Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_056106 17 4312 NP_789786 17 4312 XP_005276826 17 4312 XP_005276825 17 4312 XP_005276824 17 4312 XP_005276823 17 4312 XP_005276822 17 4312 XP_006726278 17 4312 XP_005276821 17 4312 XP_006726277 17 4312 XP_005276820 17 4312 XP_005276819 17 4312 XP_005276818 17 4312 XP_005248522 17 4312 XP_005248521 17 4312 XP_005248520 17 4312 XP_005248519 17 4312 XP_005248518 17 4312 XP_006714633 17 4312 XP_005248517 17 4312 XP_006714632 17 4312 XP_005248516 17 4312 XP_005248515 17 4312 XP_005248514 17 4312 NP_001278383 16 5631 NP_055676 16 5631 NP_001273456 16 5631 XP_006721418 16 5631 NP_598397 16 7355 NP_004728 16 7355 XP_006724438 16 7355 XP_005261889 16 7355 XP_005261888 16 7355 NP_001268421 15 9605 NP_000170 15 9605 NP_733468 15 9605 NP_653091 15 9605 NP_001268422 15 9605 NP_001268423 15 9605 NP_055362 15 9605 XP_006720542 15 9605 XP_005264328 15 9605>NP_056106 Length = 782 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 NAVVKKNL 9 NAVV++NL Sbjct: 231 NAVVRENL 238>NP_789786 Length = 511 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 NAVVKKNL 9 NAV+K+NL Sbjct: 211 NAVLKENL 218>XP_005276826 Length = 348 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 NAVVKKNL 9 NAV+K+NL Sbjct: 210 NAVLKENL 217>XP_005276825 Length = 349 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 NAVVKKNL 9 NAV+K+NL Sbjct: 211 NAVLKENL 218>XP_005276824 Length = 386 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 NAVVKKNL 9 NAV+K+NL Sbjct: 86 NAVLKENL 93>XP_005276823 Length = 386 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 NAVVKKNL 9 NAV+K+NL Sbjct: 86 NAVLKENL 93>XP_005276822 Length = 421 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 NAVVKKNL 9 NAV+K+NL Sbjct: 121 NAVLKENL 128>XP_006726278 Length = 434 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 NAVVKKNL 9 NAV+K+NL Sbjct: 134 NAVLKENL 141>XP_005276821 Length = 438 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 NAVVKKNL 9 NAV+K+NL Sbjct: 138 NAVLKENL 145>XP_006726277 Length = 506 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 NAVVKKNL 9 NAV+K+NL Sbjct: 211 NAVLKENL 218>XP_005276820 Length = 510 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 NAVVKKNL 9 NAV+K+NL Sbjct: 210 NAVLKENL 217>XP_005276819 Length = 511 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 NAVVKKNL 9 NAV+K+NL Sbjct: 211 NAVLKENL 218>XP_005276818 Length = 511 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 NAVVKKNL 9 NAV+K+NL Sbjct: 211 NAVLKENL 218>XP_005248522 Length = 348 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 NAVVKKNL 9 NAV+K+NL Sbjct: 210 NAVLKENL 217>XP_005248521 Length = 349 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 NAVVKKNL 9 NAV+K+NL Sbjct: 211 NAVLKENL 218>XP_005248520 Length = 386 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 NAVVKKNL 9 NAV+K+NL Sbjct: 86 NAVLKENL 93>XP_005248519 Length = 386 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 NAVVKKNL 9 NAV+K+NL Sbjct: 86 NAVLKENL 93>XP_005248518 Length = 421 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 NAVVKKNL 9 NAV+K+NL Sbjct: 121 NAVLKENL 128>XP_006714633 Length = 434 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 NAVVKKNL 9 NAV+K+NL Sbjct: 134 NAVLKENL 141>XP_005248517 Length = 438 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 NAVVKKNL 9 NAV+K+NL Sbjct: 138 NAVLKENL 145>XP_006714632 Length = 506 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 NAVVKKNL 9 NAV+K+NL Sbjct: 211 NAVLKENL 218>XP_005248516 Length = 510 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 NAVVKKNL 9 NAV+K+NL Sbjct: 210 NAVLKENL 217>XP_005248515 Length = 511 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 NAVVKKNL 9 NAV+K+NL Sbjct: 211 NAVLKENL 218>XP_005248514 Length = 511 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 NAVVKKNL 9 NAV+K+NL Sbjct: 211 NAVLKENL 218>NP_001278383 Length = 795 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NAVVKKN 8 NAV++KN Sbjct: 293 NAVIRKN 299>NP_055676 Length = 946 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NAVVKKN 8 NAV++KN Sbjct: 444 NAVIRKN 450>NP_001273456 Length = 975 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NAVVKKN 8 NAV++KN Sbjct: 444 NAVIRKN 450>XP_006721418 Length = 972 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NAVVKKN 8 NAV++KN Sbjct: 444 NAVIRKN 450>NP_598397 Length = 756 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NAVVKKN 8 NAV+K+N Sbjct: 339 NAVIKQN 345>NP_004728 Length = 756 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NAVVKKN 8 NAV+K+N Sbjct: 339 NAVIKQN 345>XP_006724438 Length = 577 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NAVVKKN 8 NAV+K+N Sbjct: 339 NAVIKQN 345>XP_005261889 Length = 756 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NAVVKKN 8 NAV+K+N Sbjct: 339 NAVIKQN 345>XP_005261888 Length = 756 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NAVVKKN 8 NAV+K+N Sbjct: 339 NAVIKQN 345>NP_001268421 Length = 1230 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ANAVVKK 7 ANAVVK+ Sbjct: 1098 ANAVVKE 1104>NP_000170 Length = 1360 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ANAVVKK 7 ANAVVK+ Sbjct: 1228 ANAVVKE 1234>NP_733468 Length = 2342 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ANAVVKKNL 9 AN+V+ KNL Sbjct: 1832 ANSVLIKNL 1840>NP_653091 Length = 2316 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ANAVVKKNL 9 AN+V+ KNL Sbjct: 1806 ANSVLIKNL 1814>NP_001268422 Length = 1058 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ANAVVKK 7 ANAVVK+ Sbjct: 926 ANAVVKE 932>NP_001268423 Length = 1058 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ANAVVKK 7 ANAVVK+ Sbjct: 926 ANAVVKE 932>NP_055362 Length = 352 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 ANAVVKKN 8 ANA+ K N Sbjct: 332 ANAITKNN 339>XP_006720542 Length = 352 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 ANAVVKKN 8 ANA+ K N Sbjct: 332 ANAITKNN 339>XP_005264328 Length = 1261 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ANAVVKK 7 ANAVVK+ Sbjct: 1129 ANAVVKE 1135Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.307 0.118 0.284 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 349,080 Number of extensions: 348 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |