Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_444256 21 229 NP_444254 21 229 NP_444253 21 229 NP_444255 21 229 XP_005247551 21 229 XP_005247550 21 229 XP_006713712 21 229 XP_005247549 21 229 NP_000095 18 1935 NP_005957 17 4312 XP_005246644 17 4312 XP_005246643 17 4312 XP_005246642 17 4312 XP_005246641 17 4312 XP_005246640 17 4312 XP_005246638 17 4312 XP_005246639 17 4312 XP_005246636 17 4312 XP_005246637 17 4312 XP_006712603 17 4312 NP_001008844 15 9605 NP_004406 15 9605 NP_067047 15 9605 NP_065689 15 9605 XP_006717280 15 9605 XP_006717279 15 9605 XP_006717278 15 9605 XP_006717277 15 9605 XP_006717276 15 9605 XP_006717275 15 9605 XP_006717274 15 9605 XP_006717273 15 9605 XP_006717272 15 9605>NP_444256 Length = 1794 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AKQMDFRAN 9 A+QMDFRAN Sbjct: 851 AEQMDFRAN 859>NP_444254 Length = 1845 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AKQMDFRAN 9 A+QMDFRAN Sbjct: 851 AEQMDFRAN 859>NP_444253 Length = 1914 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AKQMDFRAN 9 A+QMDFRAN Sbjct: 920 AEQMDFRAN 928>NP_444255 Length = 1863 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AKQMDFRAN 9 A+QMDFRAN Sbjct: 920 AEQMDFRAN 928>XP_005247551 Length = 1855 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AKQMDFRAN 9 A+QMDFRAN Sbjct: 861 AEQMDFRAN 869>XP_005247550 Length = 1856 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AKQMDFRAN 9 A+QMDFRAN Sbjct: 930 AEQMDFRAN 938>XP_006713712 Length = 1923 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AKQMDFRAN 9 A+QMDFRAN Sbjct: 930 AEQMDFRAN 938>XP_005247549 Length = 1924 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AKQMDFRAN 9 A+QMDFRAN Sbjct: 930 AEQMDFRAN 938>NP_000095 Length = 543 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 AKQMDFRAN 9 A Q DFRAN Sbjct: 488 AHQCDFRAN 496>NP_005957 Length = 487 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AKQMDFRAN 9 AKQM+F N Sbjct: 372 AKQMEFLCN 380>XP_005246644 Length = 457 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AKQMDFRAN 9 AKQM+F N Sbjct: 342 AKQMEFLCN 350>XP_005246643 Length = 486 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AKQMDFRAN 9 AKQM+F N Sbjct: 371 AKQMEFLCN 379>XP_005246642 Length = 487 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AKQMDFRAN 9 AKQM+F N Sbjct: 372 AKQMEFLCN 380>XP_005246641 Length = 487 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AKQMDFRAN 9 AKQM+F N Sbjct: 372 AKQMEFLCN 380>XP_005246640 Length = 487 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AKQMDFRAN 9 AKQM+F N Sbjct: 372 AKQMEFLCN 380>XP_005246638 Length = 487 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AKQMDFRAN 9 AKQM+F N Sbjct: 372 AKQMEFLCN 380>XP_005246639 Length = 487 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AKQMDFRAN 9 AKQM+F N Sbjct: 372 AKQMEFLCN 380>XP_005246636 Length = 487 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AKQMDFRAN 9 AKQM+F N Sbjct: 372 AKQMEFLCN 380>XP_005246637 Length = 487 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AKQMDFRAN 9 AKQM+F N Sbjct: 372 AKQMEFLCN 380>XP_006712603 Length = 487 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AKQMDFRAN 9 AKQM+F N Sbjct: 372 AKQMEFLCN 380>NP_001008844 Length = 2272 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 KQMDFR 7 KQ+DFR Sbjct: 872 KQIDFR 877>NP_004406 Length = 2871 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 KQMDFR 7 KQ+DFR Sbjct: 872 KQIDFR 877>NP_067047 Length = 2506 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KQMDFRAN 9 K DF+AN Sbjct: 1215 KHRDFKAN 1222>NP_065689 Length = 251 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 MDFRAN 9 MDFR N Sbjct: 96 MDFRGN 101>XP_006717280 Length = 2221 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KQMDFRAN 9 K DF+AN Sbjct: 1215 KHRDFKAN 1222>XP_006717279 Length = 2506 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KQMDFRAN 9 K DF+AN Sbjct: 1215 KHRDFKAN 1222>XP_006717278 Length = 2566 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KQMDFRAN 9 K DF+AN Sbjct: 1215 KHRDFKAN 1222>XP_006717277 Length = 2567 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KQMDFRAN 9 K DF+AN Sbjct: 1215 KHRDFKAN 1222>XP_006717276 Length = 2567 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KQMDFRAN 9 K DF+AN Sbjct: 1215 KHRDFKAN 1222>XP_006717275 Length = 2567 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KQMDFRAN 9 K DF+AN Sbjct: 1215 KHRDFKAN 1222>XP_006717274 Length = 2567 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KQMDFRAN 9 K DF+AN Sbjct: 1215 KHRDFKAN 1222>XP_006717273 Length = 2567 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KQMDFRAN 9 K DF+AN Sbjct: 1215 KHRDFKAN 1222>XP_006717272 Length = 2567 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KQMDFRAN 9 K DF+AN Sbjct: 1215 KHRDFKAN 1222Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.326 0.125 0.345 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 416,051 Number of extensions: 466 Number of successful extensions: 33 Number of sequences better than 10000.0: 33 Number of HSP's gapped: 33 Number of HSP's successfully gapped: 33 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |