Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 18 1482 XP_006716142 18 1482 XP_005250088 18 1482 XP_006716141 18 1482 XP_005250085 18 1482 XP_006716140 18 1482 XP_005250084 18 1482 XP_005250083 18 1482 XP_005250082 18 1482 NP_982284 17 4312 XP_005250571 17 4312 XP_005250570 17 4312 XP_005245099 17 4312 XP_005245098 17 4312 XP_005245097 17 4312 NP_065930 17 4312 NP_004371 16 5631 NP_001073315 16 5631 NP_065810 16 5631 XP_005255182 16 5631 XP_006720911 16 5631 XP_005255181 16 5631 XP_006720684 16 5631 NP_057726 16 7355 NP_036359 16 7355 NP_714928 16 7355 XP_006724931 16 7355 XP_006724510 16 7355 XP_005254495 16 7355 XP_006713930 16 7355 XP_006713929 16 7355 XP_006713928 16 7355 XP_006726390 15 9605 XP_006726389 15 9605 XP_006726388 15 9605 XP_006726387 15 9605 XP_006711142 15 9605 XP_006711141 15 9605 XP_006711140 15 9605 XP_006710131 15 9605 XP_006710130 15 9605 XP_006710129 15 9605 XP_006710128 15 9605>NP_733751 Length = 4911 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALQQRMLME 9 ALQQRM ME Sbjct: 3424 ALQQRMEME 3432>XP_006716142 Length = 4927 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALQQRMLME 9 ALQQRM ME Sbjct: 3441 ALQQRMEME 3449>XP_005250088 Length = 4928 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALQQRMLME 9 ALQQRM ME Sbjct: 3441 ALQQRMEME 3449>XP_006716141 Length = 4959 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALQQRMLME 9 ALQQRM ME Sbjct: 3441 ALQQRMEME 3449>XP_005250085 Length = 4979 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALQQRMLME 9 ALQQRM ME Sbjct: 3441 ALQQRMEME 3449>XP_006716140 Length = 4982 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALQQRMLME 9 ALQQRM ME Sbjct: 3441 ALQQRMEME 3449>XP_005250084 Length = 4982 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALQQRMLME 9 ALQQRM ME Sbjct: 3441 ALQQRMEME 3449>XP_005250083 Length = 4982 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALQQRMLME 9 ALQQRM ME Sbjct: 3440 ALQQRMEME 3448>XP_005250082 Length = 4983 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALQQRMLME 9 ALQQRM ME Sbjct: 3441 ALQQRMEME 3449>NP_982284 Length = 1478 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALQQRMLME 9 +LQQ MLM+ Sbjct: 902 SLQQEMLMQ 910>XP_005250571 Length = 823 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALQQRMLME 9 AL QR+L+E Sbjct: 251 ALHQRLLLE 259>XP_005250570 Length = 904 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALQQRMLME 9 AL QR+L+E Sbjct: 332 ALHQRLLLE 340>XP_005245099 Length = 1462 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALQQRMLME 9 +LQQ MLM+ Sbjct: 886 SLQQEMLMQ 894>XP_005245098 Length = 1473 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALQQRMLME 9 +LQQ MLM+ Sbjct: 897 SLQQEMLMQ 905>XP_005245097 Length = 1489 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALQQRMLME 9 +LQQ MLM+ Sbjct: 913 SLQQEMLMQ 921>NP_065930 Length = 955 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALQQRMLME 9 AL QR+L+E Sbjct: 383 ALHQRLLLE 391>NP_004371 Length = 2442 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALQQRMLME 9 ALQQR+L + Sbjct: 2290 ALQQRILQQ 2298>NP_001073315 Length = 2404 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALQQRMLME 9 ALQQR+L + Sbjct: 2252 ALQQRILQQ 2260>NP_065810 Length = 4700 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALQQRMLME 9 ALQQ+ L+E Sbjct: 1486 ALQQKYLLE 1494>XP_005255182 Length = 2303 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALQQRMLME 9 ALQQR+L + Sbjct: 2151 ALQQRILQQ 2159>XP_006720911 Length = 2355 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALQQRMLME 9 ALQQR+L + Sbjct: 2203 ALQQRILQQ 2211>XP_005255181 Length = 2427 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALQQRMLME 9 ALQQR+L + Sbjct: 2275 ALQQRILQQ 2283>XP_006720684 Length = 4713 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALQQRMLME 9 ALQQ+ L+E Sbjct: 1499 ALQQKYLLE 1507>NP_057726 Length = 3674 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ALQQRML 7 ALQQR+L Sbjct: 413 ALQQRLL 419>NP_036359 Length = 516 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQQRMLME 9 LQQR+L E Sbjct: 259 LQQRLLRE 266>NP_714928 Length = 992 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQQRMLME 9 LQQR+L E Sbjct: 721 LQQRLLAE 728>XP_006724931 Length = 377 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQQRMLME 9 LQQR+L E Sbjct: 120 LQQRLLRE 127>XP_006724510 Length = 377 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQQRMLME 9 LQQR+L E Sbjct: 120 LQQRLLRE 127>XP_005254495 Length = 3694 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ALQQRML 7 ALQQR+L Sbjct: 433 ALQQRLL 439>XP_006713930 Length = 772 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQQRMLME 9 LQQR+L E Sbjct: 721 LQQRLLAE 728>XP_006713929 Length = 930 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQQRMLME 9 LQQR+L E Sbjct: 721 LQQRLLAE 728>XP_006713928 Length = 931 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQQRMLME 9 LQQR+L E Sbjct: 721 LQQRLLAE 728>XP_006726390 Length = 1353 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LQQRML 7 LQQRML Sbjct: 650 LQQRML 655>XP_006726389 Length = 1471 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LQQRML 7 LQQRML Sbjct: 768 LQQRML 773>XP_006726388 Length = 1489 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LQQRML 7 LQQRML Sbjct: 786 LQQRML 791>XP_006726387 Length = 1497 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LQQRML 7 LQQRML Sbjct: 834 LQQRML 839>XP_006711142 Length = 1471 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LQQRML 7 LQQRML Sbjct: 768 LQQRML 773>XP_006711141 Length = 1489 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LQQRML 7 LQQRML Sbjct: 786 LQQRML 791>XP_006711140 Length = 1497 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LQQRML 7 LQQRML Sbjct: 834 LQQRML 839>XP_006710131 Length = 1353 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LQQRML 7 LQQRML Sbjct: 650 LQQRML 655>XP_006710130 Length = 1471 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LQQRML 7 LQQRML Sbjct: 768 LQQRML 773>XP_006710129 Length = 1489 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LQQRML 7 LQQRML Sbjct: 786 LQQRML 791>XP_006710128 Length = 1497 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LQQRML 7 LQQRML Sbjct: 834 LQQRML 839Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.333 0.130 0.309 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 400,600 Number of extensions: 744 Number of successful extensions: 43 Number of sequences better than 10000.0: 43 Number of HSP's gapped: 43 Number of HSP's successfully gapped: 43 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |