Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001261 19 869 XP_005271924 19 869 XP_005271923 19 869 NP_001171313 17 4312 NP_003130 17 4312 NP_059107 16 5631 NP_075013 16 5631 NP_075014 16 5631 NP_000335 16 5631 NP_075015 16 5631 NP_075012 16 5631 NP_001191676 16 5631 NP_002904 16 5631 XP_005248632 16 5631 XP_005276832 16 5631 XP_006714740 16 5631 NP_060800 16 7355 NP_001120683 16 7355 NP_001245227 16 7355 NP_001245228 16 7355 NP_001245229 16 7355 XP_005270059 16 7355 XP_006717994 16 7355 NP_002878 15 9605>NP_001261 Length = 1710 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AKKNKATKS 9 AKKNKA KS Sbjct: 1336 AKKNKAMKS 1344>XP_005271924 Length = 1710 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AKKNKATKS 9 AKKNKA KS Sbjct: 1336 AKKNKAMKS 1344>XP_005271923 Length = 1798 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AKKNKATKS 9 AKKNKA KS Sbjct: 1336 AKKNKAMKS 1344>NP_001171313 Length = 610 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KKNKATKS 9 K NK+TKS Sbjct: 199 KSNKSTKS 206>NP_003130 Length = 638 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KKNKATKS 9 K NK+TKS Sbjct: 227 KSNKSTKS 234>NP_059107 Length = 294 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AKKNKATK 8 AKKNK+ K Sbjct: 75 AKKNKSQK 82>NP_075013 Length = 282 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AKKNKATK 8 AKKNK+ K Sbjct: 75 AKKNKSQK 82>NP_075014 Length = 262 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AKKNKATK 8 AKKNK+ K Sbjct: 75 AKKNKSQK 82>NP_000335 Length = 294 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AKKNKATK 8 AKKNK+ K Sbjct: 75 AKKNKSQK 82>NP_075015 Length = 250 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AKKNKATK 8 AKKNK+ K Sbjct: 75 AKKNKSQK 82>NP_075012 Length = 262 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AKKNKATK 8 AKKNK+ K Sbjct: 75 AKKNKSQK 82>NP_001191676 Length = 1148 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KKNKATKS 9 KKN+ TKS Sbjct: 22 KKNEKTKS 29>NP_002904 Length = 1147 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KKNKATKS 9 KKN+ TKS Sbjct: 22 KKNEKTKS 29>XP_005248632 Length = 282 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AKKNKATK 8 AKKNK+ K Sbjct: 75 AKKNKSQK 82>XP_005276832 Length = 282 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AKKNKATK 8 AKKNK+ K Sbjct: 75 AKKNKSQK 82>XP_006714740 Length = 282 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AKKNKATK 8 AKKNK+ K Sbjct: 75 AKKNKSQK 82>NP_060800 Length = 456 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AKKNKATK 8 AKK KAT+ Sbjct: 388 AKKEKATQ 395>NP_001120683 Length = 631 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AKKNKATK 8 AKK KAT+ Sbjct: 388 AKKEKATQ 395>NP_001245227 Length = 571 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AKKNKATK 8 AKK KAT+ Sbjct: 328 AKKEKATQ 335>NP_001245228 Length = 558 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AKKNKATK 8 AKK KAT+ Sbjct: 388 AKKEKATQ 395>NP_001245229 Length = 498 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AKKNKATK 8 AKK KAT+ Sbjct: 328 AKKEKATQ 335>XP_005270059 Length = 573 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AKKNKATK 8 AKK KAT+ Sbjct: 388 AKKEKATQ 395>XP_006717994 Length = 617 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AKKNKATK 8 AKK KAT+ Sbjct: 388 AKKEKATQ 395>NP_002878 Length = 660 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AKKNKATKS 9 A++NK TK+ Sbjct: 64 AERNKPTKN 72Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.278 0.0910 0.202 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 391,402 Number of extensions: 454 Number of successful extensions: 24 Number of sequences better than 10000.0: 24 Number of HSP's gapped: 24 Number of HSP's successfully gapped: 24 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 18 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |