Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 18 1482 XP_006716142 18 1482 XP_005250088 18 1482 XP_006716141 18 1482 XP_005250085 18 1482 XP_006716140 18 1482 XP_005250084 18 1482 XP_005250083 18 1482 XP_005250082 18 1482 NP_008913 16 5631 NP_065770 16 5631 NP_872393 16 5631 XP_005276260 16 5631 XP_005269222 16 5631 XP_006712515 16 5631 XP_006712513 16 5631 XP_006712512 16 5631 XP_006712511 16 5631 XP_006712510 16 5631 XP_006712509 16 5631 XP_005246533 16 5631 XP_006712508 16 5631 XP_005264734 16 5631 XP_005275976 16 5631 NP_115893 16 5631 NP_671725 16 7355 NP_757379 16 7355 NP_597719 16 7355 NP_001171922 16 7355 NP_001274730 16 7355 XP_006719916 16 7355 XP_006719915 16 7355 XP_006719914 16 7355 XP_005266530 16 7355 XP_006719913 16 7355 XP_006719912 16 7355 XP_006719911 16 7355 XP_006719910 16 7355 XP_006719909 16 7355 XP_006713569 16 7355 XP_006710418 16 7355 NP_112567 16 7355 NP_001071159 15 9605 NP_079016 15 9605 NP_612504 15 9605 NP_065776 15 9605 XP_006718976 15 9605 XP_005277780 15 9605 XP_006715966 15 9605 XP_005250277 15 9605 XP_006715965 15 9605 XP_005250276 15 9605 XP_006715964 15 9605 XP_006715963 15 9605>NP_733751 Length = 4911 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALSAKQHTA 9 ALSAKQ TA Sbjct: 3211 ALSAKQRTA 3219>XP_006716142 Length = 4927 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALSAKQHTA 9 ALSAKQ TA Sbjct: 3228 ALSAKQRTA 3236>XP_005250088 Length = 4928 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALSAKQHTA 9 ALSAKQ TA Sbjct: 3228 ALSAKQRTA 3236>XP_006716141 Length = 4959 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALSAKQHTA 9 ALSAKQ TA Sbjct: 3228 ALSAKQRTA 3236>XP_005250085 Length = 4979 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALSAKQHTA 9 ALSAKQ TA Sbjct: 3228 ALSAKQRTA 3236>XP_006716140 Length = 4982 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALSAKQHTA 9 ALSAKQ TA Sbjct: 3228 ALSAKQRTA 3236>XP_005250084 Length = 4982 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALSAKQHTA 9 ALSAKQ TA Sbjct: 3228 ALSAKQRTA 3236>XP_005250083 Length = 4982 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALSAKQHTA 9 ALSAKQ TA Sbjct: 3227 ALSAKQRTA 3235>XP_005250082 Length = 4983 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALSAKQHTA 9 ALSAKQ TA Sbjct: 3228 ALSAKQRTA 3236>NP_008913 Length = 326 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LSAKQHTA 9 + AK+HTA Sbjct: 313 MKAKEHTA 320>NP_065770 Length = 2036 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ALSAKQHTA 9 ALSA QH A Sbjct: 147 ALSAYQHPA 155>NP_872393 Length = 3234 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSAKQHTA 9 LSA+QH A Sbjct: 2865 LSARQHIA 2872>XP_005276260 Length = 160 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ALSAKQH 7 ALSA+QH Sbjct: 34 ALSAQQH 40>XP_005269222 Length = 326 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LSAKQHTA 9 + AK+HTA Sbjct: 313 MKAKEHTA 320>XP_006712515 Length = 3232 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSAKQHTA 9 LSA+QH A Sbjct: 2863 LSARQHIA 2870>XP_006712513 Length = 3220 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSAKQHTA 9 LSA+QH A Sbjct: 2832 LSARQHIA 2839>XP_006712512 Length = 3237 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSAKQHTA 9 LSA+QH A Sbjct: 2868 LSARQHIA 2875>XP_006712511 Length = 3256 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSAKQHTA 9 LSA+QH A Sbjct: 2868 LSARQHIA 2875>XP_006712510 Length = 3305 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSAKQHTA 9 LSA+QH A Sbjct: 2936 LSARQHIA 2943>XP_006712509 Length = 3319 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSAKQHTA 9 LSA+QH A Sbjct: 2931 LSARQHIA 2938>XP_005246533 Length = 3323 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSAKQHTA 9 LSA+QH A Sbjct: 2935 LSARQHIA 2942>XP_006712508 Length = 3324 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSAKQHTA 9 LSA+QH A Sbjct: 2936 LSARQHIA 2943>XP_005264734 Length = 160 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ALSAKQH 7 ALSA+QH Sbjct: 34 ALSAQQH 40>XP_005275976 Length = 160 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ALSAKQH 7 ALSA+QH Sbjct: 34 ALSAQQH 40>NP_115893 Length = 3258 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSAKQHTA 9 LSA+QH A Sbjct: 2870 LSARQHIA 2877>NP_671725 Length = 382 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LSAKQHTA 9 L AKQH A Sbjct: 366 LRAKQHAA 373>NP_757379 Length = 377 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LSAKQHTA 9 L AKQH A Sbjct: 361 LRAKQHAA 368>NP_597719 Length = 770 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ALSAKQHT 8 ALS+K+H+ Sbjct: 731 ALSSKEHS 738>NP_001171922 Length = 1619 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SAKQHTA 9 SAKQH A Sbjct: 541 SAKQHIA 547>NP_001274730 Length = 578 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LSAKQHTA 9 +SAK HT+ Sbjct: 257 ISAKDHTS 264>XP_006719916 Length = 1482 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SAKQHTA 9 SAKQH A Sbjct: 400 SAKQHIA 406>XP_006719915 Length = 1531 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SAKQHTA 9 SAKQH A Sbjct: 400 SAKQHIA 406>XP_006719914 Length = 1639 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SAKQHTA 9 SAKQH A Sbjct: 561 SAKQHIA 567>XP_005266530 Length = 1643 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SAKQHTA 9 SAKQH A Sbjct: 561 SAKQHIA 567>XP_006719913 Length = 1650 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SAKQHTA 9 SAKQH A Sbjct: 561 SAKQHIA 567>XP_006719912 Length = 1672 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SAKQHTA 9 SAKQH A Sbjct: 541 SAKQHIA 547>XP_006719911 Length = 1688 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SAKQHTA 9 SAKQH A Sbjct: 561 SAKQHIA 567>XP_006719910 Length = 1692 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SAKQHTA 9 SAKQH A Sbjct: 561 SAKQHIA 567>XP_006719909 Length = 1692 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SAKQHTA 9 SAKQH A Sbjct: 561 SAKQHIA 567>XP_006713569 Length = 341 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ALSAKQHT 8 ALS+K+H+ Sbjct: 302 ALSSKEHS 309>XP_006710418 Length = 377 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LSAKQHTA 9 L AKQH A Sbjct: 361 LRAKQHAA 368>NP_112567 Length = 1623 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SAKQHTA 9 SAKQH A Sbjct: 541 SAKQHIA 547>NP_001071159 Length = 447 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ALSAKQHT 8 ALSA QH+ Sbjct: 215 ALSALQHS 222>NP_079016 Length = 618 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ALSAKQHT 8 ALSA QH+ Sbjct: 386 ALSALQHS 393>NP_612504 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SAKQHT 8 S+KQHT Sbjct: 52 SSKQHT 57>NP_065776 Length = 861 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SAKQHT 8 S+KQHT Sbjct: 176 SSKQHT 181>XP_006718976 Length = 598 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ALSAKQHT 8 ALSA QH+ Sbjct: 386 ALSALQHS 393>XP_005277780 Length = 629 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ALSAKQHT 8 ALSA QH+ Sbjct: 386 ALSALQHS 393>XP_006715966 Length = 856 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SAKQHT 8 S+KQHT Sbjct: 176 SSKQHT 181>XP_005250277 Length = 862 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SAKQHT 8 S+KQHT Sbjct: 176 SSKQHT 181>XP_006715965 Length = 872 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SAKQHT 8 S+KQHT Sbjct: 176 SSKQHT 181>XP_005250276 Length = 873 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SAKQHT 8 S+KQHT Sbjct: 176 SSKQHT 181>XP_006715964 Length = 964 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SAKQHT 8 S+KQHT Sbjct: 176 SSKQHT 181>XP_006715963 Length = 975 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SAKQHT 8 S+KQHT Sbjct: 176 SSKQHT 181Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.304 0.102 0.253 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 521,753 Number of extensions: 380 Number of successful extensions: 54 Number of sequences better than 10000.0: 54 Number of HSP's gapped: 54 Number of HSP's successfully gapped: 54 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |