Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_064450 19 869 XP_005273257 19 869 NP_060500 17 4312 NP_001229437 17 4312 NP_542164 17 4312 NP_001273553 17 4312 NP_001273548 17 4312 NP_064537 17 4312 NP_001273563 17 4312 NP_001273547 17 4312 NP_001273546 17 4312 NP_001273551 17 4312 NP_001273549 17 4312 XP_006722446 17 4312 XP_006722445 17 4312 XP_006722444 17 4312 XP_006722443 17 4312 XP_006712843 16 5631 XP_005264079 16 5631 XP_005254804 16 7355 XP_006720791 16 7355 XP_005254803 16 7355 XP_005254800 16 7355 XP_005254799 16 7355 NP_003913 16 7355 NP_000032 15 9605 NP_115627 15 9605 NP_001258029 15 9605 NP_001129505 15 9605 NP_055096 15 9605 NP_510965 15 9605 NP_001258028 15 9605 NP_001258026 15 9605 NP_001660 15 9605 NP_001258025 15 9605 NP_001258027 15 9605 XP_005274573 15 9605 XP_005274572 15 9605 XP_005274571 15 9605 XP_005258924 15 9605 XP_005268640 15 9605 XP_006718583 15 9605 XP_006718582 15 9605 XP_006712788 15 9605 XP_006712786 15 9605 NP_006829 15 9605 NP_001254479 15 9605>NP_064450 Length = 1722 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AKIDQAAEE 9 AKIDQ AEE Sbjct: 1620 AKIDQEAEE 1628>XP_005273257 Length = 1726 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AKIDQAAEE 9 AKIDQ AEE Sbjct: 1624 AKIDQEAEE 1632>NP_060500 Length = 437 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KIDQAAEE 9 +IDQA+EE Sbjct: 372 EIDQASEE 379>NP_001229437 Length = 568 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KIDQAAEE 9 +IDQA+EE Sbjct: 503 EIDQASEE 510>NP_542164 Length = 950 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KIDQAAEE 9 +IDQA+EE Sbjct: 885 EIDQASEE 892>NP_001273553 Length = 87 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AKIDQAAEE 9 AK+DQA +E Sbjct: 33 AKLDQAEKE 41>NP_001273548 Length = 142 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AKIDQAAEE 9 AK+DQA +E Sbjct: 88 AKLDQAEKE 96>NP_064537 Length = 242 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AKIDQAAEE 9 AK+DQA +E Sbjct: 188 AKLDQAEKE 196>NP_001273563 Length = 242 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AKIDQAAEE 9 AK+DQA +E Sbjct: 188 AKLDQAEKE 196>NP_001273547 Length = 142 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AKIDQAAEE 9 AK+DQA +E Sbjct: 88 AKLDQAEKE 96>NP_001273546 Length = 142 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AKIDQAAEE 9 AK+DQA +E Sbjct: 88 AKLDQAEKE 96>NP_001273551 Length = 136 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AKIDQAAEE 9 AK+DQA +E Sbjct: 82 AKLDQAEKE 90>NP_001273549 Length = 142 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AKIDQAAEE 9 AK+DQA +E Sbjct: 88 AKLDQAEKE 96>XP_006722446 Length = 889 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KIDQAAEE 9 +IDQA+EE Sbjct: 824 EIDQASEE 831>XP_006722445 Length = 905 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KIDQAAEE 9 +IDQA+EE Sbjct: 840 EIDQASEE 847>XP_006722444 Length = 914 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KIDQAAEE 9 +IDQA+EE Sbjct: 849 EIDQASEE 856>XP_006722443 Length = 925 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KIDQAAEE 9 +IDQA+EE Sbjct: 860 EIDQASEE 867>XP_006712843 Length = 891 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KIDQAAEE 9 KIDQ AE+ Sbjct: 112 KIDQLAEQ 119>XP_005264079 Length = 893 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KIDQAAEE 9 KIDQ AE+ Sbjct: 107 KIDQLAEQ 114>XP_005254804 Length = 4796 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KIDQAAEE 9 +IDQ AEE Sbjct: 2551 EIDQQAEE 2558>XP_006720791 Length = 4853 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KIDQAAEE 9 +IDQ AEE Sbjct: 2608 EIDQQAEE 2615>XP_005254803 Length = 4854 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KIDQAAEE 9 +IDQ AEE Sbjct: 2616 EIDQQAEE 2623>XP_005254800 Length = 4861 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KIDQAAEE 9 +IDQ AEE Sbjct: 2616 EIDQQAEE 2623>XP_005254799 Length = 4861 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KIDQAAEE 9 +IDQ AEE Sbjct: 2616 EIDQQAEE 2623>NP_003913 Length = 4861 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KIDQAAEE 9 +IDQ AEE Sbjct: 2616 EIDQQAEE 2623>NP_000032 Length = 317 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AKIDQAAE 8 AK++QA E Sbjct: 18 AKVEQAVE 25>NP_115627 Length = 1476 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KIDQAAEE 9 ++DQ AEE Sbjct: 411 QVDQLAEE 418>NP_001258029 Length = 499 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 IDQAAEE 9 IDQ AEE Sbjct: 155 IDQLAEE 161>NP_001129505 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 IDQAAEE 9 IDQ AEE Sbjct: 172 IDQLAEE 178>NP_055096 Length = 542 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 IDQAAEE 9 IDQ AEE Sbjct: 198 IDQLAEE 204>NP_510965 Length = 559 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 IDQAAEE 9 IDQ AEE Sbjct: 215 IDQLAEE 221>NP_001258028 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 IDQAAEE 9 IDQ AEE Sbjct: 186 IDQLAEE 192>NP_001258026 Length = 513 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 IDQAAEE 9 IDQ AEE Sbjct: 169 IDQLAEE 175>NP_001660 Length = 593 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 IDQAAEE 9 IDQ AEE Sbjct: 69 IDQLAEE 75>NP_001258025 Length = 541 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 IDQAAEE 9 IDQ AEE Sbjct: 197 IDQLAEE 203>NP_001258027 Length = 558 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 IDQAAEE 9 IDQ AEE Sbjct: 214 IDQLAEE 220>XP_005274573 Length = 382 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 IDQAAEE 9 IDQ AEE Sbjct: 69 IDQLAEE 75>XP_005274572 Length = 475 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 IDQAAEE 9 IDQ AEE Sbjct: 69 IDQLAEE 75>XP_005274571 Length = 548 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 IDQAAEE 9 IDQ AEE Sbjct: 69 IDQLAEE 75>XP_005258924 Length = 343 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AKIDQAAE 8 AK++QA E Sbjct: 44 AKVEQAVE 51>XP_005268640 Length = 477 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IDQAAEE 9 +DQA+EE Sbjct: 157 LDQASEE 163>XP_006718583 Length = 1482 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KIDQAAEE 9 ++DQ AEE Sbjct: 333 QVDQLAEE 340>XP_006718582 Length = 1560 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KIDQAAEE 9 ++DQ AEE Sbjct: 411 QVDQLAEE 418>XP_006712788 Length = 24022 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AKIDQAAEE 9 AK+ +AA+E Sbjct: 321 AKVPEAAQE 329Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AKIDQAAEE 9 AK+ +AA+E Sbjct: 572 AKVPEAAQE 580Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AKIDQAAEE 9 AK+ +AA+E Sbjct: 823 AKVPEAAQE 831>XP_006712786 Length = 35484 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AKIDQAAEE 9 AK+ +AA+E Sbjct: 11783 AKVPEAAQE 11791Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AKIDQAAEE 9 AK+ +AA+E Sbjct: 12034 AKVPEAAQE 12042Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AKIDQAAEE 9 AK+ +AA+E Sbjct: 12285 AKVPEAAQE 12293>NP_006829 Length = 478 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IDQAAEE 9 +DQA+EE Sbjct: 158 LDQASEE 164>NP_001254479 Length = 35991 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AKIDQAAEE 9 AK+ +AA+E Sbjct: 12290 AKVPEAAQE 12298Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AKIDQAAEE 9 AK+ +AA+E Sbjct: 12541 AKVPEAAQE 12549Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AKIDQAAEE 9 AK+ +AA+E Sbjct: 12792 AKVPEAAQE 12800Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.292 0.110 0.249 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 329,500 Number of extensions: 513 Number of successful extensions: 53 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 53 Number of HSP's successfully gapped: 53 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.0 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |