Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_066997 16 5631 NP_054878 16 5631 NP_644814 16 5631 XP_006721859 16 5631 XP_005265151 16 5631 XP_006713183 16 5631 XP_006713182 16 5631 NP_001288 16 7355 NP_001273059 16 7355 XP_006721197 16 7355 NP_116250 15 9605 NP_006280 15 9605 NP_001273497 15 9605 NP_115519 15 9605 NP_001020029 15 9605 NP_001273498 15 9605 NP_006071 15 9605 NP_000338 15 9605 NP_892018 15 9605 XP_005259608 15 9605 XP_006720304 15 9605 XP_005268080 15 9605 XP_006716915 15 9605 XP_005251621 15 9605 XP_006715902 15 9605 XP_006715901 15 9605 XP_005250168 15 9605 XP_005250167 15 9605 XP_006715649 15 9605 XP_006715648 15 9605 XP_005263869 15 9605 XP_005263868 15 9605 XP_006712851 15 9605 XP_005263866 15 9605>NP_066997 Length = 923 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EATTKQE 9 EATT+QE Sbjct: 486 EATTQQE 492>NP_054878 Length = 2564 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALEATTKQE 9 +LEA TKQ+ Sbjct: 249 SLEADTKQD 257>NP_644814 Length = 880 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ALEATTK 7 A+EATTK Sbjct: 442 AIEATTK 448>XP_006721859 Length = 844 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ALEATTK 7 A+EATTK Sbjct: 406 AIEATTK 412>XP_005265151 Length = 2058 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALEATTKQE 9 +LEA TKQ+ Sbjct: 249 SLEADTKQD 257>XP_006713183 Length = 2258 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALEATTKQE 9 +LEA TKQ+ Sbjct: 249 SLEADTKQD 257>XP_006713182 Length = 2422 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALEATTKQE 9 +LEA TKQ+ Sbjct: 249 SLEADTKQD 257>NP_001288 Length = 1251 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ALEATTKQE 9 ALEA KQ+ Sbjct: 1141 ALEAAAKQQ 1149>NP_001273059 Length = 1245 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ALEATTKQE 9 ALEA KQ+ Sbjct: 1135 ALEAAAKQQ 1143>XP_006721197 Length = 1251 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ALEATTKQE 9 ALEA KQ+ Sbjct: 1141 ALEAAAKQQ 1149>NP_116250 Length = 654 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LEATTKQE 9 LEA+TK E Sbjct: 509 LEASTKPE 516>NP_006280 Length = 2541 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ALEATTK 7 ALEATT+ Sbjct: 2145 ALEATTE 2151>NP_001273497 Length = 1077 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ALEATTKQE 9 ALE TKQ+ Sbjct: 814 ALEEITKQQ 822>NP_115519 Length = 1079 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ALEATTKQE 9 ALE TKQ+ Sbjct: 816 ALEEITKQQ 824>NP_001020029 Length = 2328 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LEATTKQE 9 L+ATTK++ Sbjct: 1364 LQATTKEK 1371>NP_001273498 Length = 625 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ALEATTKQE 9 ALE TKQ+ Sbjct: 362 ALEEITKQQ 370>NP_006071 Length = 771 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ALEATTKQE 9 A+E +TKQ+ Sbjct: 491 AMELSTKQQ 499>NP_000338 Length = 2137 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LEATTKQE 9 L+ATTK++ Sbjct: 1364 LQATTKEK 1371>NP_892018 Length = 1059 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LEATTK 7 LEATTK Sbjct: 432 LEATTK 437>XP_005259608 Length = 1093 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LEATTK 7 LEATTK Sbjct: 466 LEATTK 471>XP_006720304 Length = 2328 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LEATTKQE 9 L+ATTK++ Sbjct: 1364 LQATTKEK 1371>XP_005268080 Length = 2328 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LEATTKQE 9 L+ATTK++ Sbjct: 1364 LQATTKEK 1371>XP_006716915 Length = 2542 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ALEATTK 7 ALEATT+ Sbjct: 2145 ALEATTE 2151>XP_005251621 Length = 2542 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ALEATTK 7 ALEATT+ Sbjct: 2145 ALEATTE 2151>XP_006715902 Length = 771 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ALEATTKQE 9 A+E +TKQ+ Sbjct: 491 AMELSTKQQ 499>XP_006715901 Length = 771 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ALEATTKQE 9 A+E +TKQ+ Sbjct: 491 AMELSTKQQ 499>XP_005250168 Length = 771 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ALEATTKQE 9 A+E +TKQ+ Sbjct: 491 AMELSTKQQ 499>XP_005250167 Length = 771 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ALEATTKQE 9 A+E +TKQ+ Sbjct: 491 AMELSTKQQ 499>XP_006715649 Length = 584 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LEATTKQE 9 LEA+TK E Sbjct: 439 LEASTKPE 446>XP_006715648 Length = 616 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LEATTKQE 9 LEA+TK E Sbjct: 471 LEASTKPE 478>XP_005263869 Length = 1019 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ALEATTKQE 9 ALE TKQ+ Sbjct: 756 ALEEITKQQ 764>XP_005263868 Length = 1019 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ALEATTKQE 9 ALE TKQ+ Sbjct: 756 ALEEITKQQ 764>XP_006712851 Length = 1079 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ALEATTKQE 9 ALE TKQ+ Sbjct: 816 ALEEITKQQ 824>XP_005263866 Length = 1079 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ALEATTKQE 9 ALE TKQ+ Sbjct: 816 ALEEITKQQ 824Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.286 0.0997 0.220 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 369,814 Number of extensions: 571 Number of successful extensions: 34 Number of sequences better than 10000.0: 34 Number of HSP's gapped: 34 Number of HSP's successfully gapped: 34 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |