Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004251 18 1482 NP_001265522 17 2528 NP_005580 17 2528 NP_689775 16 5631 NP_112589 16 5631 XP_006716359 16 5631 XP_006716358 16 5631 XP_006716357 16 5631 XP_006711414 16 5631 NP_038466 16 7355 NP_444295 16 7355 NP_064516 16 7355 NP_001269461 16 7355 NP_056154 16 7355 NP_001269460 16 7355 NP_852107 16 7355 XP_006723822 16 7355 XP_005245404 16 7355 NP_001189368 15 9605 NP_694574 15 9605 NP_001278261 15 9605 NP_001034553 15 9605 NP_001159580 15 9605 NP_057165 15 9605 NP_001159582 15 9605 NP_001159581 15 9605 XP_005256319 15 9605 XP_006721414 15 9605 XP_005262923 15 9605 XP_005262922 15 9605 XP_005262921 15 9605 XP_005262920 15 9605 XP_005262919 15 9605 XP_005262918 15 9605 XP_003846678 15 9605>NP_004251 Length = 1208 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALLTLQQGK 9 ALLTL QGK Sbjct: 687 ALLTLLQGK 695>NP_001265522 Length = 522 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLTLQQGK 9 L+TL+QGK Sbjct: 109 LITLEQGK 116>NP_005580 Length = 535 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLTLQQGK 9 L+TL+QGK Sbjct: 122 LITLEQGK 129>NP_689775 Length = 1023 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LTLQQGK 9 LTLQQG+ Sbjct: 731 LTLQQGQ 737>NP_112589 Length = 268 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LTLQQGK 9 LTL+QGK Sbjct: 213 LTLRQGK 219>XP_006716359 Length = 1028 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LTLQQGK 9 LTLQQG+ Sbjct: 736 LTLQQGQ 742>XP_006716358 Length = 1028 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LTLQQGK 9 LTLQQG+ Sbjct: 736 LTLQQGQ 742>XP_006716357 Length = 1028 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LTLQQGK 9 LTLQQG+ Sbjct: 736 LTLQQGQ 742>XP_006711414 Length = 618 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 ALLTLQQG 8 ALLT QQG Sbjct: 6 ALLTHQQG 13>NP_038466 Length = 589 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ALLTLQQG 8 ALL +QQG Sbjct: 462 ALLQIQQG 469>NP_444295 Length = 561 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ALLTLQQG 8 ALL +QQG Sbjct: 434 ALLQIQQG 441>NP_064516 Length = 601 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ALLTLQQG 8 ALL +QQG Sbjct: 468 ALLQIQQG 475>NP_001269461 Length = 1102 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LTLQQG 8 LTLQQG Sbjct: 552 LTLQQG 557>NP_056154 Length = 1102 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LTLQQG 8 LTLQQG Sbjct: 552 LTLQQG 557>NP_001269460 Length = 1102 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LTLQQG 8 LTLQQG Sbjct: 552 LTLQQG 557>NP_852107 Length = 1102 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LTLQQG 8 LTLQQG Sbjct: 552 LTLQQG 557>XP_006723822 Length = 1111 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LTLQQG 8 LTLQQG Sbjct: 561 LTLQQG 566>XP_005245404 Length = 565 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ALLTLQQG 8 ALL +QQG Sbjct: 468 ALLQIQQG 475>NP_001189368 Length = 454 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ALLTLQQGK 9 ALLT+ GK Sbjct: 388 ALLTVTSGK 396>NP_694574 Length = 896 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLTLQQGK 9 LLTL QG+ Sbjct: 186 LLTLTQGE 193>NP_001278261 Length = 841 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LLTLQQG 8 LLT+Q+G Sbjct: 653 LLTMQEG 659>NP_001034553 Length = 1323 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LLTLQQG 8 LLT+Q+G Sbjct: 1135 LLTMQEG 1141>NP_001159580 Length = 1123 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LTLQQGK 9 LT+Q+GK Sbjct: 937 LTVQEGK 943>NP_057165 Length = 1106 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LTLQQGK 9 LT+Q+GK Sbjct: 920 LTVQEGK 926>NP_001159582 Length = 672 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LTLQQGK 9 LT+Q+GK Sbjct: 433 LTVQEGK 439>NP_001159581 Length = 777 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LTLQQGK 9 LT+Q+GK Sbjct: 538 LTVQEGK 544>XP_005256319 Length = 678 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLTLQQGK 9 LLTL QG+ Sbjct: 186 LLTLTQGE 193>XP_006721414 Length = 810 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLTLQQGK 9 LLTL QG+ Sbjct: 100 LLTLTQGE 107>XP_005262923 Length = 1018 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LTLQQGK 9 LT+Q+GK Sbjct: 779 LTVQEGK 785>XP_005262922 Length = 1276 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LTLQQGK 9 LT+Q+GK Sbjct: 1037 LTVQEGK 1043>XP_005262921 Length = 1309 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LTLQQGK 9 LT+Q+GK Sbjct: 1070 LTVQEGK 1076>XP_005262920 Length = 1347 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LTLQQGK 9 LT+Q+GK Sbjct: 1161 LTVQEGK 1167>XP_005262919 Length = 1383 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LTLQQGK 9 LT+Q+GK Sbjct: 1144 LTVQEGK 1150>XP_005262918 Length = 1400 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LTLQQGK 9 LT+Q+GK Sbjct: 1161 LTVQEGK 1167>XP_003846678 Length = 243 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ALLTLQQGK 9 ALLT Q G+ Sbjct: 96 ALLTSQMGR 104Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ALLTLQQGK 9 ALLT Q G+ Sbjct: 213 ALLTSQMGR 221Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.316 0.131 0.328 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 497,707 Number of extensions: 742 Number of successful extensions: 36 Number of sequences better than 10000.0: 35 Number of HSP's gapped: 36 Number of HSP's successfully gapped: 36 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |