Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_443179 20 509 XP_005266703 20 509 NP_056169 17 2528 NP_689846 17 4312 NP_001018123 17 4312 NP_061830 17 4312 NP_001252516 16 7355 NP_775960 16 7355 NP_008877 16 7355 NP_056382 16 7355 NP_066022 16 7355 NP_003119 16 7355 XP_006723369 16 7355 XP_005254096 16 7355 XP_005254095 16 7355 XP_005274250 16 7355 XP_006718734 16 7355 XP_006718733 16 7355 XP_005274249 16 7355 XP_006712150 16 7355 XP_005264574 16 7355 NP_004760 15 9605 NP_064717 15 9605 NP_064718 15 9605 NP_001020029 15 9605 NP_851825 15 9605 NP_001229347 15 9605 NP_001229346 15 9605 NP_001229345 15 9605 NP_000338 15 9605 NP_653175 15 9605 NP_851808 15 9605 XP_006720376 15 9605 XP_006720375 15 9605 XP_006720374 15 9605 XP_006720373 15 9605 XP_006720372 15 9605 XP_006720371 15 9605 XP_006720370 15 9605 XP_006720369 15 9605 XP_006720304 15 9605 XP_005268080 15 9605>NP_443179 Length = 2170 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALADRRESH 9 ALAD RESH Sbjct: 1306 ALADSRESH 1314>XP_005266703 Length = 1501 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALADRRESH 9 ALAD RESH Sbjct: 637 ALADSRESH 645>NP_056169 Length = 1749 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ALADRRESH 9 AL DRRE H Sbjct: 286 ALDDRRELH 294>NP_689846 Length = 859 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ALADRRES 8 AL+DRRE+ Sbjct: 801 ALSDRREN 808>NP_001018123 Length = 859 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ALADRRES 8 AL+DRRE+ Sbjct: 801 ALSDRREN 808>NP_061830 Length = 701 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALADRRESH 9 ALA+ RE+H Sbjct: 248 ALAELRENH 256>NP_001252516 Length = 157 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 DRRESH 9 D+RESH Sbjct: 63 DQRESH 68>NP_775960 Length = 1285 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LADRRESH 9 LADR E H Sbjct: 126 LADRYECH 133>NP_008877 Length = 2390 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ALADRRES 8 ALAD RE+ Sbjct: 50 ALADEREA 57>NP_056382 Length = 958 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 DRRESH 9 +RRESH Sbjct: 821 ERRESH 826>NP_066022 Length = 2564 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ALADRRES 8 ALAD RE+ Sbjct: 54 ALADEREA 61>NP_003119 Length = 2364 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ALADRRES 8 ALAD RE+ Sbjct: 47 ALADEREA 54>XP_006723369 Length = 2394 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ALADRRES 8 ALAD RE+ Sbjct: 54 ALADEREA 61>XP_005254096 Length = 958 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 DRRESH 9 +RRESH Sbjct: 821 ERRESH 826>XP_005254095 Length = 958 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 DRRESH 9 +RRESH Sbjct: 821 ERRESH 826>XP_005274250 Length = 2390 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ALADRRES 8 ALAD RE+ Sbjct: 50 ALADEREA 57>XP_006718734 Length = 2390 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ALADRRES 8 ALAD RE+ Sbjct: 50 ALADEREA 57>XP_006718733 Length = 2390 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ALADRRES 8 ALAD RE+ Sbjct: 50 ALADEREA 57>XP_005274249 Length = 2390 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ALADRRES 8 ALAD RE+ Sbjct: 50 ALADEREA 57>XP_006712150 Length = 2364 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ALADRRES 8 ALAD RE+ Sbjct: 47 ALADEREA 54>XP_005264574 Length = 2364 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ALADRRES 8 ALAD RE+ Sbjct: 47 ALADEREA 54>NP_004760 Length = 531 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 DRRESH 9 D RESH Sbjct: 77 DERESH 82>NP_064717 Length = 549 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 DRRESH 9 D RESH Sbjct: 77 DERESH 82>NP_064718 Length = 543 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 DRRESH 9 D RESH Sbjct: 77 DERESH 82>NP_001020029 Length = 2328 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ALADRRE 7 ALAD RE Sbjct: 47 ALADERE 53>NP_851825 Length = 508 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ALADRRESH 9 +L DR+E H Sbjct: 404 SLHDRKERH 412>NP_001229347 Length = 581 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ALADRRESH 9 +L DR+E H Sbjct: 477 SLHDRKERH 485>NP_001229346 Length = 600 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ALADRRESH 9 +L DR+E H Sbjct: 496 SLHDRKERH 504>NP_001229345 Length = 520 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ALADRRESH 9 +L DR+E H Sbjct: 404 SLHDRKERH 412>NP_000338 Length = 2137 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ALADRRE 7 ALAD RE Sbjct: 47 ALADERE 53>NP_653175 Length = 569 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ALADRRESH 9 +L DR+E H Sbjct: 465 SLHDRKERH 473>NP_851808 Length = 581 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ALADRRESH 9 +L DR+E H Sbjct: 465 SLHDRKERH 473>XP_006720376 Length = 334 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ALADRRESH 9 +L DR+E H Sbjct: 208 SLHDRKERH 216>XP_006720375 Length = 334 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ALADRRESH 9 +L DR+E H Sbjct: 208 SLHDRKERH 216>XP_006720374 Length = 418 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ALADRRESH 9 +L DR+E H Sbjct: 292 SLHDRKERH 300>XP_006720373 Length = 418 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ALADRRESH 9 +L DR+E H Sbjct: 292 SLHDRKERH 300>XP_006720372 Length = 418 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ALADRRESH 9 +L DR+E H Sbjct: 292 SLHDRKERH 300>XP_006720371 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ALADRRESH 9 +L DR+E H Sbjct: 404 SLHDRKERH 412>XP_006720370 Length = 584 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ALADRRESH 9 +L DR+E H Sbjct: 465 SLHDRKERH 473>XP_006720369 Length = 591 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ALADRRESH 9 +L DR+E H Sbjct: 465 SLHDRKERH 473>XP_006720304 Length = 2328 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ALADRRE 7 ALAD RE Sbjct: 47 ALADERE 53>XP_005268080 Length = 2328 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ALADRRE 7 ALAD RE Sbjct: 47 ALADERE 53Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.316 0.123 0.333 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 526,730 Number of extensions: 915 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |