Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001185761 18 1135 NP_001185763 18 1135 NP_055459 18 1135 NP_001002811 18 1135 NP_001002812 18 1135 XP_006711719 18 1135 XP_006711717 18 1135 XP_006711716 18 1135 XP_006711715 18 1135 XP_006711714 18 1135 XP_006711713 18 1135 XP_006711712 18 1135 XP_006711711 18 1135 XP_006711710 18 1135 XP_006711709 18 1135 XP_005277503 18 1135 XP_005273038 18 1135 XP_006711708 18 1135 XP_005277500 18 1135 XP_006711707 18 1135 XP_005277499 18 1135 XP_006711706 18 1135 XP_006711705 18 1135 NP_036423 17 3301 XP_006719768 17 3301 NP_001273763 17 4312 NP_002927 17 4312 NP_001273766 17 4312 NP_056240 16 5631 XP_006712046 16 5631 NP_002408 16 7355 NP_001139438 16 7355 NP_006382 16 7355 NP_001099038 16 7355 NP_001099037 16 7355 NP_001099036 16 7355 NP_071396 16 7355 NP_003651 16 7355 XP_006726477 16 7355 XP_006726476 16 7355 XP_003960392 16 7355 XP_006723513 16 7355 XP_006717927 16 7355 XP_006715230 16 7355 XP_006715229 16 7355 XP_005249350 16 7355 XP_005249349 16 7355 XP_005249348 16 7355 XP_005249347 16 7355 XP_005249346 16 7355 XP_006714494 16 7355 XP_006714493 16 7355 XP_373030 16 7355 XP_006710222 16 7355 XP_006710221 16 7355 XP_001717475 16 7355 NP_001269557 15 9605 NP_001269560 15 9605 NP_000038 15 9605 NP_057726 15 9605 XP_005274578 15 9605 XP_005274576 15 9605 XP_005274575 15 9605 XP_005254495 15 9605>NP_001185761 Length = 2240 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMERLTQAV 9 AMERLTQ V Sbjct: 892 AMERLTQEV 900>NP_001185763 Length = 2362 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMERLTQAV 9 AMERLTQ V Sbjct: 826 AMERLTQEV 834>NP_055459 Length = 2346 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMERLTQAV 9 AMERLTQ V Sbjct: 826 AMERLTQEV 834>NP_001002811 Length = 1132 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMERLTQAV 9 AMERLTQ V Sbjct: 989 AMERLTQEV 997>NP_001002812 Length = 969 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMERLTQAV 9 AMERLTQ V Sbjct: 826 AMERLTQEV 834>XP_006711719 Length = 2302 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMERLTQAV 9 AMERLTQ V Sbjct: 892 AMERLTQEV 900>XP_006711717 Length = 2385 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMERLTQAV 9 AMERLTQ V Sbjct: 892 AMERLTQEV 900>XP_006711716 Length = 2411 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMERLTQAV 9 AMERLTQ V Sbjct: 892 AMERLTQEV 900>XP_006711715 Length = 2428 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMERLTQAV 9 AMERLTQ V Sbjct: 826 AMERLTQEV 834>XP_006711714 Length = 2429 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMERLTQAV 9 AMERLTQ V Sbjct: 826 AMERLTQEV 834>XP_006711713 Length = 2432 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMERLTQAV 9 AMERLTQ V Sbjct: 829 AMERLTQEV 837>XP_006711712 Length = 2473 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMERLTQAV 9 AMERLTQ V Sbjct: 989 AMERLTQEV 997>XP_006711711 Length = 2482 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMERLTQAV 9 AMERLTQ V Sbjct: 989 AMERLTQEV 997>XP_006711710 Length = 2494 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMERLTQAV 9 AMERLTQ V Sbjct: 892 AMERLTQEV 900>XP_006711709 Length = 2495 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMERLTQAV 9 AMERLTQ V Sbjct: 892 AMERLTQEV 900>XP_005277503 Length = 2498 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMERLTQAV 9 AMERLTQ V Sbjct: 989 AMERLTQEV 997>XP_005273038 Length = 2509 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMERLTQAV 9 AMERLTQ V Sbjct: 989 AMERLTQEV 997>XP_006711708 Length = 2512 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMERLTQAV 9 AMERLTQ V Sbjct: 989 AMERLTQEV 997>XP_005277500 Length = 2525 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMERLTQAV 9 AMERLTQ V Sbjct: 989 AMERLTQEV 997>XP_006711707 Length = 2553 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMERLTQAV 9 AMERLTQ V Sbjct: 989 AMERLTQEV 997>XP_005277499 Length = 2561 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMERLTQAV 9 AMERLTQ V Sbjct: 989 AMERLTQEV 997>XP_006711706 Length = 2591 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMERLTQAV 9 AMERLTQ V Sbjct: 989 AMERLTQEV 997>XP_006711705 Length = 2592 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMERLTQAV 9 AMERLTQ V Sbjct: 989 AMERLTQEV 997>NP_036423 Length = 2120 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AMERLTQAV 9 A ERLTQA+ Sbjct: 1194 AAERLTQAL 1202>XP_006719768 Length = 2120 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AMERLTQAV 9 A ERLTQA+ Sbjct: 1194 AAERLTQAL 1202>NP_001273763 Length = 260 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AMERLTQAV 9 A+ERLTQ + Sbjct: 220 ALERLTQGM 228>NP_002927 Length = 286 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AMERLTQAV 9 A+ERLTQ + Sbjct: 246 ALERLTQGM 254>NP_001273766 Length = 169 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AMERLTQAV 9 A+ERLTQ + Sbjct: 129 ALERLTQGM 137>NP_056240 Length = 1720 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 AMERLTQAV 9 AMER QAV Sbjct: 1497 AMERRVQAV 1505>XP_006712046 Length = 1612 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 AMERLTQAV 9 AMER QAV Sbjct: 1389 AMERRVQAV 1397>NP_002408 Length = 3256 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AMERLTQ 7 A+ERLTQ Sbjct: 2618 AVERLTQ 2624>NP_001139438 Length = 2896 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AMERLTQ 7 A+ERLTQ Sbjct: 2258 AVERLTQ 2264>NP_006382 Length = 1038 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AMERLTQAV 9 A+ERLT+ V Sbjct: 765 ALERLTREV 773>NP_001099038 Length = 1749 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AMERLTQAV 9 ++ERL QAV Sbjct: 1345 SLERLRQAV 1353>NP_001099037 Length = 1757 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AMERLTQAV 9 ++ERL QAV Sbjct: 1345 SLERLRQAV 1353>NP_001099036 Length = 1770 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AMERLTQAV 9 ++ERL QAV Sbjct: 1358 SLERLRQAV 1366>NP_071396 Length = 1805 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AMERLTQAV 9 ++ERL QAV Sbjct: 1358 SLERLRQAV 1366>NP_003651 Length = 1194 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MERLTQAV 9 +ER+TQA+ Sbjct: 724 LERMTQAL 731>XP_006726477 Length = 1793 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AMERLTQAV 9 A+E+LT AV Sbjct: 1253 ALEKLTAAV 1261>XP_006726476 Length = 1793 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AMERLTQAV 9 A+E+LT AV Sbjct: 1253 ALEKLTAAV 1261>XP_003960392 Length = 1826 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AMERLTQAV 9 A+E+LT AV Sbjct: 1286 ALEKLTAAV 1294>XP_006723513 Length = 1185 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MERLTQAV 9 +ER+TQA+ Sbjct: 724 LERMTQAL 731>XP_006717927 Length = 2406 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AMERLTQ 7 A+ERLTQ Sbjct: 1768 AVERLTQ 1774>XP_006715230 Length = 1734 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AMERLTQAV 9 ++ERL QAV Sbjct: 1287 SLERLRQAV 1295>XP_006715229 Length = 1782 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AMERLTQAV 9 ++ERL QAV Sbjct: 1335 SLERLRQAV 1343>XP_005249350 Length = 1810 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AMERLTQAV 9 ++ERL QAV Sbjct: 1398 SLERLRQAV 1406>XP_005249349 Length = 1824 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AMERLTQAV 9 ++ERL QAV Sbjct: 1398 SLERLRQAV 1406>XP_005249348 Length = 1832 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AMERLTQAV 9 ++ERL QAV Sbjct: 1385 SLERLRQAV 1393>XP_005249347 Length = 1837 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AMERLTQAV 9 ++ERL QAV Sbjct: 1398 SLERLRQAV 1406>XP_005249346 Length = 1845 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AMERLTQAV 9 ++ERL QAV Sbjct: 1398 SLERLRQAV 1406>XP_006714494 Length = 1793 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AMERLTQAV 9 A+E+LT AV Sbjct: 1253 ALEKLTAAV 1261>XP_006714493 Length = 1793 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AMERLTQAV 9 A+E+LT AV Sbjct: 1253 ALEKLTAAV 1261>XP_373030 Length = 1826 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AMERLTQAV 9 A+E+LT AV Sbjct: 1286 ALEKLTAAV 1294>XP_006710222 Length = 1793 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AMERLTQAV 9 A+E+LT AV Sbjct: 1253 ALEKLTAAV 1261>XP_006710221 Length = 1793 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AMERLTQAV 9 A+E+LT AV Sbjct: 1253 ALEKLTAAV 1261>XP_001717475 Length = 1826 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AMERLTQAV 9 A+E+LT AV Sbjct: 1286 ALEKLTAAV 1294>NP_001269557 Length = 614 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MERLTQAV 9 MER+ QAV Sbjct: 563 MERVQQAV 570>NP_001269560 Length = 544 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MERLTQAV 9 MER+ QAV Sbjct: 493 MERVQQAV 500>NP_000038 Length = 589 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MERLTQAV 9 MER+ QAV Sbjct: 538 MERVQQAV 545>NP_057726 Length = 3674 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AMERLTQAV 9 A ERL QA+ Sbjct: 3193 AWERLDQAI 3201>XP_005274578 Length = 535 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MERLTQAV 9 MER+ QAV Sbjct: 484 MERVQQAV 491>XP_005274576 Length = 589 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MERLTQAV 9 MER+ QAV Sbjct: 538 MERVQQAV 545>XP_005274575 Length = 598 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MERLTQAV 9 MER+ QAV Sbjct: 547 MERVQQAV 554>XP_005254495 Length = 3694 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AMERLTQAV 9 A ERL QA+ Sbjct: 3213 AWERLDQAI 3221Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.321 0.120 0.279 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 340,683 Number of extensions: 380 Number of successful extensions: 64 Number of sequences better than 10000.0: 64 Number of HSP's gapped: 64 Number of HSP's successfully gapped: 64 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |