Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004251 19 869 NP_001129525 17 3301 XP_006713560 17 3301 XP_006713559 17 3301 XP_006713558 17 3301 NP_473371 17 4312 NP_055872 16 5631 NP_056392 16 5631 NP_001138997 16 5631 NP_001138995 16 5631 NP_001138994 16 5631 NP_001138993 16 5631 NP_001138992 16 5631 NP_909119 16 5631 NP_057537 16 5631 XP_006719852 16 5631 XP_005266357 16 5631 XP_006719851 16 5631 XP_006719850 16 5631 XP_006719849 16 5631 XP_006719848 16 5631 XP_005266356 16 5631 XP_006719847 16 5631 XP_006719846 16 5631 XP_006719845 16 5631 XP_006719844 16 5631 XP_006719843 16 5631 XP_006719842 16 5631 XP_006714532 16 5631 XP_005265280 16 5631 XP_006713268 16 5631 NP_001129334 16 7355 NP_612424 16 7355 NP_001229379 16 7355 NP_065070 16 7355 NP_036447 16 7355 NP_001275631 16 7355 NP_699169 16 7355 NP_001116362 16 7355 NP_001271225 16 7355 NP_001138874 16 7355 XP_006724185 16 7355 NP_000535 15 9605 NP_061313 15 9605 NP_000531 15 9605 NP_001036188 15 9605 NP_001230925 15 9605 NP_001276972 15 9605 NP_001027 15 9605 NP_071934 15 9605 NP_037477 15 9605 NP_001265623 15 9605 NP_001026884 15 9605 NP_001265624 15 9605 XP_006723382 15 9605 XP_006723381 15 9605 XP_006723380 15 9605 XP_005268062 15 9605 XP_005268061 15 9605>NP_004251 Length = 1208 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ALLSLLQGK 9 ALL+LLQGK Sbjct: 687 ALLTLLQGK 695>NP_001129525 Length = 373 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 ALLSLLQG 8 ALL+LLQG Sbjct: 236 ALLNLLQG 243>XP_006713560 Length = 373 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 ALLSLLQG 8 ALL+LLQG Sbjct: 236 ALLNLLQG 243>XP_006713559 Length = 373 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 ALLSLLQG 8 ALL+LLQG Sbjct: 236 ALLNLLQG 243>XP_006713558 Length = 373 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 ALLSLLQG 8 ALL+LLQG Sbjct: 236 ALLNLLQG 243>NP_473371 Length = 330 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLSLLQGK 9 LLS+L+GK Sbjct: 159 LLSILEGK 166>NP_055872 Length = 4678 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 ALLSLLQGK 9 ALL++LQG+ Sbjct: 228 ALLNVLQGQ 236>NP_056392 Length = 980 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LLSLLQGK 9 LLSLLQ K Sbjct: 348 LLSLLQAK 355>NP_001138997 Length = 983 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LLSLLQGK 9 LLSLLQ K Sbjct: 351 LLSLLQAK 358>NP_001138995 Length = 972 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LLSLLQGK 9 LLSLLQ K Sbjct: 340 LLSLLQAK 347>NP_001138994 Length = 951 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LLSLLQGK 9 LLSLLQ K Sbjct: 319 LLSLLQAK 326>NP_001138993 Length = 980 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LLSLLQGK 9 LLSLLQ K Sbjct: 348 LLSLLQAK 355>NP_001138992 Length = 980 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LLSLLQGK 9 LLSLLQ K Sbjct: 348 LLSLLQAK 355>NP_909119 Length = 715 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLSLLQGK 9 LLSL++GK Sbjct: 350 LLSLVEGK 357>NP_057537 Length = 722 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLSLLQGK 9 LLSL++GK Sbjct: 357 LLSLVEGK 364>XP_006719852 Length = 4752 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 ALLSLLQGK 9 ALL++LQG+ Sbjct: 228 ALLNVLQGQ 236>XP_005266357 Length = 4600 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 ALLSLLQGK 9 ALL++LQG+ Sbjct: 228 ALLNVLQGQ 236>XP_006719851 Length = 4689 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 ALLSLLQGK 9 ALL++LQG+ Sbjct: 228 ALLNVLQGQ 236>XP_006719850 Length = 4697 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 ALLSLLQGK 9 ALL++LQG+ Sbjct: 228 ALLNVLQGQ 236>XP_006719849 Length = 4703 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 ALLSLLQGK 9 ALL++LQG+ Sbjct: 228 ALLNVLQGQ 236>XP_006719848 Length = 4737 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 ALLSLLQGK 9 ALL++LQG+ Sbjct: 228 ALLNVLQGQ 236>XP_005266356 Length = 4755 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 ALLSLLQGK 9 ALL++LQG+ Sbjct: 228 ALLNVLQGQ 236>XP_006719847 Length = 4761 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 ALLSLLQGK 9 ALL++LQG+ Sbjct: 228 ALLNVLQGQ 236>XP_006719846 Length = 4763 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 ALLSLLQGK 9 ALL++LQG+ Sbjct: 228 ALLNVLQGQ 236>XP_006719845 Length = 4772 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 ALLSLLQGK 9 ALL++LQG+ Sbjct: 228 ALLNVLQGQ 236>XP_006719844 Length = 4789 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 ALLSLLQGK 9 ALL++LQG+ Sbjct: 228 ALLNVLQGQ 236>XP_006719843 Length = 4794 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 ALLSLLQGK 9 ALL++LQG+ Sbjct: 228 ALLNVLQGQ 236>XP_006719842 Length = 4797 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 ALLSLLQGK 9 ALL++LQG+ Sbjct: 228 ALLNVLQGQ 236>XP_006714532 Length = 980 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LLSLLQGK 9 LLSLLQ K Sbjct: 348 LLSLLQAK 355>XP_005265280 Length = 644 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLSLLQGK 9 LLSL++GK Sbjct: 279 LLSLVEGK 286>XP_006713268 Length = 695 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLSLLQGK 9 LLSL++GK Sbjct: 357 LLSLVEGK 364>NP_001129334 Length = 489 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALLSLLQGK 9 ALL L+QG+ Sbjct: 442 ALLRLIQGE 450>NP_612424 Length = 531 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALLSLLQGK 9 ALL L+QG+ Sbjct: 484 ALLRLIQGE 492>NP_001229379 Length = 477 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALLSLLQGK 9 ALL L+QG+ Sbjct: 430 ALLRLIQGE 438>NP_065070 Length = 1429 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ALLSLLQGK 9 A SLLQGK Sbjct: 13 AQTSLLQGK 21>NP_036447 Length = 250 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 ALLSLLQG 8 ALLSLL G Sbjct: 8 ALLSLLAG 15>NP_001275631 Length = 499 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 ALLSLLQG 8 ALLSLL G Sbjct: 279 ALLSLLAG 286>NP_699169 Length = 461 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 ALLSLLQG 8 ALLSLL G Sbjct: 241 ALLSLLAG 248>NP_001116362 Length = 493 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 ALLSLLQG 8 ALLSLL G Sbjct: 273 ALLSLLAG 280>NP_001271225 Length = 327 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALLSLLQGK 9 ALL L+QG+ Sbjct: 280 ALLRLIQGE 288>NP_001138874 Length = 922 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LSLLQGK 9 LSLL+GK Sbjct: 745 LSLLEGK 751>XP_006724185 Length = 489 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALLSLLQGK 9 ALL L+QG+ Sbjct: 442 ALLRLIQGE 450>NP_000535 Length = 703 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 ALLSLLQG 8 ALL LLQG Sbjct: 18 ALLWLLQG 25>NP_061313 Length = 653 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 ALLSLLQG 8 ALL LLQG Sbjct: 18 ALLWLLQG 25>NP_000531 Length = 5038 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLSLLQG 8 LLSLL+G Sbjct: 4026 LLSLLEG 4032>NP_001036188 Length = 5033 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLSLLQG 8 LLSLL+G Sbjct: 4021 LLSLLEG 4027>NP_001230925 Length = 4865 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLSLLQG 8 LLSLL+G Sbjct: 3873 LLSLLEG 3879>NP_001276972 Length = 686 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 ALLSLLQG 8 ALL LLQG Sbjct: 18 ALLWLLQG 25>NP_001027 Length = 4870 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLSLLQG 8 LLSLL+G Sbjct: 3878 LLSLLEG 3884>NP_071934 Length = 1249 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLSLLQG 8 LLS+LQG Sbjct: 291 LLSVLQG 297>NP_037477 Length = 380 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ALLSLLQG 8 ALL +LQG Sbjct: 67 ALLQVLQG 74>NP_001265623 Length = 380 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ALLSLLQG 8 ALL +LQG Sbjct: 67 ALLQVLQG 74>NP_001026884 Length = 1240 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLSLLQG 8 LLS+LQG Sbjct: 291 LLSVLQG 297>NP_001265624 Length = 371 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ALLSLLQG 8 ALL +LQG Sbjct: 58 ALLQVLQG 65>XP_006723382 Length = 5027 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLSLLQG 8 LLSLL+G Sbjct: 4015 LLSLLEG 4021>XP_006723381 Length = 5031 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLSLLQG 8 LLSLL+G Sbjct: 4019 LLSLLEG 4025>XP_006723380 Length = 5032 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLSLLQG 8 LLSLL+G Sbjct: 4020 LLSLLEG 4026>XP_005268062 Length = 1272 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLSLLQG 8 LLS+LQG Sbjct: 323 LLSVLQG 329>XP_005268061 Length = 1281 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLSLLQG 8 LLS+LQG Sbjct: 323 LLSVLQG 329Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.320 0.138 0.338 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 418,455 Number of extensions: 786 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |