Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000258 19 869 NP_001035957 19 869 XP_005276506 19 869 XP_006721991 19 869 XP_006721990 19 869 XP_006721989 19 869 XP_005258041 19 869 XP_006721988 19 869 XP_006721987 19 869 XP_006721986 19 869 XP_005258040 19 869 XP_006721985 19 869 XP_006720412 19 869 NP_000758 18 1935 XP_006723114 18 1935 XP_005258626 18 1935 XP_006723113 18 1935 NP_001135920 17 3301 NP_001135921 17 3301 XP_006721159 17 3301 XP_005255675 17 3301 NP_001135923 17 3301 NP_114427 17 3301 NP_001135922 17 3301 NP_001004684 17 3301 NP_001004688 17 4312 NP_001004691 17 4312 NP_001004712 17 4312 NP_001004689 17 4312 NP_001005226 16 5631 NP_036499 16 5631 NP_065805 16 7355 NP_001118230 16 7355 XP_006721512 16 7355 XP_006721511 16 7355 XP_005247728 16 7355 XP_006713777 16 7355 NP_001004701 16 7355 NP_001004742 15 9605 XP_006723772 15 9605 NP_542790 15 9605 NP_001005480 15 9605 NP_001004059 15 9605 NP_001004727 15 9605 NP_001005282 15 9605 NP_001004700 15 9605 NP_001004743 15 9605>NP_000258 Length = 2818 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALKMLSIFY 9 ALK LSIFY Sbjct: 1565 ALKTLSIFY 1573>NP_001035957 Length = 2839 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALKMLSIFY 9 ALK LSIFY Sbjct: 1586 ALKTLSIFY 1594>XP_005276506 Length = 151 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALKMLSIFY 9 ALK LSIFY Sbjct: 110 ALKTLSIFY 118>XP_006721991 Length = 1632 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALKMLSIFY 9 ALK LSIFY Sbjct: 1596 ALKTLSIFY 1604>XP_006721990 Length = 2823 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALKMLSIFY 9 ALK LSIFY Sbjct: 1596 ALKTLSIFY 1604>XP_006721989 Length = 2823 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALKMLSIFY 9 ALK LSIFY Sbjct: 1596 ALKTLSIFY 1604>XP_005258041 Length = 2836 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALKMLSIFY 9 ALK LSIFY Sbjct: 1565 ALKTLSIFY 1573>XP_006721988 Length = 2846 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALKMLSIFY 9 ALK LSIFY Sbjct: 1575 ALKTLSIFY 1583>XP_006721987 Length = 2849 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALKMLSIFY 9 ALK LSIFY Sbjct: 1596 ALKTLSIFY 1604>XP_006721986 Length = 2854 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALKMLSIFY 9 ALK LSIFY Sbjct: 1583 ALKTLSIFY 1591>XP_005258040 Length = 2857 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALKMLSIFY 9 ALK LSIFY Sbjct: 1586 ALKTLSIFY 1594>XP_006721985 Length = 2867 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALKMLSIFY 9 ALK LSIFY Sbjct: 1596 ALKTLSIFY 1604>XP_006720412 Length = 128 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALKMLSIFY 9 ALK LSIFY Sbjct: 87 ALKTLSIFY 95>NP_000758 Length = 491 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LKMLSIFY 9 LKML++FY Sbjct: 196 LKMLNLFY 203>XP_006723114 Length = 386 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LKMLSIFY 9 LKML++FY Sbjct: 196 LKMLNLFY 203>XP_005258626 Length = 422 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LKMLSIFY 9 LKML++FY Sbjct: 196 LKMLNLFY 203>XP_006723113 Length = 457 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LKMLSIFY 9 LKML++FY Sbjct: 196 LKMLNLFY 203>NP_001135920 Length = 528 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KMLSIFY 9 +MLSIFY Sbjct: 186 RMLSIFY 192>NP_001135921 Length = 454 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KMLSIFY 9 +MLSIFY Sbjct: 164 RMLSIFY 170>XP_006721159 Length = 521 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KMLSIFY 9 +MLSIFY Sbjct: 231 RMLSIFY 237>XP_005255675 Length = 573 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KMLSIFY 9 +MLSIFY Sbjct: 231 RMLSIFY 237>NP_001135923 Length = 476 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KMLSIFY 9 +MLSIFY Sbjct: 186 RMLSIFY 192>NP_114427 Length = 528 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KMLSIFY 9 +MLSIFY Sbjct: 186 RMLSIFY 192>NP_001135922 Length = 455 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KMLSIFY 9 +MLSIFY Sbjct: 113 RMLSIFY 119>NP_001004684 Length = 330 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KMLSIFY 9 KM+S+FY Sbjct: 288 KMISVFY 294>NP_001004688 Length = 347 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KMLSIFY 9 KM+S+FY Sbjct: 272 KMVSVFY 278>NP_001004691 Length = 312 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KMLSIFY 9 KM+S+FY Sbjct: 272 KMVSVFY 278>NP_001004712 Length = 310 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KMLSIFY 9 K+LS+FY Sbjct: 270 KLLSVFY 276>NP_001004689 Length = 312 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KMLSIFY 9 KM+S+FY Sbjct: 272 KMVSVFY 278>NP_001005226 Length = 313 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KMLSIFY 9 KM+S+FY Sbjct: 272 KMVSLFY 278>NP_036499 Length = 313 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KMLSIFY 9 KM+S+FY Sbjct: 272 KMVSLFY 278>NP_065805 Length = 1444 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ALKMLSIFY 9 A KML +FY Sbjct: 447 APKMLGMFY 455>NP_001118230 Length = 549 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MLSIFY 9 MLS+FY Sbjct: 230 MLSVFY 235>XP_006721512 Length = 379 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MLSIFY 9 MLS+FY Sbjct: 60 MLSVFY 65>XP_006721511 Length = 398 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MLSIFY 9 MLS+FY Sbjct: 79 MLSVFY 84>XP_005247728 Length = 1413 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ALKMLSIFY 9 A KML +FY Sbjct: 416 APKMLGMFY 424>XP_006713777 Length = 1424 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ALKMLSIFY 9 A KML +FY Sbjct: 427 APKMLGMFY 435>NP_001004701 Length = 310 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 KMLSIFY 9 KM+++FY Sbjct: 267 KMIAVFY 273>NP_001004742 Length = 307 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 KMLSIFY 9 KM+++FY Sbjct: 270 KMVAVFY 276>XP_006723772 Length = 690 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KMLSIF 8 KMLSIF Sbjct: 258 KMLSIF 263>NP_542790 Length = 696 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KMLSIF 8 KMLSIF Sbjct: 264 KMLSIF 269>NP_001005480 Length = 318 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KMLSIFY 9 KMLS+F+ Sbjct: 271 KMLSLFH 277>NP_001004059 Length = 311 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 KMLSIFY 9 KM+++FY Sbjct: 267 KMVAVFY 273>NP_001004727 Length = 303 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 KMLSIFY 9 KM+++FY Sbjct: 261 KMVAVFY 267>NP_001005282 Length = 311 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 KMLSIFY 9 KM+++FY Sbjct: 271 KMVAVFY 277>NP_001004700 Length = 310 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 KMLSIFY 9 KM+++FY Sbjct: 267 KMVAVFY 273>NP_001004743 Length = 310 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 KMLSIFY 9 KM+++FY Sbjct: 270 KMVAVFY 276Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.345 0.149 0.405 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 267,339 Number of extensions: 262 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |