Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 20 299 NP_001075109 20 299 NP_001013725 16 5631 NP_001229268 16 5631 NP_002618 16 5631 XP_005254450 16 5631 XP_005254449 16 5631 XP_005252524 16 5631 XP_005252523 16 5631 XP_006717512 16 5631 XP_005252522 16 5631 NP_001274732 16 7355 NP_115703 16 7355 NP_932160 16 7355 NP_001274733 16 7355 NP_932161 16 7355 NP_932163 16 7355 NP_079173 16 7355 NP_001259041 16 7355 NP_001259040 16 7355 NP_001259039 16 7355 NP_001259038 16 7355 NP_001259035 16 7355 NP_001259042 16 7355 NP_057736 16 7355 XP_006718089 16 7355 XP_006718088 16 7355 XP_006718087 16 7355 XP_006718086 16 7355 XP_006718085 16 7355 XP_006718084 16 7355 XP_005245551 16 7355 XP_006711616 16 7355 XP_006711615 16 7355 XP_006711612 16 7355 XP_006711611 16 7355 XP_005245548 16 7355 XP_006711610 16 7355 XP_006711609 16 7355 XP_006711608 16 7355 XP_006711607 16 7355 XP_006711606 16 7355 XP_006711605 16 7355>NP_008835 Length = 4128 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ALQLRTYSI 9 ALQLRTYS+ Sbjct: 3785 ALQLRTYSV 3793>NP_001075109 Length = 4097 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ALQLRTYSI 9 ALQLRTYS+ Sbjct: 3785 ALQLRTYSV 3793>NP_001013725 Length = 1649 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ALQLRTYSI 9 ALQ R YSI Sbjct: 1190 ALQERNYSI 1198>NP_001229268 Length = 776 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALQLRTYSI 9 A Q+RT+SI Sbjct: 484 ATQMRTHSI 492>NP_002618 Length = 784 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALQLRTYSI 9 A Q+RT+SI Sbjct: 492 ATQMRTHSI 500>XP_005254450 Length = 1505 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ALQLRTYSI 9 ALQ R YSI Sbjct: 1190 ALQERNYSI 1198>XP_005254449 Length = 1626 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ALQLRTYSI 9 ALQ R YSI Sbjct: 1190 ALQERNYSI 1198>XP_005252524 Length = 746 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALQLRTYSI 9 A Q+RT+SI Sbjct: 454 ATQMRTHSI 462>XP_005252523 Length = 784 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALQLRTYSI 9 A Q+RT+SI Sbjct: 492 ATQMRTHSI 500>XP_006717512 Length = 797 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALQLRTYSI 9 A Q+RT+SI Sbjct: 454 ATQMRTHSI 462>XP_005252522 Length = 835 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALQLRTYSI 9 A Q+RT+SI Sbjct: 492 ATQMRTHSI 500>NP_001274732 Length = 359 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQLRTYSI 9 L LRTYS+ Sbjct: 105 LILRTYSV 112>NP_115703 Length = 377 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQLRTYSI 9 L LRTYS+ Sbjct: 105 LILRTYSV 112>NP_932160 Length = 361 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQLRTYSI 9 L LRTYS+ Sbjct: 105 LILRTYSV 112>NP_001274733 Length = 307 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQLRTYSI 9 L LRTYS+ Sbjct: 105 LILRTYSV 112>NP_932161 Length = 338 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQLRTYSI 9 L LRTYS+ Sbjct: 105 LILRTYSV 112>NP_932163 Length = 377 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQLRTYSI 9 L LRTYS+ Sbjct: 105 LILRTYSV 112>NP_079173 Length = 351 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQLRTYSI 9 LQL TYS+ Sbjct: 223 LQLGTYSL 230>NP_001259041 Length = 211 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQLRTYSI 9 LQL TYS+ Sbjct: 83 LQLGTYSL 90>NP_001259040 Length = 211 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQLRTYSI 9 LQL TYS+ Sbjct: 83 LQLGTYSL 90>NP_001259039 Length = 211 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQLRTYSI 9 LQL TYS+ Sbjct: 83 LQLGTYSL 90>NP_001259038 Length = 211 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQLRTYSI 9 LQL TYS+ Sbjct: 83 LQLGTYSL 90>NP_001259035 Length = 283 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQLRTYSI 9 LQL TYS+ Sbjct: 155 LQLGTYSL 162>NP_001259042 Length = 211 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQLRTYSI 9 LQL TYS+ Sbjct: 83 LQLGTYSL 90>NP_057736 Length = 848 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LQLRTYSI 9 L+LR+YS+ Sbjct: 26 LELRSYSL 33>XP_006718089 Length = 329 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQLRTYSI 9 L LRTYS+ Sbjct: 105 LILRTYSV 112>XP_006718088 Length = 345 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQLRTYSI 9 L LRTYS+ Sbjct: 105 LILRTYSV 112>XP_006718087 Length = 359 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQLRTYSI 9 L LRTYS+ Sbjct: 105 LILRTYSV 112>XP_006718086 Length = 368 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQLRTYSI 9 L LRTYS+ Sbjct: 105 LILRTYSV 112>XP_006718085 Length = 384 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQLRTYSI 9 L LRTYS+ Sbjct: 105 LILRTYSV 112>XP_006718084 Length = 384 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQLRTYSI 9 L LRTYS+ Sbjct: 105 LILRTYSV 112>XP_005245551 Length = 211 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQLRTYSI 9 LQL TYS+ Sbjct: 83 LQLGTYSL 90>XP_006711616 Length = 346 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQLRTYSI 9 LQL TYS+ Sbjct: 218 LQLGTYSL 225>XP_006711615 Length = 346 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQLRTYSI 9 LQL TYS+ Sbjct: 218 LQLGTYSL 225>XP_006711612 Length = 374 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQLRTYSI 9 LQL TYS+ Sbjct: 246 LQLGTYSL 253>XP_006711611 Length = 433 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQLRTYSI 9 LQL TYS+ Sbjct: 305 LQLGTYSL 312>XP_005245548 Length = 454 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQLRTYSI 9 LQL TYS+ Sbjct: 326 LQLGTYSL 333>XP_006711610 Length = 457 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQLRTYSI 9 LQL TYS+ Sbjct: 329 LQLGTYSL 336>XP_006711609 Length = 457 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQLRTYSI 9 LQL TYS+ Sbjct: 329 LQLGTYSL 336>XP_006711608 Length = 482 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQLRTYSI 9 LQL TYS+ Sbjct: 354 LQLGTYSL 361>XP_006711607 Length = 485 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQLRTYSI 9 LQL TYS+ Sbjct: 357 LQLGTYSL 364>XP_006711606 Length = 506 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQLRTYSI 9 LQL TYS+ Sbjct: 378 LQLGTYSL 385>XP_006711605 Length = 551 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQLRTYSI 9 LQL TYS+ Sbjct: 423 LQLGTYSL 430Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.329 0.135 0.344 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 440,381 Number of extensions: 520 Number of successful extensions: 43 Number of sequences better than 10000.0: 43 Number of HSP's gapped: 43 Number of HSP's successfully gapped: 43 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |