Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006715 18 1482 NP_005913 18 1482 XP_005267046 18 1482 XP_005267045 18 1482 NP_076427 17 2528 NP_001077393 17 2528 XP_005273316 17 2528 XP_006711593 17 2528 NP_008922 17 4312 NP_001020026 17 4312 XP_005264840 17 4312 NP_001074008 16 5631 XP_005247844 16 5631 XP_006712502 16 5631 XP_006712501 16 5631 NP_079094 16 5631 NP_938143 16 5631 NP_001182156 16 7355 NP_060106 16 7355 NP_079535 16 7355 NP_751898 16 7355 NP_002432 16 7355 NP_751897 16 7355 NP_001078896 16 7355 NP_588614 16 7355 NP_001078894 16 7355 NP_001078897 16 7355 NP_000478 16 7355 NP_001078895 16 7355 XP_006724477 16 7355 XP_005259075 16 7355 XP_005259074 16 7355 XP_006723312 16 7355 NP_004951 15 9605 NP_001164408 15 9605 NP_001164105 15 9605 NP_004121 15 9605 NP_001171649 15 9605 NP_631961 15 9605 XP_005255290 15 9605 NP_003478 15 9605>NP_006715 Length = 1558 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALKQMGLIK 9 ALKQMGL K Sbjct: 533 ALKQMGLRK 541>NP_005913 Length = 1608 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALKQMGLIK 9 ALKQMGL K Sbjct: 533 ALKQMGLRK 541>XP_005267046 Length = 1554 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALKQMGLIK 9 ALKQMGL K Sbjct: 533 ALKQMGLRK 541>XP_005267045 Length = 1604 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALKQMGLIK 9 ALKQMGL K Sbjct: 533 ALKQMGLRK 541>NP_076427 Length = 601 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 ALKQMGLIK 9 ALK++GL+K Sbjct: 592 ALKKLGLLK 600>NP_001077393 Length = 355 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 ALKQMGLIK 9 ALK++GL+K Sbjct: 346 ALKKLGLLK 354>XP_005273316 Length = 355 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 ALKQMGLIK 9 ALK++GL+K Sbjct: 346 ALKKLGLLK 354>XP_006711593 Length = 601 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 ALKQMGLIK 9 ALK++GL+K Sbjct: 592 ALKKLGLLK 600>NP_008922 Length = 1029 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALKQMGLIK 9 AL+Q GL+K Sbjct: 10 ALRQEGLVK 18>NP_001020026 Length = 267 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALKQMGLIK 9 AL+Q GL+K Sbjct: 10 ALRQEGLVK 18>XP_005264840 Length = 1029 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALKQMGLIK 9 AL+Q GL+K Sbjct: 10 ALRQEGLVK 18>NP_001074008 Length = 1101 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LKQMGLIK 9 LKQM LIK Sbjct: 923 LKQMELIK 930>XP_005247844 Length = 348 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ALKQMGLI 8 ALK+MG++ Sbjct: 2 ALKRMGIV 9>XP_006712502 Length = 588 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LKQMGLIK 9 LKQM LIK Sbjct: 410 LKQMELIK 417>XP_006712501 Length = 1080 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LKQMGLIK 9 LKQM LIK Sbjct: 902 LKQMELIK 909>NP_079094 Length = 404 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ALKQMGLI 8 ALK+MG++ Sbjct: 58 ALKRMGIV 65>NP_938143 Length = 348 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ALKQMGLI 8 ALK+MG++ Sbjct: 2 ALKRMGIV 9>NP_001182156 Length = 1069 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALKQMGLIK 9 ALKQ+G I+ Sbjct: 1013 ALKQLGHIR 1021>NP_060106 Length = 1214 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALKQMGLIK 9 ALKQ+G I+ Sbjct: 1158 ALKQLGHIR 1166>NP_079535 Length = 822 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LKQMGLI 8 LKQ+GLI Sbjct: 619 LKQVGLI 625>NP_751898 Length = 834 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LKQMGLI 8 LKQ+GLI Sbjct: 602 LKQVGLI 608>NP_002432 Length = 834 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LKQMGLI 8 LKQ+GLI Sbjct: 602 LKQVGLI 608>NP_751897 Length = 835 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LKQMGLI 8 LKQ+GLI Sbjct: 602 LKQVGLI 608>NP_001078896 Length = 509 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALKQMGLIK 9 ALKQ+ L+K Sbjct: 457 ALKQLQLLK 465>NP_588614 Length = 789 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ALKQMGL 7 ALK+MGL Sbjct: 50 ALKKMGL 56>NP_001078894 Length = 509 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALKQMGLIK 9 ALKQ+ L+K Sbjct: 457 ALKQLQLLK 465>NP_001078897 Length = 423 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALKQMGLIK 9 ALKQ+ L+K Sbjct: 371 ALKQLQLLK 379>NP_000478 Length = 509 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALKQMGLIK 9 ALKQ+ L+K Sbjct: 457 ALKQLQLLK 465>NP_001078895 Length = 509 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALKQMGLIK 9 ALKQ+ L+K Sbjct: 457 ALKQLQLLK 465>XP_006724477 Length = 488 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALKQMGLIK 9 ALKQ+ L+K Sbjct: 436 ALKQLQLLK 444>XP_005259075 Length = 678 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALKQMGLIK 9 ALKQ+G I+ Sbjct: 622 ALKQLGHIR 630>XP_005259074 Length = 785 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALKQMGLIK 9 ALKQ+G I+ Sbjct: 729 ALKQLGHIR 737>XP_006723312 Length = 1129 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALKQMGLIK 9 ALKQ+G I+ Sbjct: 1073 ALKQLGHIR 1081>NP_004951 Length = 526 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KQMGLIK 9 KQ+G+IK Sbjct: 306 KQIGIIK 312>NP_001164408 Length = 522 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KQMGLIK 9 KQ+G+IK Sbjct: 302 KQIGIIK 308>NP_001164105 Length = 525 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KQMGLIK 9 KQ+G+IK Sbjct: 305 KQIGIIK 311>NP_004121 Length = 350 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LKQMGLIK 9 L+Q GL+K Sbjct: 261 LQQFGLVK 268>NP_001171649 Length = 333 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LKQMGLIK 9 L+Q GL+K Sbjct: 261 LQQFGLVK 268>NP_631961 Length = 592 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KQMGLIK 9 KQ+G+IK Sbjct: 255 KQIGIIK 261>XP_005255290 Length = 321 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KQMGLIK 9 KQ+G+IK Sbjct: 101 KQIGIIK 107>NP_003478 Length = 589 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KQMGLIK 9 KQ+G+IK Sbjct: 252 KQIGIIK 258Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.326 0.140 0.353 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 424,494 Number of extensions: 640 Number of successful extensions: 41 Number of sequences better than 10000.0: 41 Number of HSP's gapped: 41 Number of HSP's successfully gapped: 41 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |