Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_066124 21 229 XP_006717999 21 229 NP_037375 17 3301 NP_001268357 16 7355 NP_036276 16 7355 NP_000030 16 7355 NP_612388 16 7355 NP_001140198 16 7355 NP_115813 16 7355 NP_068570 16 7355 NP_851564 16 7355 NP_851565 16 7355 NP_057573 16 7355 NP_055454 16 7355 NP_065798 16 7355 NP_001159590 16 7355 NP_001002010 16 7355 NP_001002009 16 7355 XP_005271597 16 7355 XP_005271596 16 7355 XP_006716821 16 7355 XP_006716820 16 7355 XP_006716819 16 7355 XP_006716818 16 7355 XP_005272096 16 7355 XP_006714725 16 7355 XP_005272095 16 7355 XP_005272094 16 7355 XP_005271331 16 7355 XP_006711040 16 7355 XP_006711039 16 7355 NP_001005199 16 7355 NP_055559 15 9605 NP_001127853 15 9605 NP_002444 15 9605 NP_001005369 15 9605 NP_940876 15 9605 NP_620591 15 9605 XP_005252935 15 9605 XP_005252905 15 9605 XP_005252904 15 9605 XP_006718180 15 9605 XP_005252777 15 9605 XP_005252776 15 9605 XP_005265673 15 9605 XP_005265672 15 9605 XP_005265671 15 9605 XP_005265670 15 9605 XP_005265669 15 9605 XP_006713493 15 9605 XP_006713492 15 9605 XP_005265668 15 9605 XP_006712087 15 9605 XP_005264392 15 9605 XP_006712086 15 9605 NP_036326 15 9605>NP_066124 Length = 1114 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AKLMDTYDS 9 AKLMDT+DS Sbjct: 1106 AKLMDTFDS 1114>XP_006717999 Length = 1207 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AKLMDTYDS 9 AKLMDT+DS Sbjct: 1199 AKLMDTFDS 1207>NP_037375 Length = 468 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KLMDTYDS 9 KL+D YDS Sbjct: 115 KLIDDYDS 122>NP_001268357 Length = 703 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 AKLMDTYDS 9 ++ +DTYD+ Sbjct: 534 SQFLDTYDA 542>NP_036276 Length = 699 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 AKLMDTYDS 9 ++ +DTYD+ Sbjct: 530 SQFLDTYDA 538>NP_000030 Length = 267 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KLMDTYDS 9 KL+D +DS Sbjct: 69 KLLDNWDS 76>NP_612388 Length = 378 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KLMDTYDS 9 KLM+TY S Sbjct: 339 KLMETYCS 346>NP_001140198 Length = 350 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KLMDTYDS 9 KLM+TY S Sbjct: 311 KLMETYCS 318>NP_115813 Length = 629 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AKLMDTYDS 9 AK+MD Y++ Sbjct: 542 AKVMDGYEN 550>NP_068570 Length = 538 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MDTYDS 9 MDT+DS Sbjct: 487 MDTFDS 492>NP_851564 Length = 538 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MDTYDS 9 MDT+DS Sbjct: 487 MDTFDS 492>NP_851565 Length = 560 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MDTYDS 9 MDT+DS Sbjct: 509 MDTFDS 514>NP_057573 Length = 297 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KLMDTYD 8 K MD+YD Sbjct: 271 KYMDSYD 277>NP_055454 Length = 1564 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KLMDTYDS 9 KL+D Y+S Sbjct: 102 KLLDLYES 109>NP_065798 Length = 1512 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MDTYDS 9 +DTYDS Sbjct: 17 VDTYDS 22>NP_001159590 Length = 285 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KLMDTYD 8 K MD+YD Sbjct: 259 KYMDSYD 265>NP_001002010 Length = 336 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KLMDTYD 8 K MD+YD Sbjct: 310 KYMDSYD 316>NP_001002009 Length = 297 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KLMDTYD 8 K MD+YD Sbjct: 271 KYMDSYD 277>XP_005271597 Length = 267 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KLMDTYDS 9 KL+D +DS Sbjct: 69 KLLDNWDS 76>XP_005271596 Length = 267 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KLMDTYDS 9 KL+D +DS Sbjct: 69 KLLDNWDS 76>XP_006716821 Length = 522 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 AKLMDTYDS 9 ++ +DTYD+ Sbjct: 353 SQFLDTYDA 361>XP_006716820 Length = 673 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 AKLMDTYDS 9 ++ +DTYD+ Sbjct: 565 SQFLDTYDA 573>XP_006716819 Length = 730 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 AKLMDTYDS 9 ++ +DTYD+ Sbjct: 561 SQFLDTYDA 569>XP_006716818 Length = 734 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 AKLMDTYDS 9 ++ +DTYD+ Sbjct: 565 SQFLDTYDA 573>XP_005272096 Length = 1511 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MDTYDS 9 +DTYDS Sbjct: 17 VDTYDS 22>XP_006714725 Length = 1512 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MDTYDS 9 +DTYDS Sbjct: 17 VDTYDS 22>XP_005272095 Length = 1512 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MDTYDS 9 +DTYDS Sbjct: 17 VDTYDS 22>XP_005272094 Length = 1512 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MDTYDS 9 +DTYDS Sbjct: 17 VDTYDS 22>XP_005271331 Length = 606 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AKLMDTYDS 9 AK+MD Y++ Sbjct: 542 AKVMDGYEN 550>XP_006711040 Length = 629 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AKLMDTYDS 9 AK+MD Y++ Sbjct: 542 AKVMDGYEN 550>XP_006711039 Length = 642 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AKLMDTYDS 9 AK+MD Y++ Sbjct: 555 AKVMDGYEN 563>NP_001005199 Length = 311 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 MDTYD 8 MDTYD Sbjct: 189 MDTYD 193>NP_055559 Length = 795 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AKLMDTY 7 AK+MDT+ Sbjct: 610 AKVMDTH 616>NP_001127853 Length = 817 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AKLMDTY 7 AK+MDT+ Sbjct: 632 AKVMDTH 638>NP_002444 Length = 727 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 LMDTYDS 9 ++DTYD+ Sbjct: 534 IIDTYDA 540>NP_001005369 Length = 727 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 LMDTYDS 9 ++DTYD+ Sbjct: 534 IIDTYDA 540>NP_940876 Length = 402 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KLMDTYDS 9 K+MDT+ S Sbjct: 156 KMMDTHGS 163>NP_620591 Length = 320 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 LMDTYD 8 ++DTYD Sbjct: 123 MLDTYD 128>XP_005252935 Length = 402 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KLMDTYDS 9 K+MDT+ S Sbjct: 156 KMMDTHGS 163>XP_005252905 Length = 1854 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 MDTYDS 9 MD YDS Sbjct: 379 MDVYDS 384>XP_005252904 Length = 1855 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 MDTYDS 9 MD YDS Sbjct: 379 MDVYDS 384>XP_006718180 Length = 189 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 LMDTYD 8 ++DTYD Sbjct: 158 MLDTYD 163>XP_005252777 Length = 283 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 LMDTYD 8 ++DTYD Sbjct: 158 MLDTYD 163>XP_005252776 Length = 378 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 LMDTYD 8 ++DTYD Sbjct: 158 MLDTYD 163>XP_005265673 Length = 681 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AKLMDTY 7 AK+MDT+ Sbjct: 496 AKVMDTH 502>XP_005265672 Length = 681 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AKLMDTY 7 AK+MDT+ Sbjct: 496 AKVMDTH 502>XP_005265671 Length = 795 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AKLMDTY 7 AK+MDT+ Sbjct: 610 AKVMDTH 616>XP_005265670 Length = 817 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AKLMDTY 7 AK+MDT+ Sbjct: 632 AKVMDTH 638>XP_005265669 Length = 817 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AKLMDTY 7 AK+MDT+ Sbjct: 632 AKVMDTH 638>XP_006713493 Length = 817 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AKLMDTY 7 AK+MDT+ Sbjct: 632 AKVMDTH 638>XP_006713492 Length = 817 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AKLMDTY 7 AK+MDT+ Sbjct: 632 AKVMDTH 638>XP_005265668 Length = 817 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AKLMDTY 7 AK+MDT+ Sbjct: 632 AKVMDTH 638>XP_006712087 Length = 484 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 LMDTYDS 9 ++DTYD+ Sbjct: 291 IIDTYDA 297>XP_005264392 Length = 727 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 LMDTYDS 9 ++DTYD+ Sbjct: 534 IIDTYDA 540>XP_006712086 Length = 727 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 LMDTYDS 9 ++DTYD+ Sbjct: 534 IIDTYDA 540>NP_036326 Length = 1849 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 MDTYDS 9 MD YDS Sbjct: 379 MDVYDS 384Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.310 0.122 0.326 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 477,254 Number of extensions: 628 Number of successful extensions: 56 Number of sequences better than 10000.0: 56 Number of HSP's gapped: 56 Number of HSP's successfully gapped: 56 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |