Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000258 18 1135 NP_001035957 18 1135 XP_006721990 18 1135 XP_006721989 18 1135 XP_005258041 18 1135 XP_006721988 18 1135 XP_006721987 18 1135 XP_006721986 18 1135 XP_005258040 18 1135 XP_006721985 18 1135 NP_001073883 17 2528 XP_005267748 17 2528 NP_689916 17 3301 XP_006715953 17 3301 XP_006715952 17 3301 XP_005250250 17 3301 XP_006715951 17 3301 XP_005250248 17 3301 NP_060594 16 5631 XP_006721290 16 5631 XP_005256079 16 5631 XP_005256078 16 5631 NP_001274152 16 7355 NP_002408 16 7355 NP_001139438 16 7355 NP_054858 16 7355 XP_006717927 16 7355 NP_006531 15 9605 NP_001172003 15 9605 NP_001171988 15 9605 NP_078893 15 9605 NP_065910 15 9605 NP_775901 15 9605 XP_005266736 15 9605 XP_006722498 15 9605 XP_006722497 15 9605 XP_006717349 15 9605 XP_005252266 15 9605 XP_005252265 15 9605 XP_005252264 15 9605 XP_006717348 15 9605 XP_006717347 15 9605 XP_006717346 15 9605 XP_005251190 15 9605 XP_005251188 15 9605 XP_005251189 15 9605 XP_005251187 15 9605 XP_005251186 15 9605 XP_005251185 15 9605 XP_005263222 15 9605 XP_005263221 15 9605 XP_005263220 15 9605 XP_006714345 15 9605 XP_005263219 15 9605>NP_000258 Length = 2818 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALTSLETAT 9 ALTSLET T Sbjct: 2177 ALTSLETVT 2185>NP_001035957 Length = 2839 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALTSLETAT 9 ALTSLET T Sbjct: 2198 ALTSLETVT 2206>XP_006721990 Length = 2823 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALTSLETAT 9 ALTSLET T Sbjct: 2208 ALTSLETVT 2216>XP_006721989 Length = 2823 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALTSLETAT 9 ALTSLET T Sbjct: 2208 ALTSLETVT 2216>XP_005258041 Length = 2836 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALTSLETAT 9 ALTSLET T Sbjct: 2177 ALTSLETVT 2185>XP_006721988 Length = 2846 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALTSLETAT 9 ALTSLET T Sbjct: 2187 ALTSLETVT 2195>XP_006721987 Length = 2849 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALTSLETAT 9 ALTSLET T Sbjct: 2208 ALTSLETVT 2216>XP_006721986 Length = 2854 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALTSLETAT 9 ALTSLET T Sbjct: 2195 ALTSLETVT 2203>XP_005258040 Length = 2857 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALTSLETAT 9 ALTSLET T Sbjct: 2198 ALTSLETVT 2206>XP_006721985 Length = 2867 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALTSLETAT 9 ALTSLET T Sbjct: 2208 ALTSLETVT 2216>NP_001073883 Length = 2028 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 LTSLETAT 9 +TSLETAT Sbjct: 651 VTSLETAT 658>XP_005267748 Length = 1535 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 LTSLETAT 9 +TSLETAT Sbjct: 651 VTSLETAT 658>NP_689916 Length = 1584 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ALTSLETAT 9 ALT+ ETAT Sbjct: 201 ALTNTETAT 209>XP_006715953 Length = 1584 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ALTSLETAT 9 ALT+ ETAT Sbjct: 201 ALTNTETAT 209>XP_006715952 Length = 1584 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ALTSLETAT 9 ALT+ ETAT Sbjct: 201 ALTNTETAT 209>XP_005250250 Length = 1584 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ALTSLETAT 9 ALT+ ETAT Sbjct: 201 ALTNTETAT 209>XP_006715951 Length = 1584 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ALTSLETAT 9 ALT+ ETAT Sbjct: 201 ALTNTETAT 209>XP_005250248 Length = 1584 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ALTSLETAT 9 ALT+ ETAT Sbjct: 201 ALTNTETAT 209>NP_060594 Length = 774 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LTSLETAT 9 LTSLET T Sbjct: 524 LTSLETNT 531>XP_006721290 Length = 774 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LTSLETAT 9 LTSLET T Sbjct: 524 LTSLETNT 531>XP_005256079 Length = 774 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LTSLETAT 9 LTSLET T Sbjct: 524 LTSLETNT 531>XP_005256078 Length = 774 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LTSLETAT 9 LTSLET T Sbjct: 524 LTSLETNT 531>NP_001274152 Length = 1791 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ALTSLETA 8 +LTSLET+ Sbjct: 444 SLTSLETS 451>NP_002408 Length = 3256 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LTSLETAT 9 +TSLET T Sbjct: 851 MTSLETKT 858>NP_001139438 Length = 2896 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LTSLETAT 9 +TSLET T Sbjct: 491 MTSLETKT 498>NP_054858 Length = 1791 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ALTSLETA 8 +LTSLET+ Sbjct: 444 SLTSLETS 451>XP_006717927 Length = 2406 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LTSLETAT 9 +TSLET T Sbjct: 1 MTSLETKT 8>NP_006531 Length = 1464 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LTSLETAT 9 +TSL+T+T Sbjct: 280 ITSLDTST 287>NP_001172003 Length = 1259 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LTSLETAT 9 LTSLET + Sbjct: 159 LTSLETTS 166>NP_001171988 Length = 1495 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LTSLETAT 9 LTSLET + Sbjct: 159 LTSLETTS 166>NP_078893 Length = 1495 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LTSLETAT 9 LTSLET + Sbjct: 159 LTSLETTS 166>NP_065910 Length = 1996 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TSLETAT 9 +SLETAT Sbjct: 367 SSLETAT 373>NP_775901 Length = 2226 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ALTSLET 7 ALT+LET Sbjct: 1392 ALTTLET 1398>XP_005266736 Length = 1314 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ALTSLET 7 ALT+LET Sbjct: 480 ALTTLET 486>XP_006722498 Length = 2059 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ALTSLET 7 ALT+LET Sbjct: 1393 ALTTLET 1399>XP_006722497 Length = 2227 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ALTSLET 7 ALT+LET Sbjct: 1393 ALTTLET 1399>XP_006717349 Length = 1046 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LTSLETAT 9 LTSLET + Sbjct: 159 LTSLETTS 166>XP_005252266 Length = 1046 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LTSLETAT 9 LTSLET + Sbjct: 159 LTSLETTS 166>XP_005252265 Length = 1381 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LTSLETAT 9 LTSLET + Sbjct: 159 LTSLETTS 166>XP_005252264 Length = 1478 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LTSLETAT 9 LTSLET + Sbjct: 159 LTSLETTS 166>XP_006717348 Length = 1541 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LTSLETAT 9 LTSLET + Sbjct: 159 LTSLETTS 166>XP_006717347 Length = 1541 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LTSLETAT 9 LTSLET + Sbjct: 159 LTSLETTS 166>XP_006717346 Length = 1541 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LTSLETAT 9 LTSLET + Sbjct: 159 LTSLETTS 166>XP_005251190 Length = 1395 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LTSLETAT 9 +TSL+T+T Sbjct: 280 ITSLDTST 287>XP_005251188 Length = 1464 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LTSLETAT 9 +TSL+T+T Sbjct: 280 ITSLDTST 287>XP_005251189 Length = 1464 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LTSLETAT 9 +TSL+T+T Sbjct: 280 ITSLDTST 287>XP_005251187 Length = 1464 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LTSLETAT 9 +TSL+T+T Sbjct: 280 ITSLDTST 287>XP_005251186 Length = 1464 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LTSLETAT 9 +TSL+T+T Sbjct: 280 ITSLDTST 287>XP_005251185 Length = 1464 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LTSLETAT 9 +TSL+T+T Sbjct: 280 ITSLDTST 287>XP_005263222 Length = 1820 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TSLETAT 9 +SLETAT Sbjct: 191 SSLETAT 197>XP_005263221 Length = 1820 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TSLETAT 9 +SLETAT Sbjct: 191 SSLETAT 197>XP_005263220 Length = 1820 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TSLETAT 9 +SLETAT Sbjct: 191 SSLETAT 197>XP_006714345 Length = 1961 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TSLETAT 9 +SLETAT Sbjct: 332 SSLETAT 338>XP_005263219 Length = 1996 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TSLETAT 9 +SLETAT Sbjct: 367 SSLETAT 373Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.295 0.102 0.225 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 261,073 Number of extensions: 381 Number of successful extensions: 54 Number of sequences better than 10000.0: 54 Number of HSP's gapped: 54 Number of HSP's successfully gapped: 54 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |