Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 18 1135 NP_001075109 18 1135 NP_001092757 16 5631 NP_056998 16 5631 NP_003310 16 5631 NP_001165763 16 5631 NP_597676 16 5631 NP_001243779 16 5631 NP_596869 16 5631 NP_060023 16 5631 NP_001171500 16 5631 NP_001910 16 5631 XP_005255403 16 5631 XP_006716433 16 5631 XP_005273633 16 5631 XP_006716432 16 5631 XP_005273632 16 5631 XP_005246888 16 5631 XP_006712788 16 5631 XP_006712787 16 5631 XP_006712786 16 5631 NP_112561 16 5631 NP_001254479 16 5631 NP_597681 16 5631 NP_005752 16 7355 NP_001248385 16 7355 NP_002339 16 7355 NP_001028839 16 7355 NP_001248386 16 7355 XP_006719249 16 7355 XP_006711388 16 7355 XP_006711387 16 7355 XP_006711386 16 7355 XP_006711385 16 7355 XP_006711384 16 7355 XP_006711383 16 7355 XP_005245221 16 7355 NP_071405 16 7355 NP_001257354 15 9605 NP_003609 15 9605 NP_060009 15 9605 XP_006721125 15 9605 XP_005245751 15 9605 XP_005245750 15 9605 XP_005277490 15 9605 XP_005277491 15 9605 XP_005277489 15 9605 NP_612440 15 9605>NP_008835 Length = 4128 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ALQTSLVF 8 ALQTSLVF Sbjct: 52 ALQTSLVF 59>NP_001075109 Length = 4097 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ALQTSLVF 8 ALQTSLVF Sbjct: 52 ALQTSLVF 59>NP_001092757 Length = 466 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TSLVFP 9 TSLVFP Sbjct: 353 TSLVFP 358>NP_056998 Length = 958 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TSLVFP 9 TSLVFP Sbjct: 300 TSLVFP 305>NP_003310 Length = 26926 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TSLVFP 9 TSLVFP Sbjct: 24586 TSLVFP 24591>NP_001165763 Length = 447 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TSLVFP 9 TSLVFP Sbjct: 334 TSLVFP 339>NP_597676 Length = 27051 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TSLVFP 9 TSLVFP Sbjct: 24711 TSLVFP 24716>NP_001243779 Length = 34350 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TSLVFP 9 TSLVFP Sbjct: 32010 TSLVFP 32015>NP_596869 Length = 33423 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TSLVFP 9 TSLVFP Sbjct: 31083 TSLVFP 31088>NP_060023 Length = 1556 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LQTSLVFP 9 LQTSLV P Sbjct: 1492 LQTSLVRP 1499>NP_001171500 Length = 285 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ALQTSLVFP 9 ALQ L+FP Sbjct: 188 ALQLGLLFP 196>NP_001910 Length = 302 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ALQTSLVFP 9 ALQ L+FP Sbjct: 205 ALQLGLLFP 213>XP_005255403 Length = 744 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TSLVFP 9 TSLVFP Sbjct: 86 TSLVFP 91>XP_006716433 Length = 3069 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 QTSLVFP 9 QTS VFP Sbjct: 495 QTSTVFP 501>XP_005273633 Length = 3069 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 QTSLVFP 9 QTS VFP Sbjct: 495 QTSTVFP 501>XP_006716432 Length = 3172 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 QTSLVFP 9 QTS VFP Sbjct: 598 QTSTVFP 604>XP_005273632 Length = 3172 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 QTSLVFP 9 QTS VFP Sbjct: 598 QTSTVFP 604>XP_005246888 Length = 22663 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TSLVFP 9 TSLVFP Sbjct: 20323 TSLVFP 20328>XP_006712788 Length = 24022 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TSLVFP 9 TSLVFP Sbjct: 21682 TSLVFP 21687>XP_006712787 Length = 33978 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TSLVFP 9 TSLVFP Sbjct: 31638 TSLVFP 31643>XP_006712786 Length = 35484 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TSLVFP 9 TSLVFP Sbjct: 33144 TSLVFP 33149>NP_112561 Length = 2789 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 QTSLVFP 9 QTS VFP Sbjct: 215 QTSTVFP 221>NP_001254479 Length = 35991 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TSLVFP 9 TSLVFP Sbjct: 33651 TSLVFP 33656>NP_597681 Length = 27118 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TSLVFP 9 TSLVFP Sbjct: 24778 TSLVFP 24783>NP_005752 Length = 1568 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ALQTSLVF 8 ALQT LV+ Sbjct: 1094 ALQTKLVY 1101>NP_001248385 Length = 641 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LQTSLVF 8 LQTSL+F Sbjct: 32 LQTSLLF 38>NP_002339 Length = 655 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LQTSLVF 8 LQTSL+F Sbjct: 32 LQTSLLF 38>NP_001028839 Length = 193 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LQTSLVF 8 LQTSL+F Sbjct: 32 LQTSLLF 38>NP_001248386 Length = 565 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LQTSLVF 8 LQTSL+F Sbjct: 32 LQTSLLF 38>XP_006719249 Length = 1555 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ALQTSLVF 8 ALQT LV+ Sbjct: 1081 ALQTKLVY 1088>XP_006711388 Length = 551 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LQTSLVF 8 LQTSL+F Sbjct: 32 LQTSLLF 38>XP_006711387 Length = 560 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LQTSLVF 8 LQTSL+F Sbjct: 32 LQTSLLF 38>XP_006711386 Length = 574 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LQTSLVF 8 LQTSL+F Sbjct: 32 LQTSLLF 38>XP_006711385 Length = 618 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LQTSLVF 8 LQTSL+F Sbjct: 32 LQTSLLF 38>XP_006711384 Length = 632 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LQTSLVF 8 LQTSL+F Sbjct: 32 LQTSLLF 38>XP_006711383 Length = 650 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LQTSLVF 8 LQTSL+F Sbjct: 32 LQTSLLF 38>XP_005245221 Length = 664 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LQTSLVF 8 LQTSL+F Sbjct: 32 LQTSLLF 38>NP_071405 Length = 513 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QTSLVFP 9 QT+L+FP Sbjct: 230 QTALMFP 236>NP_001257354 Length = 873 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ALQTSLV 7 ALQTS+V Sbjct: 670 ALQTSIV 676>NP_003609 Length = 894 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ALQTSLV 7 ALQTS+V Sbjct: 691 ALQTSIV 697>NP_060009 Length = 4116 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LQTSLVFP 9 ++TSL FP Sbjct: 191 VKTSLTFP 198>XP_006721125 Length = 4070 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LQTSLVFP 9 ++TSL FP Sbjct: 162 VKTSLTFP 169>XP_005245751 Length = 424 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 QTSLVF 8 QTSLVF Sbjct: 54 QTSLVF 59>XP_005245750 Length = 429 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 QTSLVF 8 QTSLVF Sbjct: 54 QTSLVF 59>XP_005277490 Length = 1143 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LQTSLVFP 9 L TS++FP Sbjct: 41 LTTSMLFP 48>XP_005277491 Length = 1143 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LQTSLVFP 9 L TS++FP Sbjct: 41 LTTSMLFP 48>XP_005277489 Length = 1181 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LQTSLVFP 9 L TS++FP Sbjct: 41 LTTSMLFP 48>NP_612440 Length = 412 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ALQTSLVF 8 A QT+LVF Sbjct: 295 ACQTALVF 302Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.327 0.134 0.372 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 336,492 Number of extensions: 396 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |