Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005219 19 665 NP_060633 17 3301 NP_919268 17 3301 NP_066566 17 4312 NP_004565 17 4312 NP_536340 17 4312 NP_536341 17 4312 NP_001243711 17 4312 NP_001185642 17 4312 NP_001243751 17 4312 XP_006722018 17 4312 XP_006722017 17 4312 XP_006722016 17 4312 XP_006722015 17 4312 XP_006722014 17 4312 XP_006722013 17 4312 XP_006722012 17 4312 NP_001073953 16 5631 NP_443087 16 5631 NP_955452 16 5631 XP_006714108 16 5631 XP_005265813 16 5631 XP_005265812 16 5631 XP_005265811 16 5631 XP_006714107 16 5631 XP_005265809 16 5631 XP_006713543 16 5631 XP_006711061 16 5631 XP_006711060 16 5631 XP_005244868 16 5631 NP_065773 16 5631 NP_079330 16 7355 XP_005250316 16 7355 NP_036304 16 7355 NP_001156971 16 7355 NP_277041 16 7355 NP_001231800 15 9605 NP_001334 15 9605 NP_001274433 15 9605 NP_775899 15 9605 XP_006716232 15 9605 XP_006716231 15 9605 XP_005246870 15 9605 XP_005246869 15 9605 NP_001123917 15 9605 NP_001274432 15 9605 NP_006742 15 9605>NP_005219 Length = 1210 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AKLLGVEEK 9 AKLLG EEK Sbjct: 859 AKLLGAEEK 867>NP_060633 Length = 304 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LLGVEEK 9 LLG+EEK Sbjct: 15 LLGIEEK 21>NP_919268 Length = 657 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AKLLGVEEK 9 AKL GVEE+ Sbjct: 280 AKLSGVEEE 288>NP_066566 Length = 555 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AKLLGVEE 8 AKL+G++E Sbjct: 44 AKLIGIDE 51>NP_004565 Length = 478 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KLLGVEEK 9 KLLG EE+ Sbjct: 174 KLLGAEER 181>NP_536340 Length = 274 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KLLGVEEK 9 KLLG EE+ Sbjct: 155 KLLGAEER 162>NP_536341 Length = 459 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KLLGVEEK 9 KLLG EE+ Sbjct: 155 KLLGAEER 162>NP_001243711 Length = 493 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KLLGVEEK 9 KLLG EE+ Sbjct: 189 KLLGAEER 196>NP_001185642 Length = 470 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KLLGVEEK 9 KLLG EE+ Sbjct: 166 KLLGAEER 173>NP_001243751 Length = 331 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KLLGVEEK 9 KLLG EE+ Sbjct: 27 KLLGAEER 34>XP_006722018 Length = 331 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KLLGVEEK 9 KLLG EE+ Sbjct: 27 KLLGAEER 34>XP_006722017 Length = 331 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KLLGVEEK 9 KLLG EE+ Sbjct: 27 KLLGAEER 34>XP_006722016 Length = 331 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KLLGVEEK 9 KLLG EE+ Sbjct: 27 KLLGAEER 34>XP_006722015 Length = 360 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KLLGVEEK 9 KLLG EE+ Sbjct: 56 KLLGAEER 63>XP_006722014 Length = 379 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KLLGVEEK 9 KLLG EE+ Sbjct: 75 KLLGAEER 82>XP_006722013 Length = 384 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KLLGVEEK 9 KLLG EE+ Sbjct: 80 KLLGAEER 87>XP_006722012 Length = 483 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KLLGVEEK 9 KLLG EE+ Sbjct: 179 KLLGAEER 186>NP_001073953 Length = 762 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KLLGVEE 8 KL+GVEE Sbjct: 550 KLVGVEE 556>NP_443087 Length = 368 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KLLGVEEK 9 K++GVEE+ Sbjct: 91 KIMGVEEE 98>NP_955452 Length = 2590 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AKLLGVEE 8 A+L+GVEE Sbjct: 684 AELVGVEE 691>XP_006714108 Length = 1119 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LLGVEEK 9 LLG+EEK Sbjct: 507 LLGLEEK 513>XP_005265813 Length = 1143 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LLGVEEK 9 LLG+EEK Sbjct: 531 LLGLEEK 537>XP_005265812 Length = 1151 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LLGVEEK 9 LLG+EEK Sbjct: 539 LLGLEEK 545>XP_005265811 Length = 1175 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LLGVEEK 9 LLG+EEK Sbjct: 563 LLGLEEK 569>XP_006714107 Length = 1233 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LLGVEEK 9 LLG+EEK Sbjct: 621 LLGLEEK 627>XP_005265809 Length = 1233 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LLGVEEK 9 LLG+EEK Sbjct: 621 LLGLEEK 627>XP_006713543 Length = 2591 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AKLLGVEE 8 A+L+GVEE Sbjct: 685 AELVGVEE 692>XP_006711061 Length = 1553 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KLLGVEE 8 KL+GVEE Sbjct: 464 KLVGVEE 470>XP_006711060 Length = 1595 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KLLGVEE 8 KL+GVEE Sbjct: 506 KLVGVEE 512>XP_005244868 Length = 1639 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KLLGVEE 8 KL+GVEE Sbjct: 550 KLVGVEE 556>NP_065773 Length = 1233 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LLGVEEK 9 LLG+EEK Sbjct: 621 LLGLEEK 627>NP_079330 Length = 1222 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KLLGVEE 8 +LLGVEE Sbjct: 81 QLLGVEE 87>XP_005250316 Length = 561 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LGVEEK 9 LGVEEK Sbjct: 63 LGVEEK 68>NP_036304 Length = 618 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LGVEEK 9 LGVEEK Sbjct: 63 LGVEEK 68>NP_001156971 Length = 568 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LGVEEK 9 LGVEEK Sbjct: 13 LGVEEK 18>NP_277041 Length = 580 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LGVEEK 9 LGVEEK Sbjct: 25 LGVEEK 30>NP_001231800 Length = 749 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 AKLLGVEE 8 AKL+G+++ Sbjct: 52 AKLIGIDD 59>NP_001334 Length = 770 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 AKLLGVEE 8 AKL+G+++ Sbjct: 52 AKLIGIDD 59>NP_001274433 Length = 1084 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KLLGVEEK 9 +LLG+EE+ Sbjct: 872 RLLGLEEQ 879>NP_775899 Length = 4462 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AKLLGVEE 8 +KL+G EE Sbjct: 28 SKLIGAEE 35>XP_006716232 Length = 2753 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KLLGVEE 8 K+LG+EE Sbjct: 1799 KILGMEE 1805>XP_006716231 Length = 2753 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KLLGVEE 8 K+LG+EE Sbjct: 1799 KILGMEE 1805>XP_005246870 Length = 1252 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KLLGVEEK 9 +LLG+EE+ Sbjct: 1025 RLLGLEEQ 1032>XP_005246869 Length = 1255 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KLLGVEEK 9 +LLG+EE+ Sbjct: 1025 RLLGLEEQ 1032>NP_001123917 Length = 1259 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KLLGVEEK 9 +LLG+EE+ Sbjct: 1025 RLLGLEEQ 1032>NP_001274432 Length = 1237 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KLLGVEEK 9 +LLG+EE+ Sbjct: 1025 RLLGLEEQ 1032>NP_006742 Length = 1256 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KLLGVEEK 9 +LLG+EE+ Sbjct: 1025 RLLGLEEQ 1032Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.303 0.131 0.315 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 693,860 Number of extensions: 1233 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |