Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_002221 18 1482 NP_068831 18 1482 XP_006721941 18 1482 XP_006721940 18 1482 XP_006721939 18 1482 XP_006721938 18 1482 XP_006721937 18 1482 XP_006721936 18 1482 XP_006721935 18 1482 XP_006721934 18 1482 XP_005257370 18 1482 NP_001895 18 1935 NP_001091680 18 1935 NP_001091679 18 1935 XP_006713048 18 1935 XP_006713047 18 1935 XP_006713046 18 1935 XP_005264943 18 1935 NP_001177773 17 4312 NP_036485 17 4312 NP_001483 16 5631 NP_660328 16 5631 NP_079239 16 7355 NP_001073865 16 7355 NP_001127951 16 7355 NP_060573 16 7355 NP_061927 16 7355 XP_006717969 16 7355 XP_005269977 16 7355 XP_006717968 16 7355 XP_006717967 16 7355 XP_006717966 16 7355 XP_006717965 16 7355 XP_005249911 16 7355 XP_005249910 16 7355 XP_005271048 16 7355 NP_001360 15 9605 NP_115582 15 9605 NP_112181 15 9605 NP_689838 15 9605 NP_005874 15 9605 XP_006722673 15 9605 XP_006722672 15 9605 XP_006722671 15 9605 XP_006722670 15 9605 XP_005259532 15 9605 XP_005266713 15 9605 XP_006721363 15 9605 XP_005256258 15 9605 XP_005256257 15 9605 XP_005256256 15 9605 XP_005256255 15 9605 XP_006721362 15 9605 XP_006721361 15 9605 XP_005256254 15 9605 XP_005256253 15 9605 XP_005256252 15 9605 XP_005256251 15 9605 XP_006721360 15 9605 XP_005256250 15 9605 XP_005248319 15 9605 NP_055728 15 9605 NP_036497 15 9605>NP_002221 Length = 745 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALVHTVLRA 9 AL+H +LRA Sbjct: 437 ALIHAILRA 445>NP_068831 Length = 745 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALVHTVLRA 9 AL+H +LRA Sbjct: 437 ALIHAILRA 445>XP_006721941 Length = 745 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALVHTVLRA 9 AL+H +LRA Sbjct: 437 ALIHAILRA 445>XP_006721940 Length = 745 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALVHTVLRA 9 AL+H +LRA Sbjct: 437 ALIHAILRA 445>XP_006721939 Length = 745 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALVHTVLRA 9 AL+H +LRA Sbjct: 437 ALIHAILRA 445>XP_006721938 Length = 745 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALVHTVLRA 9 AL+H +LRA Sbjct: 437 ALIHAILRA 445>XP_006721937 Length = 745 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALVHTVLRA 9 AL+H +LRA Sbjct: 437 ALIHAILRA 445>XP_006721936 Length = 745 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALVHTVLRA 9 AL+H +LRA Sbjct: 437 ALIHAILRA 445>XP_006721935 Length = 762 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALVHTVLRA 9 AL+H +LRA Sbjct: 454 ALIHAILRA 462>XP_006721934 Length = 783 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALVHTVLRA 9 AL+H +LRA Sbjct: 475 ALIHAILRA 483>XP_005257370 Length = 783 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALVHTVLRA 9 AL+H +LRA Sbjct: 475 ALIHAILRA 483>NP_001895 Length = 781 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALVHTVLRA 9 ALV TVLRA Sbjct: 446 ALVRTVLRA 454>NP_001091680 Length = 781 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALVHTVLRA 9 ALV TVLRA Sbjct: 446 ALVRTVLRA 454>NP_001091679 Length = 781 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALVHTVLRA 9 ALV TVLRA Sbjct: 446 ALVRTVLRA 454>XP_006713048 Length = 720 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALVHTVLRA 9 ALV TVLRA Sbjct: 446 ALVRTVLRA 454>XP_006713047 Length = 774 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALVHTVLRA 9 ALV TVLRA Sbjct: 439 ALVRTVLRA 447>XP_006713046 Length = 774 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALVHTVLRA 9 ALV TVLRA Sbjct: 439 ALVRTVLRA 447>XP_005264943 Length = 781 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALVHTVLRA 9 ALV TVLRA Sbjct: 446 ALVRTVLRA 454>NP_001177773 Length = 291 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LVHTVLRA 9 L HT+LRA Sbjct: 168 LTHTLLRA 175>NP_036485 Length = 314 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ALVHTVLRA 9 AL+HTVL A Sbjct: 156 ALLHTVLIA 164>NP_001483 Length = 372 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ALVHTVLRA 9 AL H VLRA Sbjct: 314 ALNHAVLRA 322>NP_660328 Length = 364 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VHTVLR 8 VHTVLR Sbjct: 93 VHTVLR 98>NP_079239 Length = 718 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ALVHTVL 7 +L+HTVL Sbjct: 67 SLIHTVL 73>NP_001073865 Length = 458 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LVHTVLRA 9 L+HTVL A Sbjct: 426 LLHTVLTA 433>NP_001127951 Length = 858 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 ALVHTVL 7 AL+HT++ Sbjct: 169 ALIHTII 175>NP_060573 Length = 858 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 ALVHTVL 7 AL+HT++ Sbjct: 169 ALIHTII 175>NP_061927 Length = 835 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LVHTVLR 8 LVH VLR Sbjct: 595 LVHAVLR 601>XP_006717969 Length = 439 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LVHTVLR 8 LVH VLR Sbjct: 130 LVHAVLR 136>XP_005269977 Length = 555 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LVHTVLR 8 LVH VLR Sbjct: 246 LVHAVLR 252>XP_006717968 Length = 952 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LVHTVLR 8 LVH VLR Sbjct: 643 LVHAVLR 649>XP_006717967 Length = 952 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LVHTVLR 8 LVH VLR Sbjct: 643 LVHAVLR 649>XP_006717966 Length = 952 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LVHTVLR 8 LVH VLR Sbjct: 643 LVHAVLR 649>XP_006717965 Length = 958 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LVHTVLR 8 LVH VLR Sbjct: 649 LVHAVLR 655>XP_005249911 Length = 672 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ALVHTVL 7 +L+HTVL Sbjct: 67 SLIHTVL 73>XP_005249910 Length = 801 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ALVHTVL 7 +L+HTVL Sbjct: 67 SLIHTVL 73>XP_005271048 Length = 858 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 ALVHTVL 7 AL+HT++ Sbjct: 169 ALIHTII 175>NP_001360 Length = 4624 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 VHTVLRA 9 +HT++RA Sbjct: 2272 IHTLMRA 2278>NP_115582 Length = 1866 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VHTVLRA 9 VH VLRA Sbjct: 915 VHCVLRA 921>NP_112181 Length = 615 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VHTVLRA 9 VH +LRA Sbjct: 95 VHAILRA 101>NP_689838 Length = 744 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LVHTVLRA 9 L+HT +RA Sbjct: 469 LIHTNIRA 476>NP_005874 Length = 2303 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ALVHTVLRA 9 ALV VLRA Sbjct: 536 ALVQCVLRA 544>XP_006722673 Length = 2302 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ALVHTVLRA 9 ALV VLRA Sbjct: 535 ALVQCVLRA 543>XP_006722672 Length = 2303 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ALVHTVLRA 9 ALV VLRA Sbjct: 536 ALVQCVLRA 544>XP_006722671 Length = 2303 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ALVHTVLRA 9 ALV VLRA Sbjct: 536 ALVQCVLRA 544>XP_006722670 Length = 2326 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ALVHTVLRA 9 ALV VLRA Sbjct: 559 ALVQCVLRA 567>XP_005259532 Length = 2327 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ALVHTVLRA 9 ALV VLRA Sbjct: 560 ALVQCVLRA 568>XP_005266713 Length = 1131 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VHTVLRA 9 VHTVL++ Sbjct: 904 VHTVLKS 910>XP_006721363 Length = 1385 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VHTVLRA 9 VH VLRA Sbjct: 915 VHCVLRA 921>XP_005256258 Length = 1397 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VHTVLRA 9 VH VLRA Sbjct: 915 VHCVLRA 921>XP_005256257 Length = 1405 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VHTVLRA 9 VH VLRA Sbjct: 915 VHCVLRA 921>XP_005256256 Length = 1427 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VHTVLRA 9 VH VLRA Sbjct: 915 VHCVLRA 921>XP_005256255 Length = 1809 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VHTVLRA 9 VH VLRA Sbjct: 915 VHCVLRA 921>XP_006721362 Length = 1810 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VHTVLRA 9 VH VLRA Sbjct: 915 VHCVLRA 921>XP_006721361 Length = 1836 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VHTVLRA 9 VH VLRA Sbjct: 915 VHCVLRA 921>XP_005256254 Length = 1837 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VHTVLRA 9 VH VLRA Sbjct: 915 VHCVLRA 921>XP_005256253 Length = 1838 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VHTVLRA 9 VH VLRA Sbjct: 887 VHCVLRA 893>XP_005256252 Length = 1865 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VHTVLRA 9 VH VLRA Sbjct: 915 VHCVLRA 921>XP_005256251 Length = 1866 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VHTVLRA 9 VH VLRA Sbjct: 915 VHCVLRA 921>XP_006721360 Length = 1866 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VHTVLRA 9 VH VLRA Sbjct: 915 VHCVLRA 921>XP_005256250 Length = 1866 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VHTVLRA 9 VH VLRA Sbjct: 915 VHCVLRA 921>XP_005248319 Length = 4609 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 VHTVLRA 9 +HT++RA Sbjct: 2257 IHTLMRA 2263>NP_055728 Length = 1131 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VHTVLRA 9 VHTVL++ Sbjct: 904 VHTVLKS 910>NP_036497 Length = 311 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ALVHTVL 7 ALVH VL Sbjct: 156 ALVHVVL 162Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.338 0.136 0.369 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 482,655 Number of extensions: 527 Number of successful extensions: 63 Number of sequences better than 10000.0: 63 Number of HSP's gapped: 63 Number of HSP's successfully gapped: 63 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |