Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 19 665 NP_671714 19 665 XP_006715890 19 665 XP_005250160 19 665 XP_005250159 19 665 NP_001367 17 3301 NP_619635 17 3301 NP_056372 17 4312 NP_005843 17 4312 NP_001005273 17 4312 NP_001264 17 4312 XP_006721493 17 4312 XP_006721492 17 4312 XP_006721491 17 4312 XP_006721490 17 4312 XP_006721489 17 4312 XP_006721488 17 4312 XP_005256486 17 4312 XP_005256485 17 4312 XP_006721487 17 4312 XP_006721486 17 4312 XP_005256484 17 4312 XP_006719025 17 4312 XP_005253725 17 4312 XP_006719024 17 4312 XP_006719023 17 4312 XP_006719022 17 4312 XP_006719021 17 4312 NP_001005271 17 4312 NP_001138818 16 5631 NP_001013012 16 5631 XP_005257123 16 5631 XP_005252043 16 5631 NP_004332 16 7355 XP_005264615 16 7355 XP_006712164 16 7355 XP_005264614 16 7355 XP_005264613 16 7355 XP_005264612 16 7355 XP_005276104 16 7355 NP_065194 15 9605 NP_849172 15 9605 NP_001073866 15 9605 NP_001273358 15 9605 NP_660333 15 9605 NP_001182474 15 9605 NP_848599 15 9605 NP_071325 15 9605 NP_998778 15 9605 NP_003732 15 9605 XP_005248194 15 9605 XP_006713920 15 9605 XP_006713919 15 9605 XP_005247908 15 9605 XP_005247907 15 9605 XP_005247906 15 9605 XP_005247905 15 9605 XP_006713081 15 9605>NP_005742 Length = 3907 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ALLARMGG 8 ALLARMGG Sbjct: 3738 ALLARMGG 3745>NP_671714 Length = 3899 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ALLARMGG 8 ALLARMGG Sbjct: 3730 ALLARMGG 3737>XP_006715890 Length = 3860 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ALLARMGG 8 ALLARMGG Sbjct: 3691 ALLARMGG 3698>XP_005250160 Length = 3939 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ALLARMGG 8 ALLARMGG Sbjct: 3770 ALLARMGG 3777>XP_005250159 Length = 3952 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ALLARMGG 8 ALLARMGG Sbjct: 3783 ALLARMGG 3790>NP_001367 Length = 4646 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ALLARMGGS 9 AL AR+GGS Sbjct: 1895 ALEARLGGS 1903>NP_619635 Length = 1043 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLARMGGS 9 +LAR+GGS Sbjct: 29 VLARLGGS 36>NP_056372 Length = 1954 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLARMGGS 9 LLAR+GG+ Sbjct: 1411 LLARVGGN 1418>NP_005843 Length = 1966 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLARMGGS 9 LLAR+GG+ Sbjct: 1399 LLARVGGN 1406>NP_001005273 Length = 2000 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLARMGGS 9 LLAR+GG+ Sbjct: 1399 LLARVGGN 1406>NP_001264 Length = 1912 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLARMGGS 9 LLAR+GG+ Sbjct: 1403 LLARVGGN 1410>XP_006721493 Length = 2056 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLARMGGS 9 LLAR+GG+ Sbjct: 1454 LLARVGGN 1461>XP_006721492 Length = 1924 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLARMGGS 9 LLAR+GG+ Sbjct: 1458 LLARVGGN 1465>XP_006721491 Length = 2025 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLARMGGS 9 LLAR+GG+ Sbjct: 1458 LLARVGGN 1465>XP_006721490 Length = 2036 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLARMGGS 9 LLAR+GG+ Sbjct: 1379 LLARVGGN 1386>XP_006721489 Length = 2045 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLARMGGS 9 LLAR+GG+ Sbjct: 1458 LLARVGGN 1465>XP_006721488 Length = 2056 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLARMGGS 9 LLAR+GG+ Sbjct: 1399 LLARVGGN 1406>XP_005256486 Length = 2060 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLARMGGS 9 LLAR+GG+ Sbjct: 1458 LLARVGGN 1465>XP_005256485 Length = 2080 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLARMGGS 9 LLAR+GG+ Sbjct: 1458 LLARVGGN 1465>XP_006721487 Length = 2111 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLARMGGS 9 LLAR+GG+ Sbjct: 1454 LLARVGGN 1461>XP_006721486 Length = 2114 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLARMGGS 9 LLAR+GG+ Sbjct: 1458 LLARVGGN 1465>XP_005256484 Length = 2115 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLARMGGS 9 LLAR+GG+ Sbjct: 1458 LLARVGGN 1465>XP_006719025 Length = 1902 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLARMGGS 9 LLAR+GG+ Sbjct: 1390 LLARVGGN 1397>XP_005253725 Length = 1905 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLARMGGS 9 LLAR+GG+ Sbjct: 1396 LLARVGGN 1403>XP_006719024 Length = 1908 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLARMGGS 9 LLAR+GG+ Sbjct: 1396 LLARVGGN 1403>XP_006719023 Length = 1914 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLARMGGS 9 LLAR+GG+ Sbjct: 1402 LLARVGGN 1409>XP_006719022 Length = 1915 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLARMGGS 9 LLAR+GG+ Sbjct: 1403 LLARVGGN 1410>XP_006719021 Length = 1940 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLARMGGS 9 LLAR+GG+ Sbjct: 1431 LLARVGGN 1438>NP_001005271 Length = 2059 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLARMGGS 9 LLAR+GG+ Sbjct: 1458 LLARVGGN 1465>NP_001138818 Length = 1067 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LARMGGS 9 LAR+GGS Sbjct: 213 LARIGGS 219>NP_001013012 Length = 437 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ALLARMGGS 9 ALL RMG S Sbjct: 217 ALLTRMGES 225>XP_005257123 Length = 803 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ARMGGS 9 ARMGGS Sbjct: 209 ARMGGS 214>XP_005252043 Length = 333 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ALLARMGGS 9 ALL RMG S Sbjct: 113 ALLTRMGES 121>NP_004332 Length = 2225 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ALLARMGGS 9 A +AR+GG+ Sbjct: 1982 AAMARLGGA 1990>XP_005264615 Length = 2162 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ALLARMGGS 9 A +AR+GG+ Sbjct: 1919 AAMARLGGA 1927>XP_006712164 Length = 2179 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ALLARMGGS 9 A +AR+GG+ Sbjct: 1936 AAMARLGGA 1944>XP_005264614 Length = 2191 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ALLARMGGS 9 A +AR+GG+ Sbjct: 1948 AAMARLGGA 1956>XP_005264613 Length = 2208 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ALLARMGGS 9 A +AR+GG+ Sbjct: 1965 AAMARLGGA 1973>XP_005264612 Length = 2242 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ALLARMGGS 9 A +AR+GG+ Sbjct: 1999 AAMARLGGA 2007>XP_005276104 Length = 338 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ALLARMGGS 9 ALL R GG+ Sbjct: 131 ALLLRFGGA 139>NP_065194 Length = 1819 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ALLARMGGS 9 ALL+ M GS Sbjct: 1652 ALLSHMAGS 1660>NP_849172 Length = 1065 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ALLARMGG 8 ALL+++GG Sbjct: 69 ALLSKVGG 76>NP_001073866 Length = 782 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ALLARMGG 8 ALLA +GG Sbjct: 269 ALLAGLGG 276>NP_001273358 Length = 658 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ALLARMGG 8 A+LAR GG Sbjct: 16 AVLARPGG 23>NP_660333 Length = 1321 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ALLARMGG 8 ALLA +GG Sbjct: 23 ALLALLGG 30>NP_001182474 Length = 275 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 ALLARMGG 8 ALL MGG Sbjct: 224 ALLVTMGG 231>NP_848599 Length = 3092 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ALLARMGGS 9 ALL +GGS Sbjct: 2253 ALLVGLGGS 2261>NP_071325 Length = 701 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ALLARMG 7 ALLAR+G Sbjct: 511 ALLARIG 517>NP_998778 Length = 701 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ALLARMG 7 ALLAR+G Sbjct: 511 ALLARIG 517>NP_003732 Length = 955 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLARMGGS 9 LLA +GGS Sbjct: 570 LLAGLGGS 577>XP_005248194 Length = 833 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ALLARMGG 8 ALLA +GG Sbjct: 23 ALLALLGG 30>XP_006713920 Length = 701 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ALLARMG 7 ALLAR+G Sbjct: 511 ALLARIG 517>XP_006713919 Length = 701 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ALLARMG 7 ALLAR+G Sbjct: 511 ALLARIG 517>XP_005247908 Length = 894 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLARMGGS 9 LLA +GGS Sbjct: 597 LLAGLGGS 604>XP_005247907 Length = 954 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLARMGGS 9 LLA +GGS Sbjct: 570 LLAGLGGS 577>XP_005247906 Length = 981 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLARMGGS 9 LLA +GGS Sbjct: 597 LLAGLGGS 604>XP_005247905 Length = 982 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLARMGGS 9 LLA +GGS Sbjct: 597 LLAGLGGS 604>XP_006713081 Length = 3964 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ALLARMGGS 9 ALL +GGS Sbjct: 2276 ALLVGLGGS 2284Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.323 0.135 0.363 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 517,401 Number of extensions: 656 Number of successful extensions: 58 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 58 Number of HSP's successfully gapped: 58 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |