Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001895 19 869 NP_001091680 19 869 NP_001091679 19 869 XP_006713048 19 869 XP_006713047 19 869 XP_006713046 19 869 XP_005264943 19 869 NP_002221 17 4312 NP_068831 17 4312 XP_006721941 17 4312 XP_006721940 17 4312 XP_006721939 17 4312 XP_006721938 17 4312 XP_006721937 17 4312 XP_006721936 17 4312 XP_006721935 17 4312 XP_006721934 17 4312 XP_005257370 17 4312 NP_001449 16 5631 NP_001120959 16 5631 NP_002806 16 5631 NP_001257411 16 5631 XP_006715973 16 5631 NP_653272 16 7355 NP_001171468 16 7355 NP_001171467 16 7355 XP_006719320 16 7355 NP_006438 15 9605 NP_001001992 15 9605 NP_821133 15 9605 NP_001027582 15 9605>NP_001895 Length = 781 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AKMAVRFAG 9 AKMAVR AG Sbjct: 269 AKMAVRLAG 277>NP_001091680 Length = 781 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AKMAVRFAG 9 AKMAVR AG Sbjct: 269 AKMAVRLAG 277>NP_001091679 Length = 781 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AKMAVRFAG 9 AKMAVR AG Sbjct: 269 AKMAVRLAG 277>XP_006713048 Length = 720 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AKMAVRFAG 9 AKMAVR AG Sbjct: 269 AKMAVRLAG 277>XP_006713047 Length = 774 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AKMAVRFAG 9 AKMAVR AG Sbjct: 262 AKMAVRLAG 270>XP_006713046 Length = 774 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AKMAVRFAG 9 AKMAVR AG Sbjct: 262 AKMAVRLAG 270>XP_005264943 Length = 781 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AKMAVRFAG 9 AKMAVR AG Sbjct: 269 AKMAVRLAG 277>NP_002221 Length = 745 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 AKMAVRFA 8 AKMAVR A Sbjct: 260 AKMAVRLA 267>NP_068831 Length = 745 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 AKMAVRFA 8 AKMAVR A Sbjct: 260 AKMAVRLA 267>XP_006721941 Length = 745 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 AKMAVRFA 8 AKMAVR A Sbjct: 260 AKMAVRLA 267>XP_006721940 Length = 745 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 AKMAVRFA 8 AKMAVR A Sbjct: 260 AKMAVRLA 267>XP_006721939 Length = 745 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 AKMAVRFA 8 AKMAVR A Sbjct: 260 AKMAVRLA 267>XP_006721938 Length = 745 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 AKMAVRFA 8 AKMAVR A Sbjct: 260 AKMAVRLA 267>XP_006721937 Length = 745 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 AKMAVRFA 8 AKMAVR A Sbjct: 260 AKMAVRLA 267>XP_006721936 Length = 745 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 AKMAVRFA 8 AKMAVR A Sbjct: 260 AKMAVRLA 267>XP_006721935 Length = 762 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 AKMAVRFA 8 AKMAVR A Sbjct: 277 AKMAVRLA 284>XP_006721934 Length = 783 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 AKMAVRFA 8 AKMAVR A Sbjct: 298 AKMAVRLA 305>XP_005257370 Length = 783 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 AKMAVRFA 8 AKMAVR A Sbjct: 298 AKMAVRLA 305>NP_001449 Length = 2725 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AKMAVRFAG 9 AK+ V+FAG Sbjct: 900 AKLDVQFAG 908>NP_001120959 Length = 2692 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AKMAVRFAG 9 AK+ V+FAG Sbjct: 900 AKLDVQFAG 908>NP_002806 Length = 422 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KMAVRFAG 9 K+A+R+AG Sbjct: 274 KLALRYAG 281>NP_001257411 Length = 422 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KMAVRFAG 9 K+A+R+AG Sbjct: 274 KLALRYAG 281>XP_006715973 Length = 2632 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AKMAVRFAG 9 AK+ V+FAG Sbjct: 900 AKLDVQFAG 908>NP_653272 Length = 249 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 AVRFAG 9 AVRFAG Sbjct: 80 AVRFAG 85>NP_001171468 Length = 249 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 AVRFAG 9 AVRFAG Sbjct: 80 AVRFAG 85>NP_001171467 Length = 262 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 AVRFAG 9 AVRFAG Sbjct: 93 AVRFAG 98>XP_006719320 Length = 249 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 AVRFAG 9 AVRFAG Sbjct: 80 AVRFAG 85>NP_006438 Length = 823 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KMAVRFAG 9 K AVRF G Sbjct: 287 KKAVRFKG 294>NP_001001992 Length = 822 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KMAVRFAG 9 K AVRF G Sbjct: 286 KKAVRFKG 293>NP_821133 Length = 444 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KMAVRFAG 9 KMAV F G Sbjct: 362 KMAVTFIG 369>NP_001027582 Length = 823 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KMAVRFAG 9 K AVRF G Sbjct: 287 KKAVRFKG 294Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.336 0.134 0.370 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 240,459 Number of extensions: 171 Number of successful extensions: 31 Number of sequences better than 10000.0: 31 Number of HSP's gapped: 31 Number of HSP's successfully gapped: 31 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |