of successful extensions: 105
Number of sequences better than 10000.0: 105
Number of HSP's gapped: 105
Number of HSP's successfully gapped: 105
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.3 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package