Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001277144 20 390 NP_001277143 20 390 NP_001319 20 390 NP_001012632 20 390 NP_001077383 20 390 NP_001320 20 390 NP_073713 20 390 XP_005269629 20 390 XP_005269628 20 390 XP_005269627 20 390 XP_005269626 20 390 XP_006717706 20 390 XP_005269625 20 390 XP_005269624 20 390 XP_006717705 20 390 XP_005269622 20 390 XP_005269621 20 390 XP_006717704 20 390 XP_005269619 20 390 XP_005269618 20 390 XP_005272320 20 390 XP_005272319 20 390 XP_005272318 20 390 NP_003282 17 3301 XP_005254130 17 3301 XP_005254129 17 3301 XP_005254128 17 3301 XP_005254127 17 3301 NP_001181927 16 7355 NP_055800 16 7355 NP_004806 16 7355 NP_653223 16 7355 NP_006026 16 7355 NP_001258652 16 7355 NP_110420 16 7355 XP_006720500 16 7355 XP_005268287 16 7355 XP_005268286 16 7355 XP_005268285 16 7355 XP_005268284 16 7355 XP_006714860 16 7355 XP_006714859 16 7355 XP_005268570 16 7355 XP_006711111 16 7355 NP_001622 16 7355 NP_073572 15 9605 NP_001139664 15 9605 NP_003310 15 9605 NP_597676 15 9605 NP_596870 15 9605 NP_001243779 15 9605 NP_596869 15 9605 NP_055785 15 9605 NP_055795 15 9605 NP_115633 15 9605 NP_071335 15 9605 XP_005266697 15 9605 XP_005247964 15 9605 XP_006713889 15 9605 XP_006713888 15 9605 XP_006712787 15 9605 XP_006712786 15 9605 XP_005245027 15 9605 NP_001254479 15 9605 NP_597681 15 9605>NP_001277144 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ALDVHESE 8 ALDVHESE Sbjct: 294 ALDVHESE 301>NP_001277143 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ALDVHESE 8 ALDVHESE Sbjct: 294 ALDVHESE 301>NP_001319 Length = 440 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ALDVHESE 8 ALDVHESE Sbjct: 288 ALDVHESE 295>NP_001012632 Length = 429 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ALDVHESE 8 ALDVHESE Sbjct: 277 ALDVHESE 284>NP_001077383 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ALDVHESE 8 ALDVHESE Sbjct: 294 ALDVHESE 301>NP_001320 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ALDVHESE 8 ALDVHESE Sbjct: 294 ALDVHESE 301>NP_073713 Length = 985 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ALDVHESE 8 ALDVHESE Sbjct: 834 ALDVHESE 841>XP_005269629 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ALDVHESE 8 ALDVHESE Sbjct: 294 ALDVHESE 301>XP_005269628 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ALDVHESE 8 ALDVHESE Sbjct: 294 ALDVHESE 301>XP_005269627 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ALDVHESE 8 ALDVHESE Sbjct: 294 ALDVHESE 301>XP_005269626 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ALDVHESE 8 ALDVHESE Sbjct: 294 ALDVHESE 301>XP_006717706 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ALDVHESE 8 ALDVHESE Sbjct: 294 ALDVHESE 301>XP_005269625 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ALDVHESE 8 ALDVHESE Sbjct: 294 ALDVHESE 301>XP_005269624 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ALDVHESE 8 ALDVHESE Sbjct: 294 ALDVHESE 301>XP_006717705 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ALDVHESE 8 ALDVHESE Sbjct: 294 ALDVHESE 301>XP_005269622 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ALDVHESE 8 ALDVHESE Sbjct: 294 ALDVHESE 301>XP_005269621 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ALDVHESE 8 ALDVHESE Sbjct: 294 ALDVHESE 301>XP_006717704 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ALDVHESE 8 ALDVHESE Sbjct: 294 ALDVHESE 301>XP_005269619 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ALDVHESE 8 ALDVHESE Sbjct: 294 ALDVHESE 301>XP_005269618 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ALDVHESE 8 ALDVHESE Sbjct: 294 ALDVHESE 301>XP_005272320 Length = 430 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ALDVHESE 8 ALDVHESE Sbjct: 277 ALDVHESE 284>XP_005272319 Length = 430 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ALDVHESE 8 ALDVHESE Sbjct: 277 ALDVHESE 284>XP_005272318 Length = 441 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ALDVHESE 8 ALDVHESE Sbjct: 288 ALDVHESE 295>NP_003282 Length = 1249 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ALDVHESES 9 +LD+HE+ S Sbjct: 919 SLDIHENHS 927>XP_005254130 Length = 1162 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ALDVHESES 9 +LD+HE+ S Sbjct: 919 SLDIHENHS 927>XP_005254129 Length = 1262 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ALDVHESES 9 +LD+HE+ S Sbjct: 919 SLDIHENHS 927>XP_005254128 Length = 1291 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ALDVHESES 9 +LD+HE+ S Sbjct: 919 SLDIHENHS 927>XP_005254127 Length = 1304 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ALDVHESES 9 +LD+HE+ S Sbjct: 919 SLDIHENHS 927>NP_001181927 Length = 1710 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LDVHESES 9 +D+H SES Sbjct: 344 VDLHHSES 351>NP_055800 Length = 1654 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LDVHESES 9 +D+H SES Sbjct: 344 VDLHHSES 351>NP_004806 Length = 1261 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 DVHESES 9 D+H SES Sbjct: 933 DIHTSES 939>NP_653223 Length = 773 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ALDVHESES 9 A+D+HE+ S Sbjct: 305 AMDLHEAVS 313>NP_006026 Length = 1711 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DVHESES 9 +VH+SES Sbjct: 718 EVHDSES 724>NP_001258652 Length = 943 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ALDVHESES 9 ++ VH+SES Sbjct: 592 SITVHDSES 600>NP_110420 Length = 1113 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ALDVHESES 9 ++ VH+SES Sbjct: 592 SITVHDSES 600>XP_006720500 Length = 1710 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LDVHESES 9 +D+H SES Sbjct: 344 VDLHHSES 351>XP_005268287 Length = 1490 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DVHESES 9 +VH+SES Sbjct: 718 EVHDSES 724>XP_005268286 Length = 1685 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DVHESES 9 +VH+SES Sbjct: 718 EVHDSES 724>XP_005268285 Length = 1702 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DVHESES 9 +VH+SES Sbjct: 718 EVHDSES 724>XP_005268284 Length = 1728 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DVHESES 9 +VH+SES Sbjct: 718 EVHDSES 724>XP_006714860 Length = 1146 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ALDVHESES 9 ++ VH+SES Sbjct: 592 SITVHDSES 600>XP_006714859 Length = 1188 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ALDVHESES 9 ++ VH+SES Sbjct: 592 SITVHDSES 600>XP_005268570 Length = 1188 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ALDVHESES 9 ++ VH+SES Sbjct: 592 SITVHDSES 600>XP_006711111 Length = 1197 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 DVHESES 9 D+H SES Sbjct: 869 DIHTSES 875>NP_001622 Length = 528 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DVHESES 9 DV+ESES Sbjct: 427 DVNESES 433>NP_073572 Length = 528 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ALDVHESES 9 A+ VH SES Sbjct: 442 AVSVHVSES 450>NP_001139664 Length = 255 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LDVHESES 9 LDVHE + Sbjct: 232 LDVHEQST 239>NP_003310 Length = 26926 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ALDVHESES 9 A+D+ ESE+ Sbjct: 1234 AVDISESEA 1242>NP_597676 Length = 27051 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ALDVHESES 9 A+D+ ESE+ Sbjct: 1234 AVDISESEA 1242>NP_596870 Length = 5604 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ALDVHESES 9 A+D+ ESE+ Sbjct: 1280 AVDISESEA 1288>NP_001243779 Length = 34350 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ALDVHESES 9 A+D+ ESE+ Sbjct: 1280 AVDISESEA 1288>NP_596869 Length = 33423 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ALDVHESES 9 A+D+ ESE+ Sbjct: 1280 AVDISESEA 1288>NP_055785 Length = 792 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LDVHESE 8 +DVH SE Sbjct: 18 IDVHPSE 24>NP_055795 Length = 1186 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 LDVHES 7 +D+HES Sbjct: 405 MDIHES 410>NP_115633 Length = 365 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LDVHESES 9 LDVHE + Sbjct: 342 LDVHEQST 349>NP_071335 Length = 531 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 ALDVHE 6 +LDVHE Sbjct: 250 SLDVHE 255>XP_005266697 Length = 1077 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ALDVHESE 8 +LD+ ESE Sbjct: 37 SLDIQESE 44>XP_005247964 Length = 1162 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 LDVHES 7 +D+HES Sbjct: 405 MDIHES 410>XP_006713889 Length = 1186 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 LDVHES 7 +D+HES Sbjct: 405 MDIHES 410>XP_006713888 Length = 1186 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 LDVHES 7 +D+HES Sbjct: 405 MDIHES 410>XP_006712787 Length = 33978 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ALDVHESES 9 A+D+ ESE+ Sbjct: 1281 AVDISESEA 1289>XP_006712786 Length = 35484 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ALDVHESES 9 A+D+ ESE+ Sbjct: 1281 AVDISESEA 1289>XP_005245027 Length = 794 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LDVHESE 8 +DVH SE Sbjct: 18 IDVHPSE 24>NP_001254479 Length = 35991 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ALDVHESES 9 A+D+ ESE+ Sbjct: 1280 AVDISESEA 1288>NP_597681 Length = 27118 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ALDVHESES 9 A+D+ ESE+ Sbjct: 1234 AVDISESEA 1242Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.294 0.112 0.274 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 655,143 Number of extensions: 870 Number of successful extensions: 65 Number of sequences better than 10000.0: 65 Number of HSP's gapped: 65 Number of HSP's successfully gapped: 65 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.0 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |